RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 POLMQ9NP87 494 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-213ENST00000560127 ZDHHC4Q9NPG8 344 aa13.78□□□□□ -0.2
RABGGTA-213ENST00000560127 NPHP3-ACAD11A0A0J9YXS1 232 aa13.77□□□□□ -0.21
RABGGTA-213ENST00000560127 ARHGAP33O14559 1287 aa13.77□□□□□ -0.21
RABGGTA-213ENST00000560127 AP5Z1O43299 807 aa13.77□□□□□ -0.21
RABGGTA-213ENST00000560127 GJB3O75712 270 aa13.77□□□□□ -0.21
RABGGTA-213ENST00000560127 SPTA1P02549 2419 aa13.77□□□□□ -0.21
RABGGTA-213ENST00000560127 CYP17A1P05093 508 aa13.77□□□□□ -0.21
RABGGTA-213ENST00000560127 HDCP19113 662 aa13.77□□□□□ -0.21
RABGGTA-213ENST00000560127 KIR2DL1P43626 348 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-213ENST00000560127 RPL10AP62906 217 aaKnown RBP13.77□□□□□ -0.21
RABGGTA-213ENST00000560127 TSPY1Q01534 308 aa13.77□□□□□ -0.21
RABGGTA-213ENST00000560127 BYSLQ13895 437 aaKnown RBP13.77□□□□□ -0.21
RABGGTA-213ENST00000560127 HSF5Q4G112 596 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-213ENST00000560127 EOGTQ5NDL2 527 aa13.77□□□□□ -0.21
RABGGTA-213ENST00000560127 SLC39A4Q6P5W5 647 aa13.77□□□□□ -0.21
RABGGTA-213ENST00000560127 MSTO1Q9BUK6 570 aa13.77□□□□□ -0.21
RABGGTA-213ENST00000560127 RAB34Q9BZG1 259 aa13.77□□□□□ -0.21
RABGGTA-213ENST00000560127 ABCB6Q9NP58 842 aa13.77□□□□□ -0.21
RABGGTA-213ENST00000560127 SCUBE2Q9NQ36 999 aa13.77□□□□□ -0.21
RABGGTA-213ENST00000560127 DPP3Q9NY33 737 aa13.77□□□□□ -0.21
RABGGTA-213ENST00000560127 CACNA2D2Q9NY47 1150 aa13.77□□□□□ -0.21
RABGGTA-213ENST00000560127 C2CD2Q9Y426 696 aa13.77□□□□□ -0.21
RABGGTA-213ENST00000560127 ATMQ13315 3056 aa13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 A0A0A0MRY4 1105 aa13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 TCRBV21S2A2A0A5A6 115 aa13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 EIF4E1BA6NMX2 242 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 KPNA7A9QM74 516 aa13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 H0YCG3 227 aa13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 LEFTY2O00292 366 aa13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 KAT7O95251 611 aa13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 TRAPPC10P48553 1259 aa13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 ACOT2P49753 483 aa13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 SLC12A3P55017 1021 aa13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 RPL6Q02878 288 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 ZNF33AQ06730 810 aa13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 KCNB1Q14721 858 aa13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 CCDC142Q17RM4 750 aa13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 FILIP1Q7Z7B0 1213 aa13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 C12orf40Q86WS4 652 aa13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 PGBD3Q8N328 593 aa13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 SYT2Q8N9I0 419 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 GLIS3Q8NEA6 775 aa13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 SPATA18Q8TC71 538 aa13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 PNMA5Q96PV4 448 aa13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 PNKPQ96T60 521 aa13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 PKMYT1Q99640 499 aa13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 ASB7Q9H672 318 aa13.76□□□□□ -0.21
RABGGTA-213ENST00000560127 COL6A6A6NMZ7 2263 aa13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 HECTD1Q9ULT8 2610 aa13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 MYMKA6NI61 221 aa13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 APODP05090 189 aa13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 SYPP08247 313 aa13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 ACAT1P24752 427 aaKnown RBP13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 TOB1P50616 345 aaPredicted RBP13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 SLC14A1Q13336 389 aa13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 DHCR24Q15392 516 aa13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 ZRSR1Q15695 479 aaKnown RBP13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 ARSHQ5FYA8 562 aa13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 INTS6LQ5JSJ4 861 aaKnown RBP13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 RABEPKQ7Z6M1 372 aa13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 SLCO6A1Q86UG4 719 aa13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 SLC41A1Q8IVJ1 513 aa13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 ADGRG2Q8IZP9 1017 aa13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 PDCL2Q8N4E4 241 aa13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 C8orf76Q96K31 380 aa13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 ACBD6Q9BR61 282 aa13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 LARSQ9P2J5 1176 aaKnown RBP13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 GTF3C4Q9UKN8 822 aa13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 PCDHB9Q9Y5E1 797 aa13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 PCDHB6Q9Y5E3 794 aa13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 TMEM131Q92545 1883 aa13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 NUMA1Q14980 2115 aa13.75□□□□□ -0.21
RABGGTA-213ENST00000560127 GABRG2P18507 467 aa13.74□□□□□ -0.21
RABGGTA-213ENST00000560127 EIF2DP41214 584 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-213ENST00000560127 TNFRSF4P43489 277 aa13.74□□□□□ -0.21
RABGGTA-213ENST00000560127 ATP2C1P98194 919 aaPredicted RBP13.74□□□□□ -0.21
RABGGTA-213ENST00000560127 SV2CQ496J9 727 aa13.74□□□□□ -0.21
RABGGTA-213ENST00000560127 HYIQ5T013 277 aa13.74□□□□□ -0.21
RABGGTA-213ENST00000560127 SLC36A4Q6YBV0 504 aa13.74□□□□□ -0.21
RABGGTA-213ENST00000560127 NAXDQ8IW45 347 aa13.74□□□□□ -0.21
RABGGTA-213ENST00000560127 PHTF2Q8N3S3 785 aa13.74□□□□□ -0.21
RABGGTA-213ENST00000560127 FSIP1Q8NA03 581 aa13.74□□□□□ -0.21
RABGGTA-213ENST00000560127 CRELD1Q96HD1 420 aa13.74□□□□□ -0.21
RABGGTA-213ENST00000560127 PLIN2Q99541 437 aa13.74□□□□□ -0.21
RABGGTA-213ENST00000560127 ARHGEF4Q9NR80 690 aa13.74□□□□□ -0.21
RABGGTA-213ENST00000560127 DDX43Q9NXZ2 648 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-213ENST00000560127 KCND2Q9NZV8 630 aa13.74□□□□□ -0.21
RABGGTA-213ENST00000560127 L1RE1Q9UN81 338 aa13.74□□□□□ -0.21
RABGGTA-213ENST00000560127 IGHV1OR15-9A0A0B4J2B8 117 aa13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 A0A1W2PQD8 194 aa13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 ANKRD63C9JTQ0 380 aa13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 K7ENM7 598 aa13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 SCAMP3O14828 347 aaKnown RBP13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 HCRTO43612 131 aa13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 CBFA2T3O75081 653 aa13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 PLA2G4BP0C869 781 aa13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 GRIA2P42262 883 aa13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 PDE6CP51160 858 aa13.73□□□□□ -0.21
RABGGTA-213ENST00000560127 KDSRQ06136 332 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms