RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 TSC2P49815 1807 aa16.76■□□□□ 0.27
CDC42BPB-204ENST00000559043 GOLGA6BA6NDN3 693 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 BHMG1C9JSJ3 638 aaPredicted RBP16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 CCDC188H7C350 402 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 CYP26A1O43174 497 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 RAD51CO43502 376 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 SOD2P04179 222 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 TYMPP19971 482 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 ABCB4P21439 1286 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 PPM1AP35813 382 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 CARSP49589 748 aaKnown RBP16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 RAD23BP54727 409 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 GUCY2DQ02846 1103 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 LRIT3Q3SXY7 679 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 PPP2R2DQ66LE6 453 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 TMEM270Q6UE05 265 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 ENOSF1Q7L5Y1 443 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 RHOT2Q8IXI1 618 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 OR10T2Q8NGX3 314 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 ZBTB9Q96C00 473 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 ZSWIM1Q9BR11 485 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 TTPALQ9BTX7 342 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 PLVAPQ9BX97 442 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 SLC28A3Q9HAS3 691 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 NOCTQ9UK39 431 aaKnown RBP16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 BARX2Q9UMQ3 279 aaPredicted RBP16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 PCDHB4Q9Y5E5 795 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 ZSCAN5CA6NGD5 496 aaPredicted RBP16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 RFXAPO00287 272 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 SYN3O14994 580 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 DDX3YO15523 660 aaKnown RBP16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 TBC1D4O60343 1298 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 USP8P40818 1118 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 ZNF132P52740 706 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 USP41Q3LFD5 358 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 OVOS1Q6IE37 1185 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 LRRTM3Q86VH5 581 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 TMEM86AQ8N2M4 240 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 SLC4A11Q8NBS3 891 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 EPS8L1Q8TE68 723 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 CASKIN2Q8WXE0 1202 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.75■□□□□ 0.271e-7■■■■■ 36.1
CDC42BPB-204ENST00000559043 TIFAQ96CG3 184 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 SEPT11Q9NVA2 429 aaKnown RBP16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 DDX43Q9NXZ2 648 aaKnown RBP16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 COG5Q9UP83 839 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 MYO9BQ13459 2157 aa16.75■□□□□ 0.27
CDC42BPB-204ENST00000559043 SZT2Q5T011 3432 aa16.74■□□□□ 0.27
CDC42BPB-204ENST00000559043 SOX1O00570 391 aaPredicted RBP16.74■□□□□ 0.27
CDC42BPB-204ENST00000559043 C2CD2LO14523 706 aa16.74■□□□□ 0.27
CDC42BPB-204ENST00000559043 ADAM12O43184 909 aa16.74■□□□□ 0.27
CDC42BPB-204ENST00000559043 LILRB3O75022 631 aa16.74■□□□□ 0.27
CDC42BPB-204ENST00000559043 RB1P06400 928 aa16.74■□□□□ 0.27
CDC42BPB-204ENST00000559043 FAM163BP0C2L3 166 aa16.74■□□□□ 0.27
CDC42BPB-204ENST00000559043 GZMAP12544 262 aa16.74■□□□□ 0.27
CDC42BPB-204ENST00000559043 KRT5P13647 590 aa16.74■□□□□ 0.27
CDC42BPB-204ENST00000559043 CHRNB2P17787 502 aa16.74■□□□□ 0.27
CDC42BPB-204ENST00000559043 KRT17Q04695 432 aa16.74■□□□□ 0.27
CDC42BPB-204ENST00000559043 YWHAHQ04917 246 aaPredicted RBP16.74■□□□□ 0.27
CDC42BPB-204ENST00000559043 ELAVL2Q12926 359 aaKnown RBP16.74■□□□□ 0.27
CDC42BPB-204ENST00000559043 PTPROQ16827 1216 aa16.74■□□□□ 0.27
CDC42BPB-204ENST00000559043 ALS2CLQ60I27 953 aa16.74■□□□□ 0.27
CDC42BPB-204ENST00000559043 ACOT1Q86TX2 421 aa16.74■□□□□ 0.27
CDC42BPB-204ENST00000559043 MREGQ8N565 214 aa16.74■□□□□ 0.27
CDC42BPB-204ENST00000559043 C12orf29Q8N999 325 aa16.74■□□□□ 0.27
CDC42BPB-204ENST00000559043 POF1BQ8WVV4 589 aa16.74■□□□□ 0.27
CDC42BPB-204ENST00000559043 ARNTL2Q8WYA1 636 aa16.74■□□□□ 0.27
CDC42BPB-204ENST00000559043 RIN2Q8WYP3 895 aaPredicted RBP16.74■□□□□ 0.27
CDC42BPB-204ENST00000559043 SH3GL2Q99962 352 aa16.74■□□□□ 0.27
CDC42BPB-204ENST00000559043 A0A1W2PPC1 479 aa16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 A8MXQ7 604 aa16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 RTN2O75298 545 aa16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 CSPG5O95196 566 aa16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 FTLP02792 175 aaPredicted RBP16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 OR4Q2P0C623 313 aa16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 RPL17P18621 184 aaKnown RBP16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 DSG1Q02413 1049 aa16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 PRPF38BQ5VTL8 546 aaKnown RBP16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 SLC47A2Q86VL8 602 aa16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 KLHL7Q8IXQ5 586 aa16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 RBBP8NLQ8NC74 664 aaPredicted RBP16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 TSEN2Q8NCE0 465 aaKnown RBP16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 TFAP2BQ92481 460 aa16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 HERC2P3Q9BVR0 1158 aa16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 ZBP1Q9H171 429 aa16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 SNX25Q9H3E2 840 aa16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 FAM204AQ9H8W3 233 aa16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 CRTAC1Q9NQ79 661 aa16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 DSEQ9UL01 958 aa16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 NFU1Q9UMS0 254 aa16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 RWDD3Q9Y3V2 267 aa16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 ESYT3A0FGR9 886 aa16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 H3BNC9 293 aa16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 MTA2O94776 668 aa16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 IRS1P35568 1242 aa16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 LHX1P48742 406 aa16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 PSMC1P62191 440 aaKnown RBP16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 C11orf63Q6NUN7 778 aa16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 NOP9Q86U38 636 aaKnown RBP16.73■□□□□ 0.27
CDC42BPB-204ENST00000559043 CRYBG2Q8N1P7 616 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms