RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 F8VZ95 297 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 O00370 1275 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 FOXN3O00409 490 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 XPO1O14980 1071 aaKnown RBP12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 RHOP08100 348 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 ATF6P18850 670 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 WEE1P30291 646 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 KRT9P35527 623 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 POLR2FP61218 127 aaKnown RBP12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 DPY19L2P1Q6NXN4 242 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 PAQR9Q6ZVX9 377 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 GRASPQ7Z6J2 395 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 ADHFE1Q8IWW8 467 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 ARHGAP18Q8N392 663 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 ZNF606Q8WXB4 792 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 ELMO3Q96BJ8 720 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 HSFY1Q96LI6 401 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 CORO1BQ9BR76 489 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 TRIM62Q9BVG3 475 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 TTLL2Q9BWV7 592 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 ZNF518BQ9C0D4 1074 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 GANQ9H2C0 597 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 CRISPLD1Q9H336 500 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 FAM49BQ9NUQ9 324 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 DNMT3BQ9UBC3 853 aaKnown RBP12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 TSPAN16Q9UKR8 245 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 PCDHGC3Q9UN70 934 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 MRPS23Q9Y3D9 190 aaKnown RBP12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 MYO16Q9Y6X6 1858 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 SLC38A8A6NNN8 435 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 SART1O43290 800 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 HCRTO43612 131 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 BMP1P13497 986 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 CCDC130P13994 396 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 FERP16591 822 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 YWHAQP27348 245 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 ADORA2BP29275 332 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 SOX5P35711 763 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 ACADSBP45954 432 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 JAM2P57087 298 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 CLUL1Q15846 466 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 DDR2Q16832 855 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 CLEC20AQ6ZU45 233 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 TADA2BQ86TJ2 420 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 ZDHHC14Q8IZN3 488 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 SCML4Q8N228 414 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 TDRD5Q8NAT2 981 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 MSANTD4Q8NCY6 345 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 RNF214Q8ND24 703 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 STKLD1Q8NE28 680 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 KCTD13Q8WZ19 329 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 MRPS31Q92665 395 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 SYN2Q92777 582 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 KAT5Q92993 513 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 NAP1L5Q96NT1 182 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 CDK5RAP1Q96SZ6 601 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 LHX5Q9H2C1 402 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 TMEM51Q9NW97 253 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 IL37Q9NZH6 218 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 TRPM5Q9NZQ8 1165 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 IFNKQ9P0W0 207 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 CDH7Q9ULB5 785 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 FHOD1Q9Y613 1164 aa12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 BZW2Q9Y6E2 419 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-215ENST00000560207 TCF20Q9UGU0 1960 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 FAM92AA1XBS5 289 aa12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 TEX33O43247 280 aa12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 THAP12O43422 761 aa12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 FBXO21O94952 628 aa12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 LSM8O95777 96 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 HMGA1P17096 107 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 PLA2G4AP47712 749 aa12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 MAP3K7CLP57077 242 aa12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 TFF2Q03403 129 aa12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 SPECC1LQ69YQ0 1117 aa12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 TRIM72Q6ZMU5 477 aa12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 MTSS1LQ765P7 747 aa12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 ZNF276Q8N554 614 aa12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 TTC9BQ8N6N2 239 aa12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 KIAA1958Q8N8K9 716 aa12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 SMOQ99835 787 aa12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 LRRC3Q9BY71 257 aa12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 PDCL3Q9H2J4 239 aa12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 POMKQ9H5K3 350 aa12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 LRRC4Q9HBW1 653 aa12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 IGSF9Q9P2J2 1179 aa12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 EPS15L1Q9UBC2 864 aa12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 REV3LO60673 3130 aa12.73□□□□□ -0.37
RABGGTA-215ENST00000560207 HELZP42694 1942 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 RNF225M0QZC1 329 aaPredicted RBP12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 CLDN5O00501 218 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 TNFRSF10BO14763 440 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 CYP26A1O43174 497 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 MYL4P12829 197 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 CYP11B1P15538 503 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 GABRR2P28476 465 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 GBP2P32456 591 aaPredicted RBP12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 CLCN1P35523 988 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 PBX1P40424 430 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms