RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 ARL14EPQ8N8R7 260 aaPredicted RBP14.01□□□□□ -0.17
TPM1-220ENST00000559556 SH3RF2Q8TEC5 729 aa14.01□□□□□ -0.17
TPM1-220ENST00000559556 NOC3LQ8WTT2 800 aaKnown RBP14.01□□□□□ -0.17
TPM1-220ENST00000559556 MYLPFQ96A32 169 aa14.01□□□□□ -0.17
TPM1-220ENST00000559556 HPDLQ96IR7 371 aa14.01□□□□□ -0.17
TPM1-220ENST00000559556 USP28Q96RU2 1077 aa14.01□□□□□ -0.17
TPM1-220ENST00000559556 TTLL2Q9BWV7 592 aa14.01□□□□□ -0.17
TPM1-220ENST00000559556 DUSP15Q9H1R2 295 aaPredicted RBP14.01□□□□□ -0.17
TPM1-220ENST00000559556 CRTAC1Q9NQ79 661 aa14.01□□□□□ -0.17
TPM1-220ENST00000559556 CDH9Q9ULB4 789 aa14.01□□□□□ -0.17
TPM1-220ENST00000559556 PTPRBP23467 1997 aa14.01□□□□□ -0.17
TPM1-220ENST00000559556 NYNRINQ9P2P1 1898 aaKnown RBP14.01□□□□□ -0.17
TPM1-220ENST00000559556 ATRXP46100 2492 aa14□□□□□ -0.17
TPM1-220ENST00000559556 TMEM131Q92545 1883 aa14□□□□□ -0.17
TPM1-220ENST00000559556 ZNF233A6NK53 670 aa14□□□□□ -0.17
TPM1-220ENST00000559556 KRT37O76014 449 aa14□□□□□ -0.17
TPM1-220ENST00000559556 NFATC1O95644 943 aa14□□□□□ -0.17
TPM1-220ENST00000559556 WARSP23381 471 aaKnown RBP14□□□□□ -0.17
TPM1-220ENST00000559556 LMO2P25791 158 aa14□□□□□ -0.17
TPM1-220ENST00000559556 HOXD13P35453 343 aa14□□□□□ -0.17
TPM1-220ENST00000559556 PSMC1P62191 440 aaKnown RBP14□□□□□ -0.17
TPM1-220ENST00000559556 NR1H3Q13133 447 aa14□□□□□ -0.17
TPM1-220ENST00000559556 DUOXA2Q1HG44 320 aa14□□□□□ -0.17
TPM1-220ENST00000559556 STPG1Q5TH74 334 aa14□□□□□ -0.17
TPM1-220ENST00000559556 STXBP4Q6ZWJ1 553 aa14□□□□□ -0.17
TPM1-220ENST00000559556 CBWD2Q8IUF1 395 aa14□□□□□ -0.17
TPM1-220ENST00000559556 WDR49Q8IV35 697 aa14□□□□□ -0.17
TPM1-220ENST00000559556 KIAA1958Q8N8K9 716 aa14□□□□□ -0.17
TPM1-220ENST00000559556 GLIS3Q8NEA6 775 aa14□□□□□ -0.17
TPM1-220ENST00000559556 TNMDQ9H2S6 317 aa14□□□□□ -0.17
TPM1-220ENST00000559556 VPS45Q9NRW7 570 aa14□□□□□ -0.17
TPM1-220ENST00000559556 HSPBP1Q9NZL4 362 aa14□□□□□ -0.17
TPM1-220ENST00000559556 MAGEC2Q9UBF1 373 aaPredicted RBP14□□□□□ -0.17
TPM1-220ENST00000559556 R3HCC1Q9Y3T6 440 aaKnown RBP14□□□□□ -0.17
TPM1-220ENST00000559556 BAHCC1Q9P281 2608 aa14□□□□□ -0.17
TPM1-220ENST00000559556 ACACAQ13085 2346 aa13.99□□□□□ -0.17
TPM1-220ENST00000559556 TULP1O00294 542 aaPredicted RBP13.99□□□□□ -0.17
TPM1-220ENST00000559556 EIF3DO15371 548 aaKnown RBP eCLIP13.99□□□□□ -0.17
TPM1-220ENST00000559556 HDCP19113 662 aa13.99□□□□□ -0.17
TPM1-220ENST00000559556 BDNFP23560 247 aa13.99□□□□□ -0.17
TPM1-220ENST00000559556 OPRD1P41143 372 aa13.99□□□□□ -0.17
TPM1-220ENST00000559556 NASPP49321 788 aaPredicted RBP13.99□□□□□ -0.17
TPM1-220ENST00000559556 USP46P62068 366 aa13.99□□□□□ -0.17
TPM1-220ENST00000559556 NOP14P78316 857 aaKnown RBP13.99□□□□□ -0.17
TPM1-220ENST00000559556 ZXDBP98169 803 aa13.99□□□□□ -0.17
TPM1-220ENST00000559556 ELF2Q15723 593 aa13.99□□□□□ -0.17
TPM1-220ENST00000559556 E2F4Q16254 413 aa13.99□□□□□ -0.17
TPM1-220ENST00000559556 GAB4Q2WGN9 574 aa13.99□□□□□ -0.17
TPM1-220ENST00000559556 DENND5BQ6ZUT9 1274 aa13.99□□□□□ -0.17
TPM1-220ENST00000559556 PDILTQ8N807 584 aa13.99□□□□□ -0.17
TPM1-220ENST00000559556 TTC16Q8NEE8 873 aa13.99□□□□□ -0.17
TPM1-220ENST00000559556 CCDC26Q8TAB7 109 aa13.99□□□□□ -0.17
TPM1-220ENST00000559556 PANK2Q9BZ23 570 aa13.99□□□□□ -0.17
TPM1-220ENST00000559556 SMOC1Q9H4F8 434 aa13.99□□□□□ -0.17
TPM1-220ENST00000559556 KIAA1586Q9HCI6 787 aa13.99□□□□□ -0.17
TPM1-220ENST00000559556 KBTBD4Q9NVX7 518 aa13.99□□□□□ -0.17
TPM1-220ENST00000559556 EHD2Q9NZN4 543 aa13.99□□□□□ -0.17
TPM1-220ENST00000559556 MTMR6Q9Y217 621 aa13.99□□□□□ -0.17
TPM1-220ENST00000559556 NUMA1Q14980 2115 aa13.99□□□□□ -0.17
TPM1-220ENST00000559556 TRIM66O15016 1216 aa13.98□□□□□ -0.17
TPM1-220ENST00000559556 OLFM2O95897 454 aa13.98□□□□□ -0.17
TPM1-220ENST00000559556 ANXA13P27216 316 aa13.98□□□□□ -0.17
TPM1-220ENST00000559556 PMLP29590 882 aa13.98□□□□□ -0.17
TPM1-220ENST00000559556 ST3GAL2Q16842 350 aa13.98□□□□□ -0.17
TPM1-220ENST00000559556 CNNM4Q6P4Q7 775 aa13.98□□□□□ -0.17
TPM1-220ENST00000559556 EPM2AIP1Q7L775 607 aaPredicted RBP13.98□□□□□ -0.17
TPM1-220ENST00000559556 MYCBPAPQ8TBZ2 947 aa13.98□□□□□ -0.17
TPM1-220ENST00000559556 USP33Q8TEY7 942 aa13.98□□□□□ -0.17
TPM1-220ENST00000559556 HPS3Q969F9 1004 aa13.98□□□□□ -0.17
TPM1-220ENST00000559556 PCED1BQ96HM7 432 aa13.98□□□□□ -0.17
TPM1-220ENST00000559556 INTS4Q96HW7 963 aaKnown RBP13.98□□□□□ -0.17
TPM1-220ENST00000559556 TRIM9Q9C026 710 aa13.98□□□□□ -0.17
TPM1-220ENST00000559556 LINC00597Q9H2U6 94 aa13.98□□□□□ -0.17
TPM1-220ENST00000559556 CUEDC2Q9H467 287 aa13.98□□□□□ -0.17
TPM1-220ENST00000559556 ZSCAN16Q9H4T2 348 aaPredicted RBP13.98□□□□□ -0.17
TPM1-220ENST00000559556 TRPM5Q9NZQ8 1165 aa13.98□□□□□ -0.17
TPM1-220ENST00000559556 NME7Q9Y5B8 376 aa13.98□□□□□ -0.17
TPM1-220ENST00000559556 LAMA5O15230 3695 aa13.98□□□□□ -0.17
TPM1-220ENST00000559556 UBE4BO95155 1302 aa13.97□□□□□ -0.17
TPM1-220ENST00000559556 BCLAF3A2AJT9 711 aaKnown RBP13.97□□□□□ -0.17
TPM1-220ENST00000559556 K7EQS6 105 aa13.97□□□□□ -0.17
TPM1-220ENST00000559556 LEFTY2O00292 366 aa13.97□□□□□ -0.17
TPM1-220ENST00000559556 DCLK1O15075 740 aa13.97□□□□□ -0.17
TPM1-220ENST00000559556 TACC1O75410 805 aa13.97□□□□□ -0.17
TPM1-220ENST00000559556 RHOBTB1O94844 696 aa13.97□□□□□ -0.17
TPM1-220ENST00000559556 OAS1P00973 400 aaKnown RBP13.97□□□□□ -0.17
TPM1-220ENST00000559556 CYP17A1P05093 508 aa13.97□□□□□ -0.17
TPM1-220ENST00000559556 PDGFRBP09619 1106 aa13.97□□□□□ -0.17
TPM1-220ENST00000559556 KCNA4P22459 653 aa13.97□□□□□ -0.17
TPM1-220ENST00000559556 GRIK1P39086 918 aa13.97□□□□□ -0.17
TPM1-220ENST00000559556 PPP3CCP48454 512 aa13.97□□□□□ -0.17
TPM1-220ENST00000559556 SLC7A9P82251 487 aa13.97□□□□□ -0.17
TPM1-220ENST00000559556 SHC2P98077 582 aa13.97□□□□□ -0.17
TPM1-220ENST00000559556 CYP27A1Q02318 531 aa13.97□□□□□ -0.17
TPM1-220ENST00000559556 PSMD2Q13200 908 aa13.97□□□□□ -0.17
TPM1-220ENST00000559556 SNRNP35Q16560 246 aaKnown RBP13.97□□□□□ -0.17
TPM1-220ENST00000559556 MDH1BQ5I0G3 518 aa13.97□□□□□ -0.17
TPM1-220ENST00000559556 N4BP2L1Q5TBK1 243 aaPredicted RBP13.97□□□□□ -0.17
TPM1-220ENST00000559556 TCEAL6Q6IPX3 200 aa13.97□□□□□ -0.17
TPM1-220ENST00000559556 TRAPPC11Q7Z392 1133 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms