RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 DENND5BQ6ZUT9 1274 aa15.19■□□□□ 0.02
USP3-205ENST00000557884 GAREM2Q75VX8 874 aa15.19■□□□□ 0.02
USP3-205ENST00000557884 NPAS3Q8IXF0 933 aa15.19■□□□□ 0.02
USP3-205ENST00000557884 ZMIZ2Q8NF64 920 aa15.19■□□□□ 0.02
USP3-205ENST00000557884 TFAP2BQ92481 460 aa15.19■□□□□ 0.02
USP3-205ENST00000557884 SPATA17Q96L03 361 aa15.19■□□□□ 0.02
USP3-205ENST00000557884 FAM81BQ96LP2 452 aa15.19■□□□□ 0.02
USP3-205ENST00000557884 GCNAQ96QF7 691 aa15.19■□□□□ 0.02
USP3-205ENST00000557884 ATXN3LQ9H3M9 355 aa15.19■□□□□ 0.02
USP3-205ENST00000557884 SLITRK6Q9H5Y7 841 aa15.19■□□□□ 0.02
USP3-205ENST00000557884 IL21Q9HBE4 155 aa15.19■□□□□ 0.02
USP3-205ENST00000557884 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.19■□□□□ 0.02
USP3-205ENST00000557884 LIMD1Q9UGP4 676 aa15.19■□□□□ 0.02
USP3-205ENST00000557884 SIK3Q9Y2K2 1263 aa15.19■□□□□ 0.02
USP3-205ENST00000557884 BDP1A6H8Y1 2624 aa15.19■□□□□ 0.02
USP3-205ENST00000557884 SERPINC1P01008 464 aa15.18■□□□□ 0.02
USP3-205ENST00000557884 PAEPP09466 180 aa15.18■□□□□ 0.02
USP3-205ENST00000557884 VDRP11473 427 aa15.18■□□□□ 0.02
USP3-205ENST00000557884 UCHL3P15374 230 aa15.18■□□□□ 0.02
USP3-205ENST00000557884 NPR3P17342 541 aa15.18■□□□□ 0.02
USP3-205ENST00000557884 FILIP1LQ4L180 1135 aa15.18■□□□□ 0.02
USP3-205ENST00000557884 STXBP5Q5T5C0 1151 aa15.18■□□□□ 0.02
USP3-205ENST00000557884 TTC30AQ86WT1 665 aa15.18■□□□□ 0.02
USP3-205ENST00000557884 SHC3Q92529 594 aa15.18■□□□□ 0.02
USP3-205ENST00000557884 ZSWIM3Q96MP5 696 aa15.18■□□□□ 0.02
USP3-205ENST00000557884 NAP1L5Q96NT1 182 aaPredicted RBP15.18■□□□□ 0.02
USP3-205ENST00000557884 ZSWIM1Q9BR11 485 aa15.18■□□□□ 0.02
USP3-205ENST00000557884 COL25A1Q9BXS0 654 aaPredicted RBP15.18■□□□□ 0.02
USP3-205ENST00000557884 GANQ9H2C0 597 aa15.18■□□□□ 0.02
USP3-205ENST00000557884 ACP6Q9NPH0 428 aa15.18■□□□□ 0.02
USP3-205ENST00000557884 RTN4Q9NQC3 1192 aaKnown RBP15.18■□□□□ 0.02
USP3-205ENST00000557884 TSPAN16Q9UKR8 245 aa15.18■□□□□ 0.02
USP3-205ENST00000557884 CNTN6Q9UQ52 1028 aa15.18■□□□□ 0.02
USP3-205ENST00000557884 MUC3AQ02505 3323 aa15.18■□□□□ 0.02
USP3-205ENST00000557884 MTCL1Q9Y4B5 1905 aaKnown RBP15.17■□□□□ 0.02
USP3-205ENST00000557884 TCF20Q9UGU0 1960 aaKnown RBP15.17■□□□□ 0.02
USP3-205ENST00000557884 O00370 1275 aa15.17■□□□□ 0.02
USP3-205ENST00000557884 FOXN3O00409 490 aaPredicted RBP15.17■□□□□ 0.02
USP3-205ENST00000557884 EPHB6O15197 1021 aa15.17■□□□□ 0.02
USP3-205ENST00000557884 FGF19O95750 216 aa15.17■□□□□ 0.02
USP3-205ENST00000557884 ASGR2P07307 311 aa15.17■□□□□ 0.02
USP3-205ENST00000557884 LAMP2P13473 410 aa15.17■□□□□ 0.02
USP3-205ENST00000557884 CDC25CP30307 473 aa15.17■□□□□ 0.02
USP3-205ENST00000557884 SLC5A3P53794 718 aa15.17■□□□□ 0.02
USP3-205ENST00000557884 ZNF445P59923 1031 aa15.17■□□□□ 0.02
USP3-205ENST00000557884 POLR2FP61218 127 aaKnown RBP15.17■□□□□ 0.02
USP3-205ENST00000557884 FANCCQ00597 558 aa15.17■□□□□ 0.02
USP3-205ENST00000557884 DRAP1Q14919 205 aaPredicted RBP15.17■□□□□ 0.02
USP3-205ENST00000557884 GPRIN1Q7Z2K8 1008 aa15.17■□□□□ 0.02
USP3-205ENST00000557884 TMEM150AQ86TG1 271 aa15.17■□□□□ 0.02
USP3-205ENST00000557884 GPIHBP1Q8IV16 184 aa15.17■□□□□ 0.02
USP3-205ENST00000557884 ZDHHC14Q8IZN3 488 aa15.17■□□□□ 0.02
USP3-205ENST00000557884 NUP93Q8N1F7 819 aa15.17■□□□□ 0.02
USP3-205ENST00000557884 SCAMP5Q8TAC9 235 aa15.17■□□□□ 0.02
USP3-205ENST00000557884 UBA3Q8TBC4 463 aa15.17■□□□□ 0.02
USP3-205ENST00000557884 NAA15Q9BXJ9 866 aaKnown RBP15.17■□□□□ 0.02
USP3-205ENST00000557884 DUSP16Q9BY84 665 aa15.17■□□□□ 0.02
USP3-205ENST00000557884 CSNK1G1Q9HCP0 422 aa15.17■□□□□ 0.02
USP3-205ENST00000557884 PLCB1Q9NQ66 1216 aa15.17■□□□□ 0.02
USP3-205ENST00000557884 EPS15L1Q9UBC2 864 aa15.17■□□□□ 0.02
USP3-205ENST00000557884 UXTQ9UBK9 157 aaPredicted RBP15.17■□□□□ 0.02
USP3-205ENST00000557884 HESX1Q9UBX0 185 aa15.17■□□□□ 0.02
USP3-205ENST00000557884 KIAA1257Q9ULG3 409 aa15.17■□□□□ 0.02
USP3-205ENST00000557884 C2orf16Q68DN1 1984 aa15.16■□□□□ 0.02
USP3-205ENST00000557884 M0QYV0 167 aa15.16■□□□□ 0.02
USP3-205ENST00000557884 TULP2O00295 520 aa15.16■□□□□ 0.02
USP3-205ENST00000557884 TNFRSF10BO14763 440 aa15.16■□□□□ 0.02
USP3-205ENST00000557884 CYP26A1O43174 497 aa15.16■□□□□ 0.02
USP3-205ENST00000557884 TADA3O75528 432 aa15.16■□□□□ 0.02
USP3-205ENST00000557884 MICAL2O94851 1124 aa15.16■□□□□ 0.02
USP3-205ENST00000557884 F11P03951 625 aa15.16■□□□□ 0.02
USP3-205ENST00000557884 GNA15P30679 374 aa15.16■□□□□ 0.02
USP3-205ENST00000557884 TAF10Q12962 218 aa15.16■□□□□ 0.02
USP3-205ENST00000557884 GPR158Q5T848 1215 aa15.16■□□□□ 0.02
USP3-205ENST00000557884 RNF135Q8IUD6 432 aa15.16■□□□□ 0.02
USP3-205ENST00000557884 PLCD3Q8N3E9 789 aa15.16■□□□□ 0.02
USP3-205ENST00000557884 ANKRD52Q8NB46 1076 aa15.16■□□□□ 0.02
USP3-205ENST00000557884 NEK11Q8NG66 645 aa15.16■□□□□ 0.02
USP3-205ENST00000557884 RSAD2Q8WXG1 361 aa15.16■□□□□ 0.02
USP3-205ENST00000557884 TRMT2BQ96GJ1 504 aaKnown RBP15.16■□□□□ 0.02
USP3-205ENST00000557884 MYRFLQ96LU7 910 aa15.16■□□□□ 0.02
USP3-205ENST00000557884 CEP295NLQ96MC4 621 aa15.16■□□□□ 0.02
USP3-205ENST00000557884 ERGIC2Q96RQ1 377 aa15.16■□□□□ 0.02
USP3-205ENST00000557884 TTLL2Q9BWV7 592 aa15.16■□□□□ 0.02
USP3-205ENST00000557884 GPR88Q9GZN0 384 aa15.16■□□□□ 0.02
USP3-205ENST00000557884 NLRC4Q9NPP4 1024 aa15.16■□□□□ 0.02
USP3-205ENST00000557884 GDE1Q9NZC3 331 aa15.16■□□□□ 0.02
USP3-205ENST00000557884 A0A1B0GTH6 734 aa15.15■□□□□ 0.02
USP3-205ENST00000557884 HHLA1C9JL84 531 aa15.15■□□□□ 0.02
USP3-205ENST00000557884 THAP12O43422 761 aa15.15■□□□□ 0.02
USP3-205ENST00000557884 RTN3O95197 1032 aaPredicted RBP15.15■□□□□ 0.02
USP3-205ENST00000557884 RFX1P22670 979 aa15.15■□□□□ 0.02
USP3-205ENST00000557884 YWHAQP27348 245 aa15.15■□□□□ 0.02
USP3-205ENST00000557884 BCAT1P54687 386 aa15.15■□□□□ 0.02
USP3-205ENST00000557884 SLC8A3P57103 927 aa15.15■□□□□ 0.02
USP3-205ENST00000557884 PDE4CQ08493 712 aa15.15■□□□□ 0.02
USP3-205ENST00000557884 ARHGAP15Q53QZ3 475 aa15.15■□□□□ 0.02
USP3-205ENST00000557884 FAM78AQ5JUQ0 283 aa15.15■□□□□ 0.02
USP3-205ENST00000557884 TXNDC8Q6A555 127 aa15.15■□□□□ 0.02
USP3-205ENST00000557884 PARM1Q6UWI2 310 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms