RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 HDCP19113 662 aa15.6■□□□□ 0.09
SHMT2-235ENST00000557740 SDHBP21912 280 aa15.6■□□□□ 0.09
SHMT2-235ENST00000557740 HOXA6P31267 233 aa15.6■□□□□ 0.09
SHMT2-235ENST00000557740 AP3M2P53677 418 aa15.6■□□□□ 0.09
SHMT2-235ENST00000557740 ARHGAP8P85298 464 aa15.6■□□□□ 0.09
SHMT2-235ENST00000557740 SRSF5Q13243 272 aaKnown RBP15.6■□□□□ 0.09
SHMT2-235ENST00000557740 ZNF699Q32M78 642 aa15.6■□□□□ 0.09
SHMT2-235ENST00000557740 WDR5BQ86VZ2 330 aa15.6■□□□□ 0.09
SHMT2-235ENST00000557740 C8orf48Q96LL4 319 aa15.6■□□□□ 0.09
SHMT2-235ENST00000557740 DPEP3Q9H4B8 488 aa15.6■□□□□ 0.09
SHMT2-235ENST00000557740 ECT2Q9H8V3 914 aa15.6■□□□□ 0.09
SHMT2-235ENST00000557740 DLL3Q9NYJ7 618 aa15.6■□□□□ 0.09
SHMT2-235ENST00000557740 GCNT4Q9P109 453 aa15.6■□□□□ 0.09
SHMT2-235ENST00000557740 RCOR1Q9UKL0 485 aa15.6■□□□□ 0.09
SHMT2-235ENST00000557740 CDV3Q9UKY7 258 aaKnown RBP15.6■□□□□ 0.09
SHMT2-235ENST00000557740 ARHGAP26Q9UNA1 814 aa15.6■□□□□ 0.09
SHMT2-235ENST00000557740 SLC8A2Q9UPR5 921 aa15.6■□□□□ 0.09
SHMT2-235ENST00000557740 ATP8B3O60423 1300 aa15.6■□□□□ 0.09
SHMT2-235ENST00000557740 DMXL1Q9Y485 3027 aa15.59■□□□□ 0.09
SHMT2-235ENST00000557740 HRO43593 1189 aa15.59■□□□□ 0.09
SHMT2-235ENST00000557740 RNF40O75150 1001 aa15.59■□□□□ 0.09
SHMT2-235ENST00000557740 EGFP01133 1207 aa15.59■□□□□ 0.09
SHMT2-235ENST00000557740 PFKFB1P16118 471 aa15.59■□□□□ 0.09
SHMT2-235ENST00000557740 PFKLP17858 780 aa15.59■□□□□ 0.09
SHMT2-235ENST00000557740 DRD1P21728 446 aa15.59■□□□□ 0.09
SHMT2-235ENST00000557740 GJA4P35212 333 aa15.59■□□□□ 0.09
SHMT2-235ENST00000557740 PPP3CCP48454 512 aa15.59■□□□□ 0.09
SHMT2-235ENST00000557740 CASP4P49662 377 aa15.59■□□□□ 0.09
SHMT2-235ENST00000557740 USP46P62068 366 aa15.59■□□□□ 0.09
SHMT2-235ENST00000557740 NOP14P78316 857 aaKnown RBP15.59■□□□□ 0.09
SHMT2-235ENST00000557740 NR1H3Q13133 447 aa15.59■□□□□ 0.09
SHMT2-235ENST00000557740 PKN3Q6P5Z2 889 aa15.59■□□□□ 0.09
SHMT2-235ENST00000557740 B3GALNT2Q8NCR0 500 aa15.59■□□□□ 0.09
SHMT2-235ENST00000557740 ZNF516Q92618 1163 aa15.59■□□□□ 0.09
SHMT2-235ENST00000557740 CHFRQ96EP1 664 aa15.59■□□□□ 0.09
SHMT2-235ENST00000557740 PAGE5Q96GU1 130 aa15.59■□□□□ 0.09
SHMT2-235ENST00000557740 SPATA32Q96LK8 384 aa15.59■□□□□ 0.09
SHMT2-235ENST00000557740 TTLL2Q9BWV7 592 aa15.59■□□□□ 0.09
SHMT2-235ENST00000557740 ZNF518BQ9C0D4 1074 aa15.59■□□□□ 0.09
SHMT2-235ENST00000557740 GZF1Q9H116 711 aaPredicted RBP15.59■□□□□ 0.09
SHMT2-235ENST00000557740 XYLT2Q9H1B5 865 aa15.59■□□□□ 0.09
SHMT2-235ENST00000557740 SMYD3Q9H7B4 428 aa15.59■□□□□ 0.09
SHMT2-235ENST00000557740 USP25Q9UHP3 1055 aa15.59■□□□□ 0.09
SHMT2-235ENST00000557740 LRRIQ3A6PVS8 624 aaPredicted RBP15.58■□□□□ 0.08
SHMT2-235ENST00000557740 KLRC4O43908 158 aa15.58■□□□□ 0.08
SHMT2-235ENST00000557740 NFATC1O95644 943 aa15.58■□□□□ 0.08
SHMT2-235ENST00000557740 ABL1P00519 1130 aa15.58■□□□□ 0.08
SHMT2-235ENST00000557740 TCF3P15923 654 aa15.58■□□□□ 0.08
SHMT2-235ENST00000557740 GALK1P51570 392 aa15.58■□□□□ 0.08
SHMT2-235ENST00000557740 SPEM2Q0P670 501 aa15.58■□□□□ 0.08
SHMT2-235ENST00000557740 IFRD2Q12894 506 aaPredicted RBP15.58■□□□□ 0.08
SHMT2-235ENST00000557740 STK4Q13043 487 aa15.58■□□□□ 0.08
SHMT2-235ENST00000557740 PSMD2Q13200 908 aa15.58■□□□□ 0.08
SHMT2-235ENST00000557740 EML3Q32P44 896 aa15.58■□□□□ 0.08
SHMT2-235ENST00000557740 KMT5BQ4FZB7 885 aa15.58■□□□□ 0.08
SHMT2-235ENST00000557740 FBXO43Q4G163 708 aa15.58■□□□□ 0.08
SHMT2-235ENST00000557740 ZNF667Q5HYK9 610 aa15.58■□□□□ 0.08
SHMT2-235ENST00000557740 TDRD10Q5VZ19 366 aaKnown RBP15.58■□□□□ 0.08
SHMT2-235ENST00000557740 SCARA5Q6ZMJ2 495 aa15.58■□□□□ 0.08
SHMT2-235ENST00000557740 KIAA0895Q8NCT3 520 aa15.58■□□□□ 0.08
SHMT2-235ENST00000557740 PLEKHO2Q8TD55 490 aa15.58■□□□□ 0.08
SHMT2-235ENST00000557740 PARD3BQ8TEW8 1205 aa15.58■□□□□ 0.08
SHMT2-235ENST00000557740 CD101Q93033 1021 aa15.58■□□□□ 0.08
SHMT2-235ENST00000557740 SLITRK1Q96PX8 696 aa15.58■□□□□ 0.08
SHMT2-235ENST00000557740 PARD6AQ9NPB6 346 aa15.58■□□□□ 0.08
SHMT2-235ENST00000557740 NME7Q9Y5B8 376 aa15.58■□□□□ 0.08
SHMT2-235ENST00000557740 NCOR2Q9Y618 2525 aa15.57■□□□□ 0.08
SHMT2-235ENST00000557740 OBSL1O75147 1896 aa15.57■□□□□ 0.08
SHMT2-235ENST00000557740 A0A1B0GVL5 298 aa15.57■□□□□ 0.08
SHMT2-235ENST00000557740 ZNF840PA6NDX5 716 aa15.57■□□□□ 0.08
SHMT2-235ENST00000557740 CLDN5O00501 218 aa15.57■□□□□ 0.08
SHMT2-235ENST00000557740 LRP3O75074 770 aa15.57■□□□□ 0.08
SHMT2-235ENST00000557740 MYL1P05976 194 aa15.57■□□□□ 0.08
SHMT2-235ENST00000557740 P4HA1P13674 534 aa15.57■□□□□ 0.08
SHMT2-235ENST00000557740 CMA1P23946 247 aa15.57■□□□□ 0.08
SHMT2-235ENST00000557740 PXNP49023 591 aaPredicted RBP15.57■□□□□ 0.08
SHMT2-235ENST00000557740 KRT85P78386 507 aa15.57■□□□□ 0.08
SHMT2-235ENST00000557740 NCOA4Q13772 614 aa15.57■□□□□ 0.08
SHMT2-235ENST00000557740 NAIF1Q69YI7 327 aaPredicted RBP15.57■□□□□ 0.08
SHMT2-235ENST00000557740 CCDC47Q96A33 483 aaKnown RBP15.57■□□□□ 0.08
SHMT2-235ENST00000557740 ACDQ96AP0 544 aa15.57■□□□□ 0.08
SHMT2-235ENST00000557740 TNIP3Q96KP6 325 aa15.57■□□□□ 0.08
SHMT2-235ENST00000557740 MED10Q9BTT4 135 aa15.57■□□□□ 0.08
SHMT2-235ENST00000557740 B3GNT5Q9BYG0 378 aa15.57■□□□□ 0.08
SHMT2-235ENST00000557740 VRTNQ9H8Y1 702 aa15.57■□□□□ 0.08
SHMT2-235ENST00000557740 FBRSL1Q9HCM7 1045 aaKnown RBP15.57■□□□□ 0.08
SHMT2-235ENST00000557740 DENND4CQ5VZ89 1909 aa15.56■□□□□ 0.08
SHMT2-235ENST00000557740 DCHS1Q96JQ0 3298 aa15.56■□□□□ 0.08
SHMT2-235ENST00000557740 LEFTY2O00292 366 aa15.56■□□□□ 0.08
SHMT2-235ENST00000557740 PDXKO00764 312 aa15.56■□□□□ 0.08
SHMT2-235ENST00000557740 RPP40O75818 363 aaKnown RBP15.56■□□□□ 0.08
SHMT2-235ENST00000557740 RTN3O95197 1032 aaPredicted RBP15.56■□□□□ 0.08
SHMT2-235ENST00000557740 KIF20AO95235 890 aa15.56■□□□□ 0.08
SHMT2-235ENST00000557740 NR3C1P04150 777 aa15.56■□□□□ 0.08
SHMT2-235ENST00000557740 TGM1P22735 817 aa15.56■□□□□ 0.08
SHMT2-235ENST00000557740 RAP1GAPP47736 663 aa15.56■□□□□ 0.08
SHMT2-235ENST00000557740 CACNA2D1P54289 1103 aa15.56■□□□□ 0.08
SHMT2-235ENST00000557740 SLC7A9P82251 487 aa15.56■□□□□ 0.08
SHMT2-235ENST00000557740 TAF10Q12962 218 aa15.56■□□□□ 0.08
SHMT2-235ENST00000557740 FAM35AQ86V20 835 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms