RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 PRKCSHP14314 528 aaPredicted RBP11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 NCKAP1LP55160 1127 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 FKBP3Q00688 224 aaKnown RBP11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 LRRC63Q05C16 580 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 SLC39A12Q504Y0 691 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 TMEM196Q5HYL7 178 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 C9orf57Q5W0N0 161 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 CEP135Q66GS9 1140 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 JADE1Q6IE81 842 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 ARMCX5Q6P1M9 558 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 TMEM150AQ86TG1 271 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 ITIH5Q86UX2 942 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 LRRTM3Q86VH5 581 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 VSTM4Q8IW00 320 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 CACTINQ8WUQ7 758 aaKnown RBP11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 FAM212AQ96EL1 285 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 BICD1Q96G01 975 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 SEPT5Q99719 369 aaPredicted RBP11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 TSG101Q99816 390 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 STRA6Q9BX79 667 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 ZCWPW1Q9H0M4 648 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 FBRSL1Q9HCM7 1045 aaKnown RBP11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 HSFX1Q9UBD0 423 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 KCNG1Q9UIX4 513 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 RALYQ9UKM9 306 aaKnown RBP11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 LAMA1P25391 3075 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 PIRO00625 290 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 OGTO15294 1046 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 CYP11A1P05108 521 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 ODC1P11926 461 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 MTIF2P46199 727 aaKnown RBP11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 CASP4P49662 377 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 MGAT5BQ3V5L5 792 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 PLA2G2CQ5R387 149 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 TRIM68Q6AZZ1 485 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 C12orf50Q8NA57 414 aaPredicted RBP11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 RIN3Q8TB24 985 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 CPLX3Q8WVH0 158 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 KCNN1Q92952 543 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 THG1LQ9NWX6 298 aaKnown RBP11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 MAGEC2Q9UBF1 373 aaPredicted RBP11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 SEL1LQ9UBV2 794 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 CCL26Q9Y258 94 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 PCDHB13Q9Y5F0 798 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 MYO16Q9Y6X6 1858 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 NUP205Q92621 2012 aa11.97□□□□□ -0.49
RABGGTA-204ENST00000558376 A0A0B4J269 797 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 CCDC163A0A0D9SF12 145 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 ANO9A1A5B4 782 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 PDXKO00764 312 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 TRDMT1O14717 391 aaKnown RBP11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 XPOTO43592 962 aaKnown RBP11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 PPP1R37O75864 691 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 KIF20AO95235 890 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 EGFP01133 1207 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 PIGRP01833 764 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 NFICP08651 508 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 HAPLN1P10915 354 aaPredicted RBP11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 ARSAP15289 507 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 NR2F2P24468 414 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 EEF1GP26641 437 aaKnown RBP11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 CDC25CP30307 473 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 TUFMP49411 452 aaKnown RBP11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 LIG4P49917 911 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 SHC2P98077 582 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 UBXN1Q04323 297 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 RUNX3Q13761 415 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 BMT2Q1RMZ1 405 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 MIIPQ5JXC2 388 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 NAIF1Q69YI7 327 aaPredicted RBP11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 SLC39A4Q6P5W5 647 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 ZSWIM2Q8NEG5 633 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 NOC3LQ8WTT2 800 aaKnown RBP11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 TSPAN18Q96SJ8 248 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 EBF3Q9H4W6 596 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 TBX20Q9UMR3 447 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 TRAF3IP3Q9Y228 551 aa11.96□□□□□ -0.49
RABGGTA-204ENST00000558376 GON4LQ3T8J9 2241 aa11.96□□□□□ -0.5
RABGGTA-204ENST00000558376 IGF2RP11717 2491 aa11.96□□□□□ -0.5
RABGGTA-204ENST00000558376 RNF225M0QZC1 329 aaPredicted RBP11.95□□□□□ -0.5
RABGGTA-204ENST00000558376 F11P03951 625 aa11.95□□□□□ -0.5
RABGGTA-204ENST00000558376 NR3C1P04150 777 aa11.95□□□□□ -0.5
RABGGTA-204ENST00000558376 HMGA1P17096 107 aaKnown RBP11.95□□□□□ -0.5
RABGGTA-204ENST00000558376 KLK7P49862 253 aa11.95□□□□□ -0.5
RABGGTA-204ENST00000558376 VEPH1Q14D04 833 aa11.95□□□□□ -0.5
RABGGTA-204ENST00000558376 KYAT1Q16773 422 aa11.95□□□□□ -0.5
RABGGTA-204ENST00000558376 SYCP3Q8IZU3 236 aa11.95□□□□□ -0.5
RABGGTA-204ENST00000558376 CMTM8Q8IZV2 173 aa11.95□□□□□ -0.5
RABGGTA-204ENST00000558376 RDH13Q8NBN7 331 aa11.95□□□□□ -0.5
RABGGTA-204ENST00000558376 USP13Q92995 863 aaPredicted RBP11.95□□□□□ -0.5
RABGGTA-204ENST00000558376 ZC3H10Q96K80 434 aaKnown RBP11.95□□□□□ -0.5
RABGGTA-204ENST00000558376 PCIF1Q9H4Z3 704 aa11.95□□□□□ -0.5
RABGGTA-204ENST00000558376 CPSF3Q9UKF6 684 aaKnown RBP11.95□□□□□ -0.5
RABGGTA-204ENST00000558376 SLC8A2Q9UPR5 921 aa11.95□□□□□ -0.5
RABGGTA-204ENST00000558376 THADAQ6YHU6 1953 aa11.95□□□□□ -0.5
RABGGTA-204ENST00000558376 KIAA1549LQ6ZVL6 1849 aa11.95□□□□□ -0.5
RABGGTA-204ENST00000558376 GOLGA6L6A8MZA4 724 aa11.95□□□□□ -0.5
RABGGTA-204ENST00000558376 CYB561D2O14569 222 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms