RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 CMTM8Q8IZV2 173 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 MAB21L3Q8N8X9 362 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 B3GALNT2Q8NCR0 500 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 TAF4BQ92750 862 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 USP13Q92995 863 aaPredicted RBP9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 CLDN23Q96B33 292 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 EEF2KMTQ96G04 330 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 ZFYVE19Q96K21 471 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 C8orf48Q96LL4 319 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 CEP295NLQ96MC4 621 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 NELL2Q99435 816 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 B3GNT5Q9BYG0 378 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 SMG9Q9H0W8 520 aaKnown RBP9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 RMND1Q9NWS8 449 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 UXTQ9UBK9 157 aaPredicted RBP9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 CCL26Q9Y258 94 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 GVINP1Q7Z2Y8 2422 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 ZNF292O60281 2723 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 GPR179Q6PRD1 2367 aa9.36□□□□□ -0.91
SNRPA1-206ENST00000558059 HELZP42694 1942 aaKnown RBP9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 PROB1E7EW31 1015 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 F8VP50 259 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 TK2O00142 265 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 CLDN5O00501 218 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 MAN2B1O00754 1011 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 DPYSL4O14531 572 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 HRO43593 1189 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 SMC2O95347 1197 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 KRT13P13646 458 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 GRIK1P39086 918 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 NBL1P41271 181 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 GCLMP48507 274 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 PMS1P54277 932 aaKnown RBP9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 MLLT6P55198 1093 aaPredicted RBP9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 USP46P62068 366 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 OTOGLQ3ZCN5 2332 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 ARHGAP29Q52LW3 1261 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 SPOPLQ6IQ16 392 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 PAQR9Q6ZVX9 377 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 C1orf210Q8IVY1 113 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 ZC3H3Q8IXZ2 948 aaKnown RBP9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 YAF2Q8IY57 180 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 MAML2Q8IZL2 1156 aaPredicted RBP9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 ADSSL1Q8N142 457 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 CELF5Q8N6W0 485 aaKnown RBP9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 RIN3Q8TB24 985 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 BPIFB1Q8TDL5 484 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 TAS1R2Q8TE23 839 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 MRPS31Q92665 395 aaKnown RBP9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 SMARCE1Q969G3 411 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 SLC22A12Q96S37 553 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 TTLL2Q9BWV7 592 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 ZNF518BQ9C0D4 1074 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 APOBEC3GQ9HC16 384 aaKnown RBP9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 TDP1Q9NUW8 608 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 GCNT4Q9P109 453 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 PIAS3Q9Y6X2 628 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 SPTBN4Q9H254 2564 aa9.35□□□□□ -0.91
SNRPA1-206ENST00000558059 TRIM66O15016 1216 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 CETN3O15182 167 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 P4HA1P13674 534 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 CCNE1P24864 410 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 GTF2H1P32780 548 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 AVPR1AP37288 418 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 PIK3CAP42336 1068 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 MAGEA9P43362 315 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 ASPAP45381 313 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 RPS9P46781 194 aaKnown RBP9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 SOX9P48436 509 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 NOP14P78316 857 aaKnown RBP9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 TNK2Q07912 1038 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 ZNF268Q14587 947 aaPredicted RBP9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 ANKRD40Q6AI12 368 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 TXNDC11Q6PKC3 985 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 DENND5BQ6ZUT9 1274 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 ACOT1Q86TX2 421 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 FUKQ8N0W3 1084 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 CRYBG2Q8N1P7 616 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 CSGALNACT1Q8TDX6 532 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 FAM3CQ92520 227 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 SEMA4DQ92854 862 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 CYP2S1Q96SQ9 504 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 FAM83CQ9BQN1 747 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 BCO2Q9BYV7 579 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 ELOVL4Q9GZR5 314 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 C8orf33Q9H7E9 229 aaPredicted RBP9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 TMEM8AQ9HCN3 771 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 GKN1Q9NS71 199 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 GTSE1Q9NYZ3 720 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 HMGXB4Q9UGU5 601 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 MAN1B1Q9UKM7 699 aa9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 NDRG2Q9UN36 371 aaKnown RBP9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 MRPS17Q9Y2R5 130 aaKnown RBP9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 MYO18AQ92614 2054 aaKnown RBP9.34□□□□□ -0.91
SNRPA1-206ENST00000558059 TRAV19A0A0A6YYK7 116 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 C2orf78A6NCI8 922 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 TRIM49BA6NDI0 452 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 ZNF840PA6NDX5 716 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 SPECC1L-ADORA2AF8WAN1 911 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms