RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 F2P00734 622 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 CD4P01730 458 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 GPD1P21695 349 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 KDELR1P24390 212 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 PNPLA4P41247 253 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 ADCYAP1R1P41586 468 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 MAGEA4P43358 317 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 OSTNP61366 133 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 IGBP1P78318 339 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 SLC20A2Q08357 652 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 PDK2Q15119 407 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 ZBTB6Q15916 424 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 MARCH8Q5T0T0 291 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 GKAP1Q5VSY0 366 aaPredicted RBP10.19□□□□□ -0.78
RTF1-206ENST00000560447 ARHGAP17Q68EM7 881 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 NOTUMQ6P988 496 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 C6orf89Q6UWU4 347 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 PHLDB2Q86SQ0 1253 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 MAP7D3Q8IWC1 876 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 TMEM192Q8IY95 271 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 KIAA0319LQ8IZA0 1049 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 ATXN2LQ8WWM7 1075 aaKnown RBP10.19□□□□□ -0.78
RTF1-206ENST00000560447 BRI3BPQ8WY22 251 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 ZBTB9Q96C00 473 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 SNX27Q96L92 541 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 CPXM1Q96SM3 734 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 PLCD4Q9BRC7 762 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 ADAM7Q9H2U9 754 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 ADAMTS10Q9H324 1103 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 SMYD3Q9H7B4 428 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 ACTR5Q9H9F9 607 aaPredicted RBP10.19□□□□□ -0.78
RTF1-206ENST00000560447 INTS9Q9NV88 658 aaKnown RBP10.19□□□□□ -0.78
RTF1-206ENST00000560447 SLC24A2Q9UI40 661 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 DNPEPQ9ULA0 475 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 UBQLN1Q9UMX0 589 aaKnown RBP10.19□□□□□ -0.78
RTF1-206ENST00000560447 VTNP04004 478 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 GJB1P08034 283 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 CHN1P15882 459 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 SMPD1P17405 629 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 CYP3A5P20815 502 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 STIP1P31948 543 aaKnown RBP10.18□□□□□ -0.78
RTF1-206ENST00000560447 CHKAP35790 457 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 GJC1P36383 396 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 ARSEP51690 589 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 NDST1P52848 882 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 ITIH4Q14624 930 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 P3H1Q32P28 736 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 BOLA3Q53S33 107 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 ZC3H12AQ5D1E8 599 aaKnown RBP10.18□□□□□ -0.78
RTF1-206ENST00000560447 RNASEH2BQ5TBB1 312 aaKnown RBP10.18□□□□□ -0.78
RTF1-206ENST00000560447 CYP4A22Q5TCH4 519 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 SPRYD7Q5W111 196 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 PPP1R21Q6ZMI0 780 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 CENPUQ71F23 418 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 TADA2BQ86TJ2 420 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 EXOC3L1Q86VI1 746 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 SESTD1Q86VW0 696 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 PPIL6Q8IXY8 311 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 CACNA2D3Q8IZS8 1091 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 NME8Q8N427 588 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 C2orf69Q8N8R5 385 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 JOSD2Q8TAC2 188 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 EPS8L3Q8TE67 593 aaKnown RBP10.18□□□□□ -0.78
RTF1-206ENST00000560447 ARHGEF2Q92974 986 aaKnown RBP10.18□□□□□ -0.78
RTF1-206ENST00000560447 ZNF560Q96MR9 790 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 ZNF317Q96PQ6 595 aaPredicted RBP10.18□□□□□ -0.78
RTF1-206ENST00000560447 RBM15Q96T37 977 aaKnown RBP eCLIP10.18□□□□□ -0.78
RTF1-206ENST00000560447 KATNAL1Q9BW62 490 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 GBA2Q9HCG7 927 aaPredicted RBP10.18□□□□□ -0.78
RTF1-206ENST00000560447 PPANQ9NQ55 473 aaKnown RBP10.18□□□□□ -0.78
RTF1-206ENST00000560447 METTL5Q9NRN9 209 aaKnown RBP10.18□□□□□ -0.78
RTF1-206ENST00000560447 EURLQ9NYK6 297 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 CNTN3Q9P232 1028 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 CYTH4Q9UIA0 394 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 TRPM7Q96QT4 1865 aa10.18□□□□□ -0.78
RTF1-206ENST00000560447 FAM170AA1A519 330 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 C2CD4BA6NLJ0 364 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 DCDC2CA8MYV0 355 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 E7ESA3 106 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 PI4K2BG5E9Z4 385 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 GOLGA8SH3BPF8 625 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 HAS3O00219 553 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 MCF2LO15068 1137 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 MAP3K7O43318 606 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 SPAG6O75602 509 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 FSBPO95073 299 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 GJB6O95452 261 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 ACSL3O95573 720 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 TRUB2O95900 331 aaKnown RBP10.17□□□□□ -0.78
RTF1-206ENST00000560447 RPLP2P05387 115 aaKnown RBP10.17□□□□□ -0.78
RTF1-206ENST00000560447 ZNF286BP0CG31 522 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 GHRP10912 638 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 KRT10P13645 584 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 DARSP14868 501 aaKnown RBP10.17□□□□□ -0.78
RTF1-206ENST00000560447 KCNE1P15382 129 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 DRD4P21917 467 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 PHBP35232 272 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 ACADSBP45954 432 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 RAP1GAPP47736 663 aa10.17□□□□□ -0.78
RTF1-206ENST00000560447 RPL34P49207 117 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms