RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 ZNF638Q14966 1978 aaKnown RBP16.32■□□□□ 0.2
RPL28-206ENST00000558752 GREB1Q4ZG55 1949 aa16.32■□□□□ 0.2
RPL28-206ENST00000558752 TXNDC8Q6A555 127 aa16.32■□□□□ 0.2
RPL28-206ENST00000558752 SPAG17Q6Q759 2223 aa16.32■□□□□ 0.2
RPL28-206ENST00000558752 KBTBD6Q86V97 674 aa16.32■□□□□ 0.2
RPL28-206ENST00000558752 ELOA2Q8IYF1 753 aaPredicted RBP16.32■□□□□ 0.2
RPL28-206ENST00000558752 TOP6BLQ8N6T0 577 aa16.32■□□□□ 0.2
RPL28-206ENST00000558752 KIAA0895Q8NCT3 520 aa16.32■□□□□ 0.2
RPL28-206ENST00000558752 TIGD1Q96MW7 591 aa16.32■□□□□ 0.2
RPL28-206ENST00000558752 PI4K2AQ9BTU6 479 aa16.32■□□□□ 0.2
RPL28-206ENST00000558752 HPS4Q9NQG7 708 aa16.32■□□□□ 0.2
RPL28-206ENST00000558752 C2orf42Q9NWW7 574 aa16.32■□□□□ 0.2
RPL28-206ENST00000558752 SCN1AP35498 2009 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 TSC2P49815 1807 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 TRAV19A0A0A6YYK7 116 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 KRT19P08727 400 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 HMGA1P17096 107 aaKnown RBP16.31■□□□□ 0.2
RPL28-206ENST00000558752 TNNI1P19237 187 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 HOXC13P31276 330 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 IFNAR2P48551 515 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 PXNP49023 591 aaPredicted RBP16.31■□□□□ 0.2
RPL28-206ENST00000558752 GALK1P51570 392 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 WNT7BP56706 349 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 MTF1Q14872 753 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 NFIL3Q16649 462 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 STPG1Q5TH74 334 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 TRIM68Q6AZZ1 485 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 SYT13Q7L8C5 426 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 TRAPPC11Q7Z392 1133 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 FMR1NBQ8N0W7 255 aaPredicted RBP16.31■□□□□ 0.2
RPL28-206ENST00000558752 CD101Q93033 1021 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 ATP2A3Q93084 1043 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 TRMT2BQ96GJ1 504 aaKnown RBP16.31■□□□□ 0.2
RPL28-206ENST00000558752 HPDLQ96IR7 371 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 CGRRF1Q99675 332 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 MTMR12Q9C0I1 747 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 KCTD10Q9H3F6 313 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 GOLPH3LQ9H4A5 285 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 RMND1Q9NWS8 449 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 DUS2Q9NX74 493 aaKnown RBP16.31■□□□□ 0.2
RPL28-206ENST00000558752 DDX43Q9NXZ2 648 aaKnown RBP16.31■□□□□ 0.2
RPL28-206ENST00000558752 EHD2Q9NZN4 543 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 SIX4Q9UIU6 781 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 TRAF3IP3Q9Y228 551 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 CCL26Q9Y258 94 aa16.31■□□□□ 0.2
RPL28-206ENST00000558752 MAPK13O15264 365 aa16.3■□□□□ 0.2
RPL28-206ENST00000558752 APBB3O95704 486 aa16.3■□□□□ 0.2
RPL28-206ENST00000558752 EGFP01133 1207 aa16.3■□□□□ 0.2
RPL28-206ENST00000558752 CKMP06732 381 aa16.3■□□□□ 0.2
RPL28-206ENST00000558752 DLATP10515 647 aaKnown RBP16.3■□□□□ 0.2
RPL28-206ENST00000558752 RPL13P26373 211 aaKnown RBP16.3■□□□□ 0.2
RPL28-206ENST00000558752 PCSK1P29120 753 aa16.3■□□□□ 0.2
RPL28-206ENST00000558752 ATICP31939 592 aa16.3■□□□□ 0.2
RPL28-206ENST00000558752 GJA4P35212 333 aa16.3■□□□□ 0.2
RPL28-206ENST00000558752 MPLP40238 635 aa16.3■□□□□ 0.2
RPL28-206ENST00000558752 ENPEPQ07075 957 aa16.3■□□□□ 0.2
RPL28-206ENST00000558752 SF3A2Q15428 464 aaKnown RBP16.3■□□□□ 0.2
RPL28-206ENST00000558752 INTS6LQ5JSJ4 861 aaKnown RBP16.3■□□□□ 0.2
RPL28-206ENST00000558752 RNF43Q68DV7 783 aa16.3■□□□□ 0.2
RPL28-206ENST00000558752 TMEM150AQ86TG1 271 aa16.3■□□□□ 0.2
RPL28-206ENST00000558752 SPATA2LQ8IUW3 424 aaPredicted RBP16.3■□□□□ 0.2
RPL28-206ENST00000558752 GUF1Q8N442 669 aaKnown RBP16.3■□□□□ 0.2
RPL28-206ENST00000558752 OR5B17Q8NGF7 314 aa16.3■□□□□ 0.2
RPL28-206ENST00000558752 OSCP1Q8WVF1 389 aa16.3■□□□□ 0.2
RPL28-206ENST00000558752 FUBP3Q96I24 572 aaKnown RBP eCLIP16.3■□□□□ 0.2
RPL28-206ENST00000558752 MYRFLQ96LU7 910 aa16.3■□□□□ 0.2
RPL28-206ENST00000558752 GSDMAQ96QA5 445 aa16.3■□□□□ 0.2
RPL28-206ENST00000558752 ECT2Q9H8V3 914 aa16.3■□□□□ 0.2
RPL28-206ENST00000558752 TRPC7Q9HCX4 862 aa16.3■□□□□ 0.2
RPL28-206ENST00000558752 EBF1Q9UH73 591 aa16.3■□□□□ 0.2
RPL28-206ENST00000558752 FRMD4BQ9Y2L6 1034 aa16.3■□□□□ 0.2
RPL28-206ENST00000558752 ANK1P16157 1881 aa16.3■□□□□ 0.2
RPL28-206ENST00000558752 KIF26AQ9ULI4 1882 aaPredicted RBP16.3■□□□□ 0.2
RPL28-206ENST00000558752 CNOT1A5YKK6 2376 aaKnown RBP16.3■□□□□ 0.2
RPL28-206ENST00000558752 SDK1Q7Z5N4 2213 aa16.29■□□□□ 0.2
RPL28-206ENST00000558752 NOL4O94818 638 aa16.29■□□□□ 0.2
RPL28-206ENST00000558752 SMC2O95347 1197 aa16.29■□□□□ 0.2
RPL28-206ENST00000558752 STAU1O95793 577 aaKnown RBP16.29■□□□□ 0.2
RPL28-206ENST00000558752 CLDN10P78369 228 aa16.29■□□□□ 0.2
RPL28-206ENST00000558752 USP39Q53GS9 565 aaKnown RBP16.29■□□□□ 0.2
RPL28-206ENST00000558752 PLA2G2CQ5R387 149 aa16.29■□□□□ 0.2
RPL28-206ENST00000558752 N4BP2L1Q5TBK1 243 aaPredicted RBP16.29■□□□□ 0.2
RPL28-206ENST00000558752 PKN3Q6P5Z2 889 aa16.29■□□□□ 0.2
RPL28-206ENST00000558752 C4orf50Q6ZRC1 276 aa16.29■□□□□ 0.2
RPL28-206ENST00000558752 LIMS2Q7Z4I7 341 aa16.29■□□□□ 0.2
RPL28-206ENST00000558752 PDCL2Q8N4E4 241 aa16.29■□□□□ 0.2
RPL28-206ENST00000558752 ENGASEQ8NFI3 743 aa16.29■□□□□ 0.2
RPL28-206ENST00000558752 CCDC127Q96BQ5 260 aa16.29■□□□□ 0.2
RPL28-206ENST00000558752 CEP295NLQ96MC4 621 aa16.29■□□□□ 0.2
RPL28-206ENST00000558752 SNX9Q9Y5X1 595 aa16.29■□□□□ 0.2
RPL28-206ENST00000558752 DENND4CQ5VZ89 1909 aa16.28■□□□□ 0.2
RPL28-206ENST00000558752 GABRDO14764 452 aa16.28■□□□□ 0.2
RPL28-206ENST00000558752 TM4SF5O14894 197 aa16.28■□□□□ 0.2
RPL28-206ENST00000558752 IKBKBO14920 756 aa16.28■□□□□ 0.2
RPL28-206ENST00000558752 NR3C1P04150 777 aa16.28■□□□□ 0.2
RPL28-206ENST00000558752 ARSAP15289 507 aa16.28■□□□□ 0.2
RPL28-206ENST00000558752 PFKLP17858 780 aa16.28■□□□□ 0.2
RPL28-206ENST00000558752 PMLP29590 882 aa16.28■□□□□ 0.2
RPL28-206ENST00000558752 CDR1P51861 262 aa16.28■□□□□ 0.2
RPL28-206ENST00000558752 SHC2P98077 582 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms