RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 ADCY1Q08828 1119 aa11.9□□□□□ -0.5
SNX1-212ENST00000560861 MESDQ14696 234 aa11.9□□□□□ -0.5
SNX1-212ENST00000560861 RPS6KA1Q15418 735 aa11.9□□□□□ -0.5
SNX1-212ENST00000560861 RTP2Q5QGT7 225 aa11.9□□□□□ -0.5
SNX1-212ENST00000560861 DCAF12L1Q5VU92 463 aa11.9□□□□□ -0.5
SNX1-212ENST00000560861 FAM171A1Q5VUB5 890 aa11.9□□□□□ -0.5
SNX1-212ENST00000560861 OTOP2Q7RTS6 562 aa11.9□□□□□ -0.5
SNX1-212ENST00000560861 TAS1R1Q7RTX1 841 aa11.9□□□□□ -0.5
SNX1-212ENST00000560861 C7orf61Q8IZ16 206 aa11.9□□□□□ -0.5
SNX1-212ENST00000560861 THEM5Q8N1Q8 247 aa11.9□□□□□ -0.5
SNX1-212ENST00000560861 PIP4P2Q8N4L2 257 aa11.9□□□□□ -0.5
SNX1-212ENST00000560861 HERVK_113Q902F9 699 aa11.9□□□□□ -0.5
SNX1-212ENST00000560861 ALG3Q92685 438 aa11.9□□□□□ -0.5
SNX1-212ENST00000560861 IGSF21Q96ID5 467 aa11.9□□□□□ -0.5
SNX1-212ENST00000560861 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.9□□□□□ -0.51e-8■■■□□ 17.5
SNX1-212ENST00000560861 MIS12Q9H081 205 aa11.9□□□□□ -0.5
SNX1-212ENST00000560861 KRT82Q9NSB4 513 aa11.9□□□□□ -0.5
SNX1-212ENST00000560861 CXXC1Q9P0U4 656 aaPredicted RBP11.9□□□□□ -0.5
SNX1-212ENST00000560861 AMFRQ9UKV5 643 aa11.9□□□□□ -0.5
SNX1-212ENST00000560861 SZT2Q5T011 3432 aa11.9□□□□□ -0.5
SNX1-212ENST00000560861 GREB1Q4ZG55 1949 aa11.9□□□□□ -0.51
SNX1-212ENST00000560861 PLXNA3P51805 1871 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 OR6C75A6NL08 312 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 TMEM110-MUSTN1A8MSY1 372 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 MIF4GDA9UHW6 222 aaKnown RBP11.89□□□□□ -0.51
SNX1-212ENST00000560861 GOLGA8SH3BPF8 625 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 MYO1FO00160 1098 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 DPYSL4O14531 572 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 ZNF185O15231 689 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 AP1G2O75843 785 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 GJB5O95377 273 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 VNN2O95498 520 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 FAM200BP0CF97 657 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 KRT3P12035 628 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 CTNNA1P35221 906 aaKnown RBP11.89□□□□□ -0.51
SNX1-212ENST00000560861 SLC1A1P43005 524 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 ACADSBP45954 432 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 TERF1P54274 439 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 TSPY1Q01534 308 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 SLC6A3Q01959 620 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 MAPRE1Q15691 268 aaKnown RBP11.89□□□□□ -0.51
SNX1-212ENST00000560861 PTPROQ16827 1216 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 RAB41Q5JT25 222 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 RASIP1Q5U651 963 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 PSRC1Q6PGN9 363 aaPredicted RBP11.89□□□□□ -0.51
SNX1-212ENST00000560861 KCNT2Q6UVM3 1135 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 RSPO2Q6UXX9 243 aaPredicted RBP11.89□□□□□ -0.51
SNX1-212ENST00000560861 SLC26A9Q7LBE3 791 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 ARCQ7LC44 396 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 ZDHHC17Q8IUH5 632 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 RASGEF1CQ8N431 466 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 ARFGAP1Q8N6T3 406 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 COLGALT1Q8NBJ5 622 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 MYRIPQ8NFW9 859 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 SP7Q8TDD2 431 aaPredicted RBP11.89□□□□□ -0.51
SNX1-212ENST00000560861 KRT35Q92764 455 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 SMARCD1Q96GM5 515 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 B3GALT6Q96L58 329 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 MCEEQ96PE7 176 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 SELENOOQ9BVL4 669 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 CARD6Q9BX69 1037 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 RHOBTB2Q9BYZ6 727 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 METTL5Q9NRN9 209 aaKnown RBP11.89□□□□□ -0.51
SNX1-212ENST00000560861 CHST7Q9NS84 486 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 IP6K2Q9UHH9 426 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 LCMT1Q9UIC8 334 aa11.89□□□□□ -0.51
SNX1-212ENST00000560861 RANBP2P49792 3224 aaKnown RBP11.88□□□□□ -0.51
SNX1-212ENST00000560861 C2CD4BA6NLJ0 364 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 CTIFO43310 598 aaKnown RBP11.88□□□□□ -0.51
SNX1-212ENST00000560861 TADA3O75528 432 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 SLU7O95391 586 aaKnown RBP11.88□□□□□ -0.51
SNX1-212ENST00000560861 OR4Q2P0C623 313 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 LAG3P18627 525 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 GTF2F1P35269 517 aaKnown RBP eCLIP11.88□□□□□ -0.51
SNX1-212ENST00000560861 FLT3P36888 993 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 TAS2R40P59535 323 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 CFAP221Q4G0U5 840 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 OR6B2Q6IFH4 312 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 ZNF280DQ6N043 979 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 FAM117BQ6P1L5 589 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 BHLHA9Q7RTU4 235 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 GPRIN1Q7Z2K8 1008 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 SCML4Q8N228 414 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 CLEC4CQ8WTT0 213 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 PIK3R5Q8WYR1 880 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 PBKQ96KB5 322 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 ZNF558Q96NG5 402 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 KCNK16Q96T55 309 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 MED10Q9BTT4 135 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 TTPALQ9BTX7 342 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 C11orf84Q9BUA3 381 aaPredicted RBP11.88□□□□□ -0.51
SNX1-212ENST00000560861 HERC2P3Q9BVR0 1158 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 CARD9Q9H257 536 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 SYNCQ9H7C4 482 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 ST7Q9NRC1 585 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 ASNSD1Q9NWL6 643 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 MTRRQ9UBK8 725 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 PRKAG2Q9UGJ0 569 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 PCDHA3Q9Y5H8 950 aa11.88□□□□□ -0.51
SNX1-212ENST00000560861 BACE2Q9Y5Z0 518 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms