RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 MOCOSQ96EN8 888 aa12.91□□□□□ -0.34
LDLR-205ENST00000557933 NSL1Q96IY1 281 aa12.91□□□□□ -0.34
LDLR-205ENST00000557933 MSTO1Q9BUK6 570 aa12.91□□□□□ -0.34
LDLR-205ENST00000557933 MRPL47Q9HD33 250 aaKnown RBP12.91□□□□□ -0.34
LDLR-205ENST00000557933 CYLDQ9NQC7 956 aa12.91□□□□□ -0.34
LDLR-205ENST00000557933 HEY1Q9Y5J3 304 aa12.91□□□□□ -0.34
LDLR-205ENST00000557933 hCG_2014768A0A024R1R8 64 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 ARHGAP42A6NI28 874 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 TRIM49D1C9J1S8 452 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 KRT19P08727 400 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 CDKN2BP42772 138 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 SLC25A3Q00325 362 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 NCOA4Q13772 614 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 ZACNQ401N2 412 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 TFDP3Q5H9I0 405 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 MROH9Q5TGP6 573 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 C16orf46Q6P387 395 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 RSPH3Q86UC2 560 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 ARFGAP1Q8N6T3 406 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 BBOF1Q8ND07 529 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 GSTCDQ8NEC7 633 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 SH3TC2Q8TF17 1288 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 DCAKDQ8WVC6 231 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 TUBGCP5Q96RT8 1024 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 SH3GL3Q99963 347 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 IQCGQ9H095 443 aaKnown RBP12.9□□□□□ -0.34
LDLR-205ENST00000557933 AVENQ9NQS1 362 aaPredicted RBP12.9□□□□□ -0.34
LDLR-205ENST00000557933 PCMTD2Q9NV79 361 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 PARVAQ9NVD7 372 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 TMOD2Q9NZR1 351 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 SCOCQ9UIL1 159 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 CTDP1Q9Y5B0 961 aaPredicted RBP12.9□□□□□ -0.34
LDLR-205ENST00000557933 MYO18AQ92614 2054 aaKnown RBP12.9□□□□□ -0.34
LDLR-205ENST00000557933 LOC100653049A0A140TA62 436 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 WDR64B1ANS9 1081 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 MAGEB2O15479 319 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 KRT34O76011 436 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 GJB1P08034 283 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 CRADDP78560 199 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 MRPS35P82673 323 aaKnown RBP12.9□□□□□ -0.34
LDLR-205ENST00000557933 TFAMQ00059 246 aaKnown RBP12.9□□□□□ -0.34
LDLR-205ENST00000557933 PRKCEQ02156 737 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 FSTL1Q12841 308 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 PPP6R3Q5H9R7 873 aaPredicted RBP12.9□□□□□ -0.34
LDLR-205ENST00000557933 FKBP1CQ5VVH2 108 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 BSPRYQ5W0U4 402 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 PLEKHA7Q6IQ23 1121 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 C12orf56Q8IXR9 622 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 TEX9Q8N6V9 391 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 CEP120Q8N960 986 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 BANPQ8N9N5 519 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 PTCD3Q96EY7 689 aaKnown RBP12.9□□□□□ -0.34
LDLR-205ENST00000557933 OXNAD1Q96HP4 312 aaPredicted RBP12.9□□□□□ -0.34
LDLR-205ENST00000557933 MAGEB5Q9BZ81 275 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 TRIM4Q9C037 500 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 SYNCQ9H7C4 482 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 CPSF2Q9P2I0 782 aaKnown RBP12.9□□□□□ -0.34
LDLR-205ENST00000557933 SLC9A2Q9UBY0 812 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 ACTL7BQ9Y614 415 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 BPTFQ12830 3046 aa12.9□□□□□ -0.34
LDLR-205ENST00000557933 TMEM191CA6NGB0 347 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 SIGLEC16A6NMB1 481 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 PRR5-ARHGAP8B1AHC4 643 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 NFKBIEO00221 500 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 SNUPNO95149 360 aaKnown RBP12.89□□□□□ -0.35
LDLR-205ENST00000557933 C4BPAP04003 597 aaKnown RBP12.89□□□□□ -0.35
LDLR-205ENST00000557933 INHBAP08476 426 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 TMEM191BP0C7N4 346 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 MSX2P35548 267 aaPredicted RBP12.89□□□□□ -0.35
LDLR-205ENST00000557933 AQP5P55064 265 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 ARHGAP8P85298 464 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 BST1Q10588 318 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 CHI3L2Q15782 390 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 HSF5Q4G112 596 aaPredicted RBP12.89□□□□□ -0.35
LDLR-205ENST00000557933 RASIP1Q5U651 963 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 LPCAT4Q643R3 524 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 OR52E8Q6IFG1 317 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 HACE1Q8IYU2 909 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 ATP11CQ8NB49 1132 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 FAM136AQ96C01 138 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 ARHGEF4Q9NR80 690 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 POLIQ9UNA4 740 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 MAD1L1Q9Y6D9 718 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 AK5Q9Y6K8 562 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 TXNDC9O14530 226 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 ATP5HO75947 161 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 WFS1O76024 890 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 DLDP09622 509 aaKnown RBP12.89□□□□□ -0.35
LDLR-205ENST00000557933 SPATA31D3P0C874 917 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 RBP3P10745 1247 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 CD1EP15812 388 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 RAB27AP51159 221 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 CCNG1P51959 295 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 SLC34A1Q06495 639 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 MYBPC2Q14324 1141 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 MORF4L2Q15014 288 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 RALGPS1Q5JS13 557 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 EFHC2Q5JST6 749 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 C1orf146Q5VVC0 180 aa12.89□□□□□ -0.35
LDLR-205ENST00000557933 RIPOR1Q6ZS17 1223 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms