RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 CHN1P15882 459 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 CYP3A5P20815 502 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 STIP1P31948 543 aaKnown RBP11.83□□□□□ -0.52
CLPX-204ENST00000559152 CRYBB1P53674 252 aaPredicted RBP11.83□□□□□ -0.52
CLPX-204ENST00000559152 SEC24CP53992 1094 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 IFI35P80217 286 aaPredicted RBP11.83□□□□□ -0.52
CLPX-204ENST00000559152 OTUD4Q01804 1114 aaKnown RBP11.83□□□□□ -0.52
CLPX-204ENST00000559152 NR1H3Q13133 447 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 LONRF1Q17RB8 773 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 PKDCCQ504Y2 493 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 KCNT1Q5JUK3 1230 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 FBXO47Q5MNV8 452 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 PRAMEF19Q5SWL8 479 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 C9orf57Q5W0N0 161 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 FAM183BPQ6ZVS7 135 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 YTHDF3Q7Z739 585 aaKnown RBP11.83□□□□□ -0.52
CLPX-204ENST00000559152 OR6B3Q8NGW1 331 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 DNAJB3Q8WWF6 145 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 RXFP2Q8WXD0 754 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 USP6NLQ92738 828 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 ZMAT2Q96NC0 199 aaKnown RBP11.83□□□□□ -0.52
CLPX-204ENST00000559152 TBCBQ99426 244 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 MRPL45Q9BRJ2 306 aaKnown RBP11.83□□□□□ -0.52
CLPX-204ENST00000559152 SLC4A5Q9BY07 1137 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 EIF2AQ9BY44 585 aaKnown RBP11.83□□□□□ -0.52
CLPX-204ENST00000559152 RABEP2Q9H5N1 569 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 LRRC4CQ9HCJ2 640 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 INTS9Q9NV88 658 aaKnown RBP11.83□□□□□ -0.52
CLPX-204ENST00000559152 PCSK1NQ9UHG2 260 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 PIN4Q9Y237 131 aaKnown RBP11.83□□□□□ -0.52
CLPX-204ENST00000559152 C17orf102A2RUQ5 167 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 MYO1CO00159 1063 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 TULP2O00295 520 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 PIRO00625 290 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 MCF2LO15068 1137 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 RECQL4O94761 1208 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 SCNN1AP37088 669 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 HUNKP57058 714 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 CORO7P57737 925 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 SLC6A3Q01959 620 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 SNX17Q15036 470 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 TAF1CQ15572 869 aaPredicted RBP11.82□□□□□ -0.52
CLPX-204ENST00000559152 XKR4Q5GH76 650 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 PPP1R26Q5T8A7 1209 aaPredicted RBP11.82□□□□□ -0.52
CLPX-204ENST00000559152 ACOT1Q86TX2 421 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 PPIL6Q8IXY8 311 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 SLC35F5Q8WV83 523 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 TEKT4Q8WW24 435 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 HSPH1Q92598 858 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 ARHGEF2Q92974 986 aaKnown RBP11.82□□□□□ -0.52
CLPX-204ENST00000559152 CHMP6Q96FZ7 201 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 TMEM121Q9BTD3 319 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 CALN1Q9BXU9 219 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 CCDC134Q9H6E4 229 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 GDAP2Q9NXN4 497 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 LGALS13Q9UHV8 139 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 ACTL7BQ9Y614 415 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 FAM169AQ9Y6X4 670 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 A8MXQ7 604 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 ENDOD1O94919 500 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 IFNB1P01574 187 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 PFKMP08237 780 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 MYL3P08590 195 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 FAM163BP0C2L3 166 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 SDC4P31431 198 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 INHBEP58166 350 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 DYNLT1P63172 113 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 SV2CQ496J9 727 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 RNASEH2BQ5TBB1 312 aaKnown RBP11.82□□□□□ -0.52
CLPX-204ENST00000559152 ARCQ7LC44 396 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 CPLX4Q7Z7G2 160 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 EXOC3L1Q86VI1 746 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 CRYBG2Q8N1P7 616 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 C12orf29Q8N999 325 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 HAUS1Q96CS2 278 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 CDHR5Q9HBB8 845 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 SAYSD1Q9NPB0 183 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 TUBGCP4Q9UGJ1 667 aa11.82□□□□□ -0.52
CLPX-204ENST00000559152 SMIM28A0A1B0GU29 152 aa11.81□□□□□ -0.52
CLPX-204ENST00000559152 C5orf60A6NFR6 353 aa11.81□□□□□ -0.52
CLPX-204ENST00000559152 KPNA7A9QM74 516 aa11.81□□□□□ -0.52
CLPX-204ENST00000559152 ALOX15BO15296 676 aa11.81□□□□□ -0.52
CLPX-204ENST00000559152 ACADSBP45954 432 aa11.81□□□□□ -0.52
CLPX-204ENST00000559152 GKAP1Q5VSY0 366 aaPredicted RBP11.81□□□□□ -0.52
CLPX-204ENST00000559152 TAF2Q6P1X5 1199 aa11.81□□□□□ -0.52
CLPX-204ENST00000559152 OLFML1Q6UWY5 402 aa11.81□□□□□ -0.52
CLPX-204ENST00000559152 TMEM130Q8N3G9 435 aa11.81□□□□□ -0.52
CLPX-204ENST00000559152 C7orf31Q8N865 590 aa11.81□□□□□ -0.52
CLPX-204ENST00000559152 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.81□□□□□ -0.52
CLPX-204ENST00000559152 P3H4Q92791 437 aa11.81□□□□□ -0.52
CLPX-204ENST00000559152 APBA2Q99767 749 aa11.81□□□□□ -0.52
CLPX-204ENST00000559152 SNX25Q9H3E2 840 aa11.81□□□□□ -0.52
CLPX-204ENST00000559152 NXF3Q9H4D5 531 aaKnown RBP11.81□□□□□ -0.52
CLPX-204ENST00000559152 DNAJC17Q9NVM6 304 aaKnown RBP11.81□□□□□ -0.52
CLPX-204ENST00000559152 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.81□□□□□ -0.52
CLPX-204ENST00000559152 ZNF487B1APH4 448 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 ZSCAN5DPP0CG00 497 aa11.8□□□□□ -0.52
CLPX-204ENST00000559152 PECAM1P16284 738 aaPredicted RBP11.8□□□□□ -0.52
CLPX-204ENST00000559152 GNL1P36915 607 aaPredicted RBP11.8□□□□□ -0.52
CLPX-204ENST00000559152 TAF6P49848 677 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms