RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 COMMD8Q9NX08 183 aa14.05□□□□□ -0.16
SMAD3-213ENST00000560175 EHD2Q9NZN4 543 aa14.05□□□□□ -0.16
SMAD3-213ENST00000560175 HMGXB4Q9UGU5 601 aa14.05□□□□□ -0.16
SMAD3-213ENST00000560175 MAGED2Q9UNF1 606 aaPredicted RBP14.05□□□□□ -0.16
SMAD3-213ENST00000560175 SIT1Q9Y3P8 196 aa14.05□□□□□ -0.16
SMAD3-213ENST00000560175 PATJQ8NI35 1801 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 HELZP42694 1942 aaKnown RBP14.04□□□□□ -0.16
SMAD3-213ENST00000560175 MYO15AQ9UKN7 3530 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 BICDL2A1A5D9 508 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 ZNF263O14978 683 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 GDI1P31150 447 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 ARHGAP29Q52LW3 1261 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 SNX30Q5VWJ9 437 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 SCARA5Q6ZMJ2 495 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 FAM35AQ86V20 835 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 CCDC105Q8IYK2 499 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 NUP93Q8N1F7 819 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 TTC39CQ8N584 583 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 MAB21L3Q8N8X9 362 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 ZMIZ2Q8NF64 920 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 PJA1Q8NG27 643 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 BPIFB1Q8TDL5 484 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 USP13Q92995 863 aaPredicted RBP14.04□□□□□ -0.16
SMAD3-213ENST00000560175 TATDN2Q93075 761 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 CLDN23Q96B33 292 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 TWNKQ96RR1 684 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 KCNK16Q96T55 309 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 HNRNPABQ99729 332 aaKnown RBP14.04□□□□□ -0.16
SMAD3-213ENST00000560175 FAM83CQ9BQN1 747 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 KIF9Q9HAQ2 790 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 HEBP1Q9NRV9 189 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 LMBRD1Q9NUN5 540 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 TDP1Q9NUW8 608 aa14.04□□□□□ -0.16
SMAD3-213ENST00000560175 ZNF840PA6NDX5 716 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 BIN1O00499 593 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 P4HA2O15460 535 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 OLFM2O95897 454 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 ANXA13P27216 316 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 PTPN5P54829 565 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 PLCB2Q00722 1185 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 NHLH1Q02575 133 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 PAK1Q13153 545 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 CAMK4Q16566 473 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 TRIM59Q8IWR1 403 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 KIAA1958Q8N8K9 716 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 C12orf29Q8N999 325 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 DTWD2Q8NBA8 298 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 CCDC150Q8NCX0 1101 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 LMO3Q8TAP4 145 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 OVCA2Q8WZ82 227 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 SMARCD1Q96GM5 515 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 SLC22A12Q96S37 553 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 SMOQ99835 787 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 NT5C1AQ9BXI3 368 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 IRF2BPLQ9H1B7 796 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 CLSTN2Q9H4D0 955 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 MMRN2Q9H8L6 949 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 LTB4R2Q9NPC1 389 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 CCL26Q9Y258 94 aa14.03□□□□□ -0.16
SMAD3-213ENST00000560175 PIEZO1Q92508 2521 aa14.02□□□□□ -0.16
SMAD3-213ENST00000560175 ATP8B3O60423 1300 aa14.02□□□□□ -0.17
SMAD3-213ENST00000560175 MAN2B1O00754 1011 aa14.02□□□□□ -0.17
SMAD3-213ENST00000560175 BEST1O76090 585 aa14.02□□□□□ -0.17
SMAD3-213ENST00000560175 RTN3O95197 1032 aaPredicted RBP14.02□□□□□ -0.17
SMAD3-213ENST00000560175 GNA14O95837 355 aa14.02□□□□□ -0.17
SMAD3-213ENST00000560175 ZDHHC11BP0C7U3 371 aa14.02□□□□□ -0.17
SMAD3-213ENST00000560175 AVPR1AP37288 418 aa14.02□□□□□ -0.17
SMAD3-213ENST00000560175 FMO5P49326 533 aa14.02□□□□□ -0.17
SMAD3-213ENST00000560175 KLHL10Q6JEL2 608 aa14.02□□□□□ -0.17
SMAD3-213ENST00000560175 MAMSTRQ6ZN01 415 aa14.02□□□□□ -0.17
SMAD3-213ENST00000560175 GPIHBP1Q8IV16 184 aa14.02□□□□□ -0.17
SMAD3-213ENST00000560175 UBR7Q8N806 425 aa14.02□□□□□ -0.17
SMAD3-213ENST00000560175 MLKLQ8NB16 471 aa14.02□□□□□ -0.17
SMAD3-213ENST00000560175 RIN3Q8TB24 985 aa14.02□□□□□ -0.17
SMAD3-213ENST00000560175 SLC2A14Q8TDB8 520 aa14.02□□□□□ -0.17
SMAD3-213ENST00000560175 CYFIP2Q96F07 1278 aa14.02□□□□□ -0.17
SMAD3-213ENST00000560175 MSANTD3Q96H12 275 aa14.02□□□□□ -0.17
SMAD3-213ENST00000560175 CYP2S1Q96SQ9 504 aa14.02□□□□□ -0.17
SMAD3-213ENST00000560175 FOXQ1Q9C009 403 aa14.02□□□□□ -0.17
SMAD3-213ENST00000560175 PNPLA8Q9NP80 782 aa14.02□□□□□ -0.17
SMAD3-213ENST00000560175 DMAP1Q9NPF5 467 aaPredicted RBP14.02□□□□□ -0.17
SMAD3-213ENST00000560175 RWDD2AQ9UIY3 292 aa14.02□□□□□ -0.17
SMAD3-213ENST00000560175 MTF2Q9Y483 593 aaPredicted RBP14.02□□□□□ -0.17
SMAD3-213ENST00000560175 C2orf78A6NCI8 922 aa14.01□□□□□ -0.17
SMAD3-213ENST00000560175 HHLA1C9JL84 531 aa14.01□□□□□ -0.17
SMAD3-213ENST00000560175 DPYSL4O14531 572 aa14.01□□□□□ -0.17
SMAD3-213ENST00000560175 OAS1P00973 400 aaKnown RBP14.01□□□□□ -0.17
SMAD3-213ENST00000560175 USP17L7P0C7H9 530 aa14.01□□□□□ -0.17
SMAD3-213ENST00000560175 CCDC130P13994 396 aa14.01□□□□□ -0.17
SMAD3-213ENST00000560175 YWHAQP27348 245 aa14.01□□□□□ -0.17
SMAD3-213ENST00000560175 MAGEA9P43362 315 aa14.01□□□□□ -0.17
SMAD3-213ENST00000560175 RPS9P46781 194 aaKnown RBP14.01□□□□□ -0.17
SMAD3-213ENST00000560175 RAD23BP54727 409 aa14.01□□□□□ -0.17
SMAD3-213ENST00000560175 SLC7A9P82251 487 aa14.01□□□□□ -0.17
SMAD3-213ENST00000560175 ZXDBP98169 803 aa14.01□□□□□ -0.17
SMAD3-213ENST00000560175 TAF10Q12962 218 aa14.01□□□□□ -0.17
SMAD3-213ENST00000560175 DCAF17Q5H9S7 520 aaPredicted RBP14.01□□□□□ -0.17
SMAD3-213ENST00000560175 WDR44Q5JSH3 913 aa14.01□□□□□ -0.17
SMAD3-213ENST00000560175 TCERG1LQ5VWI1 586 aa14.01□□□□□ -0.17
SMAD3-213ENST00000560175 C1orf228Q6PIY5 440 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms