RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 KIF2CQ99661 725 aa5.58□□□□□ -1.52
SPG11-208ENST00000558155 PI4K2AQ9BTU6 479 aa5.58□□□□□ -1.52
SPG11-208ENST00000558155 TRPC7Q9HCX4 862 aa5.58□□□□□ -1.52
SPG11-208ENST00000558155 DNAAF2Q9NVR5 837 aaKnown RBP5.58□□□□□ -1.52
SPG11-208ENST00000558155 KIAA1522Q9P206 1035 aaPredicted RBP5.58□□□□□ -1.52
SPG11-208ENST00000558155 LARSQ9P2J5 1176 aaKnown RBP5.58□□□□□ -1.52
SPG11-208ENST00000558155 DERAQ9Y315 318 aa5.58□□□□□ -1.52
SPG11-208ENST00000558155 IGF2RP11717 2491 aa5.58□□□□□ -1.52
SPG11-208ENST00000558155 PTPRDP23468 1912 aa5.58□□□□□ -1.52
SPG11-208ENST00000558155 ANK1P16157 1881 aa5.58□□□□□ -1.52
SPG11-208ENST00000558155 MYO16Q9Y6X6 1858 aa5.58□□□□□ -1.52
SPG11-208ENST00000558155 ZFYVE26Q68DK2 2539 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 TCHHQ07283 1943 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 PLXNB3Q9ULL4 1909 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 A0A1W2PQD8 194 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 ANO9A1A5B4 782 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 KPNA7A9QM74 516 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.57□□□□□ -1.52
SPG11-208ENST00000558155 SGK1O00141 431 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 PPEF2O14830 753 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 SH3BP5O60239 455 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 ZNF217O75362 1048 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 NOL4O94818 638 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 KAT7O95251 611 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 NFICP08651 508 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 FTH1P19P0C7X4 201 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 GNSP15586 552 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 CDC25AP30304 524 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 GRIA2P42262 883 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 TRAPPC10P48553 1259 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 MYL7Q01449 175 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 ZNF33AQ06730 810 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 MAPK7Q13164 816 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 GNL2Q13823 731 aaKnown RBP5.57□□□□□ -1.52
SPG11-208ENST00000558155 TMEM132DQ14C87 1099 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 ENOX2Q16206 610 aaKnown RBP5.57□□□□□ -1.52
SPG11-208ENST00000558155 DDR2Q16832 855 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 TTC38Q5R3I4 469 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 SYCP2LQ5T4T6 812 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 SDHAF4Q5VUM1 108 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 PEAR1Q5VY43 1037 aaPredicted RBP5.57□□□□□ -1.52
SPG11-208ENST00000558155 JADE1Q6IE81 842 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 SDE2Q6IQ49 451 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 TRMT11Q7Z4G4 463 aaKnown RBP5.57□□□□□ -1.52
SPG11-208ENST00000558155 SKAP1Q86WV1 359 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 RGL4Q8IZJ4 473 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 KCTD17Q8N5Z5 321 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 DEFB119Q8N690 84 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 ALLCQ8N6M5 410 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 FRMD1Q8N878 549 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 NECAB1Q8N987 351 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 IL17RCQ8NAC3 791 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 NSUN7Q8NE18 718 aaKnown RBP5.57□□□□□ -1.52
SPG11-208ENST00000558155 RIN3Q8TB24 985 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 KCNV2Q8TDN2 545 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 PNMA5Q96PV4 448 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 ACBD6Q9BR61 282 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 RUSC1Q9BVN2 902 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 CCSER1Q9C0I3 900 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 HAPLN2Q9GZV7 340 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 FAM124BQ9H5Z6 455 aaPredicted RBP5.57□□□□□ -1.52
SPG11-208ENST00000558155 ASB7Q9H672 318 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 CAPN10Q9HC96 672 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 ABCB6Q9NP58 842 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 DPP3Q9NY33 737 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 KCND2Q9NZV8 630 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 GCNT4Q9P109 453 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 SUSD2Q9UGT4 822 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 NOL7Q9UMY1 257 aaKnown RBP5.57□□□□□ -1.52
SPG11-208ENST00000558155 ARHGAP26Q9UNA1 814 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 RAXQ9Y2V3 346 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 C2CD2Q9Y426 696 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 MYOFQ9NZM1 2061 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 CEP295Q9C0D2 2601 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 SCN1AP35498 2009 aa5.57□□□□□ -1.52
SPG11-208ENST00000558155 ATXN2Q99700 1313 aaKnown RBP5.56□□□□□ -1.52
SPG11-208ENST00000558155 KIAA1549LQ6ZVL6 1849 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 TNRC6BQ9UPQ9 1833 aaKnown RBP5.56□□□□□ -1.52
SPG11-208ENST00000558155 ACACAQ13085 2346 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 A0A0B4J269 797 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 TCRBV21S2A2A0A5A6 115 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 TBC1D3BA6NDS4 549 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 LEFTY2O00292 366 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 HNRNPDLO14979 420 aaKnown RBP5.56□□□□□ -1.52
SPG11-208ENST00000558155 HUS1O60921 280 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 NDUFS2O75306 463 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 ADH1CP00326 375 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 HNRNPLP14866 589 aaKnown RBP eCLIP5.56□□□□□ -1.52
SPG11-208ENST00000558155 CYP2F1P24903 491 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 ABCD1P33897 745 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 EIF2DP41214 584 aaKnown RBP5.56□□□□□ -1.52
SPG11-208ENST00000558155 PNPLA4P41247 253 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 SLC6A11P48066 632 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 PPP3CCP48454 512 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 GPR15P49685 360 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 ATP2C1P98194 919 aaPredicted RBP5.56□□□□□ -1.52
SPG11-208ENST00000558155 POU5F1Q01860 360 aaKnown RBP5.56□□□□□ -1.52
SPG11-208ENST00000558155 RAD51AP2Q09MP3 1159 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 USP4Q13107 963 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 RESTQ13127 1097 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms