RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 KRT82Q9NSB4 513 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 CD207Q9UJ71 328 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 MYO16Q9Y6X6 1858 aa11.08□□□□□ -0.64
LRRC28-204ENST00000558172 DENND4AQ7Z401 1863 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 SLC38A8A6NNN8 435 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 XPO1O14980 1071 aaKnown RBP11.07□□□□□ -0.64
LRRC28-204ENST00000558172 CCL16O15467 120 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 SOAT2O75908 522 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 MICAL2O94851 1124 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 RTN3O95197 1032 aaPredicted RBP11.07□□□□□ -0.64
LRRC28-204ENST00000558172 ADCY5O95622 1261 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 FGF19O95750 216 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 KCNA5P22460 613 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 MTHFRP42898 656 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 CDR1P51861 262 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 PDE4CQ08493 712 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 ASIC2Q16515 512 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 PUS10Q3MIT2 529 aaKnown RBP11.07□□□□□ -0.64
LRRC28-204ENST00000558172 PKDCCQ504Y2 493 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 CYP4A22Q5TCH4 519 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 TMC5Q6UXY8 1006 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 DENND5BQ6ZUT9 1274 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 TMC6Q7Z403 805 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 IRF2BP2Q7Z5L9 587 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.07□□□□□ -0.64
LRRC28-204ENST00000558172 DNAJB7Q7Z6W7 309 aaPredicted RBP11.07□□□□□ -0.64
LRRC28-204ENST00000558172 TTC30AQ86WT1 665 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 CNGA4Q8IV77 575 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 DRC7Q8IY82 874 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 C12orf76Q8N812 135 aaPredicted RBP11.07□□□□□ -0.64
LRRC28-204ENST00000558172 SMRP1Q8NCR6 262 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 ZMIZ2Q8NF64 920 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 EPS8L1Q8TE68 723 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 GIPC2Q8TF65 315 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 STK32AQ8WU08 396 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 ZNF707Q96C28 371 aaPredicted RBP11.07□□□□□ -0.64
LRRC28-204ENST00000558172 TRMT2BQ96GJ1 504 aaKnown RBP11.07□□□□□ -0.64
LRRC28-204ENST00000558172 NECTIN4Q96NY8 510 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 KCNK16Q96T55 309 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 ZSWIM1Q9BR11 485 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 LHX5Q9H2C1 402 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 ACP6Q9NPH0 428 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 AVENQ9NQS1 362 aaPredicted RBP11.07□□□□□ -0.64
LRRC28-204ENST00000558172 UXTQ9UBK9 157 aaPredicted RBP11.07□□□□□ -0.64
LRRC28-204ENST00000558172 CEP83Q9Y592 693 aa11.07□□□□□ -0.64
LRRC28-204ENST00000558172 BZW2Q9Y6E2 419 aaKnown RBP11.07□□□□□ -0.64
LRRC28-204ENST00000558172 DOCK8Q8NF50 2099 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 M0QYV0 167 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 ZNF197O14709 1029 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 TNFRSF10BO14763 440 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 BEST1O76090 585 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 CALCAP01258 141 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 PRKCIP41743 596 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 GPD2P43304 727 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 PLA2G4AP47712 749 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 PPP3CCP48454 512 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 GPR15P49685 360 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 MRE11P49959 708 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 CACNA2D1P54289 1103 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 SNX16P57768 344 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 CDR2Q01850 454 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 ARID5AQ03989 594 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 TBX2Q13207 712 aaPredicted RBP11.06□□□□□ -0.64
LRRC28-204ENST00000558172 SMAD4Q13485 552 aaKnown RBP11.06□□□□□ -0.64
LRRC28-204ENST00000558172 ARID5BQ14865 1188 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 AAK1Q2M2I8 961 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 LEXMQ3ZCV2 418 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 PABPC1LQ4VXU2 614 aaKnown RBP11.06□□□□□ -0.64
LRRC28-204ENST00000558172 TRIM72Q6ZMU5 477 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 NOP9Q86U38 636 aaKnown RBP11.06□□□□□ -0.64
LRRC28-204ENST00000558172 TMEM35BQ8NCS4 154 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 OR8K1Q8NGG5 319 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 UBA3Q8TBC4 463 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 SLC35F5Q8WV83 523 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 KCTD13Q8WZ19 329 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 DDX1Q92499 740 aaKnown RBP11.06□□□□□ -0.64
LRRC28-204ENST00000558172 SECISBP2LQ93073 1101 aaKnown RBP11.06□□□□□ -0.64
LRRC28-204ENST00000558172 HSFY1Q96LI6 401 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 MYRFLQ96LU7 910 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 NOX5Q96PH1 765 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 FBXO44Q9H4M3 255 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 CYLDQ9NQC7 956 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 ASAH2Q9NR71 780 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 TMEM30AQ9NV96 361 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 ZNHIT6Q9NWK9 470 aaKnown RBP11.06□□□□□ -0.64
LRRC28-204ENST00000558172 IL37Q9NZH6 218 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 DNMT3BQ9UBC3 853 aaKnown RBP11.06□□□□□ -0.64
LRRC28-204ENST00000558172 NOCTQ9UK39 431 aaKnown RBP11.06□□□□□ -0.64
LRRC28-204ENST00000558172 FAM50BQ9Y247 325 aa11.06□□□□□ -0.64
LRRC28-204ENST00000558172 REV3LO60673 3130 aa11.05□□□□□ -0.64
LRRC28-204ENST00000558172 GOLGA6L6A8MZA4 724 aa11.05□□□□□ -0.64
LRRC28-204ENST00000558172 HHLA1C9JL84 531 aa11.05□□□□□ -0.64
LRRC28-204ENST00000558172 AKR1B15C9JRZ8 316 aaPredicted RBP11.05□□□□□ -0.64
LRRC28-204ENST00000558172 H3BQ06 376 aaPredicted RBP11.05□□□□□ -0.64
LRRC28-204ENST00000558172 LSM8O95777 96 aaKnown RBP11.05□□□□□ -0.64
LRRC28-204ENST00000558172 SERPING1P05155 500 aa11.05□□□□□ -0.64
LRRC28-204ENST00000558172 HMGA1P17096 107 aaKnown RBP11.05□□□□□ -0.64
LRRC28-204ENST00000558172 YWHAQP27348 245 aa11.05□□□□□ -0.64
LRRC28-204ENST00000558172 CDC25CP30307 473 aa11.05□□□□□ -0.64
LRRC28-204ENST00000558172 HNRNPH3P31942 346 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms