RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 CLCN1P35523 988 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 PPP3CCP48454 512 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 GPR15P49685 360 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 JAM2P57087 298 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 NTHL1P78549 312 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 ZP2Q05996 745 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 ORC1Q13415 861 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 DRAP1Q14919 205 aaPredicted RBP10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 SLC5A9Q2M3M2 681 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 CYP4A22Q5TCH4 519 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 CLEC20AQ6ZU45 233 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 DENND5BQ6ZUT9 1274 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 GAREM2Q75VX8 874 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 OTOP3Q7RTS5 596 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 TMEM150AQ86TG1 271 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 SCN4BQ8IWT1 228 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 ZDHHC14Q8IZN3 488 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 HS6ST3Q8IZP7 471 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 NUP93Q8N1F7 819 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 PLCD3Q8N3E9 789 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 TFAP2BQ92481 460 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 NAP1L5Q96NT1 182 aaPredicted RBP10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 KCNK16Q96T55 309 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 CORO1BQ9BR76 489 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 ANP32EQ9BTT0 268 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 MED10Q9BTT4 135 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 LSM14BQ9BX40 385 aaKnown RBP10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 ZNF334Q9HCZ1 680 aaPredicted RBP10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 FAM49BQ9NUQ9 324 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 EPS15L1Q9UBC2 864 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 ZMYM5Q9UJ78 669 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 AJAP1Q9UKB5 411 aaPredicted RBP10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 FHOD1Q9Y613 1164 aa10.2□□□□□ -0.78
RABGGTA-221ENST00000561055 NCANO14594 1321 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 EPHB6O15197 1021 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 RTN3O95197 1032 aaPredicted RBP10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 SERPINC1P01008 464 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 PFKLP17858 780 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 CDC25CP30307 473 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 PBX1P40424 430 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 CCR2P41597 374 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 KLK7P49862 253 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 CDR1P51861 262 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 UBASH3AP57075 661 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 BPIFB4P59827 614 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 MTMR3Q13615 1198 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 ARHGAP44Q17R89 818 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 FIGNQ5HY92 759 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 RAB41Q5JT25 222 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 SNX30Q5VWJ9 437 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 PDZD4Q76G19 769 aaPredicted RBP10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 SCML4Q8N228 414 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 NEK11Q8NG66 645 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 GPR152Q8TDT2 470 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 GIPC2Q8TF65 315 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 ZNF606Q8WXB4 792 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 OVCA2Q8WZ82 227 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 FGF13Q92913 245 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 NXPE3Q969Y0 559 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 ACSF2Q96CM8 615 aaPredicted RBP10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 ZSWIM1Q9BR11 485 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 EDEM3Q9BZQ6 932 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 KRT82Q9NSB4 513 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 FAM207AQ9NSI2 230 aaPredicted RBP10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 GDE1Q9NZC3 331 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 TSPAN16Q9UKR8 245 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 CDH7Q9ULB5 785 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 MYO6Q9UM54 1294 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 MRPS23Q9Y3D9 190 aaKnown RBP10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 TTC28Q96AY4 2481 aa10.19□□□□□ -0.78
RABGGTA-221ENST00000561055 ANHXE9PGG2 379 aa10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 F8VZ95 297 aa10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 XPO1O14980 1071 aaKnown RBP10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 MED7O43513 233 aa10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 SETSIPP0DME0 302 aa10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 MYL4P12829 197 aa10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 LAMP2P13473 410 aa10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 KRT5P13647 590 aa10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 CD19P15391 556 aa10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 DDX6P26196 483 aaKnown RBP eCLIP10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 GABRR2P28476 465 aa10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 ADORA2BP29275 332 aa10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 RPL34P49207 117 aaKnown RBP10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 KIF11P52732 1056 aa10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 BCAT1P54687 386 aa10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 MAP3K7CLP57077 242 aa10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 SLC8A3P57103 927 aa10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 POLR2FP61218 127 aaKnown RBP10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 PTK2Q05397 1052 aa10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 BST2Q10589 180 aaKnown RBP10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 TAF12Q16514 161 aa10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 SDHAF4Q5VUM1 108 aa10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 POTEHQ6S545 545 aa10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 TTC30AQ86WT1 665 aa10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 NPAS3Q8IXF0 933 aa10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 ZNF276Q8N554 614 aa10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 ITFG1Q8TB96 612 aa10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 SHKBP1Q8TBC3 707 aa10.18□□□□□ -0.78
RABGGTA-221ENST00000561055 STK32AQ8WU08 396 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms