RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 STXBP5Q5T5C0 1151 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 ARHGAP17Q68EM7 881 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 CLEC20AQ6ZU45 233 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 ENOSF1Q7L5Y1 443 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 LUZP1Q86V48 1076 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 NUP93Q8N1F7 819 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 RBBP8NLQ8NC74 664 aaPredicted RBP13.24□□□□□ -0.29
LRRC28-206ENST00000558471 ANKRD20A12PQ8NF67 263 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 RSAD2Q8WXG1 361 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 TFAP2BQ92481 460 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 JAKMIP2Q96AA8 810 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 TRMT2BQ96GJ1 504 aaKnown RBP13.24□□□□□ -0.29
LRRC28-206ENST00000558471 FAM81BQ96LP2 452 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 KCNK12Q9HB15 430 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 DMAP1Q9NPF5 467 aaPredicted RBP13.24□□□□□ -0.29
LRRC28-206ENST00000558471 GDE1Q9NZC3 331 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 DNAJC12Q9UKB3 198 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 AJAP1Q9UKB5 411 aaPredicted RBP13.24□□□□□ -0.29
LRRC28-206ENST00000558471 KIAA1257Q9ULG3 409 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 PATJQ8NI35 1801 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 ANHXE9PGG2 379 aa13.23□□□□□ -0.29
LRRC28-206ENST00000558471 TNFRSF10AO00220 468 aa13.23□□□□□ -0.29
LRRC28-206ENST00000558471 TNFRSF10BO14763 440 aa13.23□□□□□ -0.29
LRRC28-206ENST00000558471 CAVIN2O95810 425 aa13.23□□□□□ -0.29
LRRC28-206ENST00000558471 PAEPP09466 180 aa13.23□□□□□ -0.29
LRRC28-206ENST00000558471 FAM200BP0CF97 657 aa13.23□□□□□ -0.29
LRRC28-206ENST00000558471 VDRP11473 427 aa13.23□□□□□ -0.29
LRRC28-206ENST00000558471 CD19P15391 556 aa13.23□□□□□ -0.29
LRRC28-206ENST00000558471 CDC25CP30307 473 aa13.23□□□□□ -0.29
LRRC28-206ENST00000558471 ZNF132P52740 706 aa13.23□□□□□ -0.29
LRRC28-206ENST00000558471 CYP4F8P98187 520 aa13.23□□□□□ -0.29
LRRC28-206ENST00000558471 SGO2Q562F6 1265 aa13.23□□□□□ -0.29
LRRC28-206ENST00000558471 KLHDC7AQ5VTJ3 777 aa13.23□□□□□ -0.29
LRRC28-206ENST00000558471 PARM1Q6UWI2 310 aa13.23□□□□□ -0.29
LRRC28-206ENST00000558471 ZSWIM1Q9BR11 485 aa13.23□□□□□ -0.29
LRRC28-206ENST00000558471 RPP25Q9BUL9 199 aaKnown RBP13.23□□□□□ -0.29
LRRC28-206ENST00000558471 TTLL2Q9BWV7 592 aa13.23□□□□□ -0.29
LRRC28-206ENST00000558471 LSM14BQ9BX40 385 aaKnown RBP13.23□□□□□ -0.29
LRRC28-206ENST00000558471 DUSP16Q9BY84 665 aa13.23□□□□□ -0.29
LRRC28-206ENST00000558471 GPR88Q9GZN0 384 aa13.23□□□□□ -0.29
LRRC28-206ENST00000558471 UXTQ9UBK9 157 aaPredicted RBP13.23□□□□□ -0.29
LRRC28-206ENST00000558471 MUTYHQ9UIF7 546 aa13.23□□□□□ -0.29
LRRC28-206ENST00000558471 BDP1A6H8Y1 2624 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 LGALS16A8MUM7 142 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 HHLA1C9JL84 531 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 O00370 1275 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 TADA3O75528 432 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 KRT5P13647 590 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 NPR3P17342 541 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 KLK7P49862 253 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 IFRD2Q12894 506 aaPredicted RBP13.22□□□□□ -0.29
LRRC28-206ENST00000558471 HTR4Q13639 388 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 GOLGA7BQ2TAP0 167 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 FAM78AQ5JUQ0 283 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 FKBP15Q5T1M5 1219 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 GPR158Q5T848 1215 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 ANKRD52Q8NB46 1076 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 SCAMP5Q8TAC9 235 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 SHC3Q92529 594 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 FGF14Q92915 247 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 GCNAQ96QF7 691 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 SLC46A2Q9BY10 475 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 SLITRK6Q9H5Y7 841 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 TASP1Q9H6P5 420 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 IL37Q9NZH6 218 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 EHD2Q9NZN4 543 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 IGSF9Q9P2J2 1179 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 TSPAN16Q9UKR8 245 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 FHOD1Q9Y613 1164 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 NUMBLQ9Y6R0 609 aa13.22□□□□□ -0.29
LRRC28-206ENST00000558471 NUP210Q8TEM1 1887 aaPredicted RBP13.21□□□□□ -0.29
LRRC28-206ENST00000558471 FOXN3O00409 490 aaPredicted RBP13.21□□□□□ -0.29
LRRC28-206ENST00000558471 RTN3O95197 1032 aaPredicted RBP13.21□□□□□ -0.29
LRRC28-206ENST00000558471 UCHL3P15374 230 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 BRD2P25440 801 aaKnown RBP13.21□□□□□ -0.29
LRRC28-206ENST00000558471 YWHAQP27348 245 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 USP8P40818 1118 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 SLC5A3P53794 718 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 UBXN1Q04323 297 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 TAF10Q12962 218 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 SYCP1Q15431 976 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 CNGA2Q16280 664 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 PTPN21Q16825 1174 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 ARHGAP15Q53QZ3 475 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 TXNDC8Q6A555 127 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 TANGO2Q6ICL3 276 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 LRSAM1Q6UWE0 723 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 MTSS1LQ765P7 747 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 GPRIN1Q7Z2K8 1008 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 TTC30AQ86WT1 665 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 GPIHBP1Q8IV16 184 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 SLC44A3Q8N4M1 653 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 MAB21L3Q8N8X9 362 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 UBA3Q8TBC4 463 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 ZSCAN18Q8TBC5 510 aaPredicted RBP13.21□□□□□ -0.29
LRRC28-206ENST00000558471 MRPS31Q92665 395 aaKnown RBP13.21□□□□□ -0.29
LRRC28-206ENST00000558471 SMARCD2Q92925 531 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 NXPE3Q969Y0 559 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 ASB16Q96NS5 453 aa13.21□□□□□ -0.29
LRRC28-206ENST00000558471 NAA15Q9BXJ9 866 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms