RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 EIF3DO15371 548 aaKnown RBP eCLIP17.03■□□□□ 0.32
SCFD1-224ENST00000557713 TGFB1I1O43294 461 aa17.03■□□□□ 0.32
SCFD1-224ENST00000557713 TACC1O75410 805 aa17.03■□□□□ 0.32
SCFD1-224ENST00000557713 KRT37O76014 449 aa17.03■□□□□ 0.32
SCFD1-224ENST00000557713 APBB3O95704 486 aa17.03■□□□□ 0.32
SCFD1-224ENST00000557713 FAM163BP0C2L3 166 aa17.03■□□□□ 0.32
SCFD1-224ENST00000557713 GNL1P36915 607 aaPredicted RBP17.03■□□□□ 0.32
SCFD1-224ENST00000557713 OPRD1P41143 372 aa17.03■□□□□ 0.32
SCFD1-224ENST00000557713 PDE6CP51160 858 aa17.03■□□□□ 0.32
SCFD1-224ENST00000557713 CYP27A1Q02318 531 aa17.03■□□□□ 0.32
SCFD1-224ENST00000557713 PSMD2Q13200 908 aa17.03■□□□□ 0.32
SCFD1-224ENST00000557713 GAB4Q2WGN9 574 aa17.03■□□□□ 0.32
SCFD1-224ENST00000557713 STPG1Q5TH74 334 aa17.03■□□□□ 0.32
SCFD1-224ENST00000557713 CNNM4Q6P4Q7 775 aa17.03■□□□□ 0.32
SCFD1-224ENST00000557713 C8orf48Q96LL4 319 aa17.03■□□□□ 0.32
SCFD1-224ENST00000557713 MMS19Q96T76 1030 aa17.03■□□□□ 0.32
SCFD1-224ENST00000557713 MRPL45Q9BRJ2 306 aaKnown RBP17.03■□□□□ 0.32
SCFD1-224ENST00000557713 RNF38Q9H0F5 515 aa17.03■□□□□ 0.32
SCFD1-224ENST00000557713 CUEDC2Q9H467 287 aa17.03■□□□□ 0.32
SCFD1-224ENST00000557713 SMOC1Q9H4F8 434 aa17.03■□□□□ 0.32
SCFD1-224ENST00000557713 VPS45Q9NRW7 570 aa17.03■□□□□ 0.32
SCFD1-224ENST00000557713 ATG2BQ96BY7 2078 aa17.03■□□□□ 0.32
SCFD1-224ENST00000557713 EPG5Q9HCE0 2579 aa17.02■□□□□ 0.32
SCFD1-224ENST00000557713 STX6O43752 255 aa17.02■□□□□ 0.32
SCFD1-224ENST00000557713 PPP6R2O75170 966 aa17.02■□□□□ 0.32
SCFD1-224ENST00000557713 RHOBTB1O94844 696 aa17.02■□□□□ 0.32
SCFD1-224ENST00000557713 NFATC1O95644 943 aa17.02■□□□□ 0.32
SCFD1-224ENST00000557713 MPLP40238 635 aa17.02■□□□□ 0.32
SCFD1-224ENST00000557713 PPP3CCP48454 512 aa17.02■□□□□ 0.32
SCFD1-224ENST00000557713 NOP14P78316 857 aaKnown RBP17.02■□□□□ 0.32
SCFD1-224ENST00000557713 SLC7A9P82251 487 aa17.02■□□□□ 0.32
SCFD1-224ENST00000557713 STK38Q15208 465 aa17.02■□□□□ 0.32
SCFD1-224ENST00000557713 SNRNP35Q16560 246 aaKnown RBP17.02■□□□□ 0.32
SCFD1-224ENST00000557713 ADGRG2Q8IZP9 1017 aa17.02■□□□□ 0.32
SCFD1-224ENST00000557713 KIAA1958Q8N8K9 716 aa17.02■□□□□ 0.32
SCFD1-224ENST00000557713 RDH13Q8NBN7 331 aa17.02■□□□□ 0.32
SCFD1-224ENST00000557713 CCDC26Q8TAB7 109 aa17.02■□□□□ 0.32
SCFD1-224ENST00000557713 USP33Q8TEY7 942 aa17.02■□□□□ 0.32
SCFD1-224ENST00000557713 AGPAT3Q9NRZ7 376 aa17.02■□□□□ 0.32
SCFD1-224ENST00000557713 EHD2Q9NZN4 543 aa17.02■□□□□ 0.32
SCFD1-224ENST00000557713 KIAA1549LQ6ZVL6 1849 aa17.01■□□□□ 0.31
SCFD1-224ENST00000557713 ANTXRLA6NF34 631 aa17.01■□□□□ 0.31
SCFD1-224ENST00000557713 F8VP50 259 aa17.01■□□□□ 0.31
SCFD1-224ENST00000557713 TRIM66O15016 1216 aa17.01■□□□□ 0.31
SCFD1-224ENST00000557713 SPTLC2O15270 562 aa17.01■□□□□ 0.31
SCFD1-224ENST00000557713 OLFM2O95897 454 aa17.01■□□□□ 0.31
SCFD1-224ENST00000557713 PTPN1P18031 435 aaKnown RBP17.01■□□□□ 0.31
SCFD1-224ENST00000557713 TNNI1P19237 187 aa17.01■□□□□ 0.31
SCFD1-224ENST00000557713 ANXA13P27216 316 aa17.01■□□□□ 0.31
SCFD1-224ENST00000557713 CACNA2D1P54289 1103 aa17.01■□□□□ 0.31
SCFD1-224ENST00000557713 AMPD3Q01432 767 aa17.01■□□□□ 0.31
SCFD1-224ENST00000557713 PSMD6Q15008 389 aa17.01■□□□□ 0.31
SCFD1-224ENST00000557713 ELF2Q15723 593 aa17.01■□□□□ 0.31
SCFD1-224ENST00000557713 MDH1BQ5I0G3 518 aa17.01■□□□□ 0.31
SCFD1-224ENST00000557713 N4BP2L1Q5TBK1 243 aaPredicted RBP17.01■□□□□ 0.31
SCFD1-224ENST00000557713 ZNF516Q92618 1163 aa17.01■□□□□ 0.31
SCFD1-224ENST00000557713 CGRRF1Q99675 332 aa17.01■□□□□ 0.31
SCFD1-224ENST00000557713 C7orf25Q9BPX7 421 aa17.01■□□□□ 0.31
SCFD1-224ENST00000557713 GZF1Q9H116 711 aaPredicted RBP17.01■□□□□ 0.31
SCFD1-224ENST00000557713 SNX25Q9H3E2 840 aa17.01■□□□□ 0.31
SCFD1-224ENST00000557713 TMEM30AQ9NV96 361 aa17.01■□□□□ 0.31
SCFD1-224ENST00000557713 TFIP11Q9UBB9 837 aaKnown RBP17.01■□□□□ 0.31
SCFD1-224ENST00000557713 ACACBO00763 2458 aa17.01■□□□□ 0.31
SCFD1-224ENST00000557713 HELZP42694 1942 aaKnown RBP17■□□□□ 0.31
SCFD1-224ENST00000557713 BCLAF3A2AJT9 711 aaKnown RBP17■□□□□ 0.31
SCFD1-224ENST00000557713 STAU1O95793 577 aaKnown RBP17■□□□□ 0.31
SCFD1-224ENST00000557713 DLATP10515 647 aaKnown RBP17■□□□□ 0.31
SCFD1-224ENST00000557713 DGKEP52429 567 aa17■□□□□ 0.31
SCFD1-224ENST00000557713 SNRPFP62306 86 aaKnown RBP17■□□□□ 0.31
SCFD1-224ENST00000557713 ASIC1P78348 528 aa17■□□□□ 0.31
SCFD1-224ENST00000557713 CYP24A1Q07973 514 aa17■□□□□ 0.31
SCFD1-224ENST00000557713 EHHADHQ08426 723 aa17■□□□□ 0.31
SCFD1-224ENST00000557713 WDR72Q3MJ13 1102 aa17■□□□□ 0.31
SCFD1-224ENST00000557713 C2orf27AQ580R0 203 aa17■□□□□ 0.31
SCFD1-224ENST00000557713 FAM26FQ5R3K3 315 aa17■□□□□ 0.31
SCFD1-224ENST00000557713 SHC4Q6S5L8 630 aa17■□□□□ 0.31
SCFD1-224ENST00000557713 HS2ST1Q7LGA3 356 aa17■□□□□ 0.31
SCFD1-224ENST00000557713 FILIP1Q7Z7B0 1213 aa17■□□□□ 0.31
SCFD1-224ENST00000557713 PIAS4Q8N2W9 510 aaPredicted RBP17■□□□□ 0.31
SCFD1-224ENST00000557713 OR6B3Q8NGW1 331 aa17■□□□□ 0.31
SCFD1-224ENST00000557713 SCFD1Q8WVM8 642 aa17■□□□□ 0.31
SCFD1-224ENST00000557713 DHX58Q96C10 678 aa17■□□□□ 0.31
SCFD1-224ENST00000557713 LSM14BQ9BX40 385 aaKnown RBP17■□□□□ 0.31
SCFD1-224ENST00000557713 FOXD4L1Q9NU39 408 aa17■□□□□ 0.31
SCFD1-224ENST00000557713 MYO16Q9Y6X6 1858 aa17■□□□□ 0.31
SCFD1-224ENST00000557713 PTPRDP23468 1912 aa17■□□□□ 0.31
SCFD1-224ENST00000557713 TPRP12270 2363 aaKnown RBP16.99■□□□□ 0.31
SCFD1-224ENST00000557713 SPAG17Q6Q759 2223 aa16.99■□□□□ 0.31
SCFD1-224ENST00000557713 CLIC2O15247 247 aa16.99■□□□□ 0.31
SCFD1-224ENST00000557713 OAS1P00973 400 aaKnown RBP16.99■□□□□ 0.31
SCFD1-224ENST00000557713 CYP17A1P05093 508 aa16.99■□□□□ 0.31
SCFD1-224ENST00000557713 PMLP29590 882 aa16.99■□□□□ 0.31
SCFD1-224ENST00000557713 TAF10Q12962 218 aa16.99■□□□□ 0.31
SCFD1-224ENST00000557713 TDRD10Q5VZ19 366 aaKnown RBP16.99■□□□□ 0.31
SCFD1-224ENST00000557713 TCEAL6Q6IPX3 200 aa16.99■□□□□ 0.31
SCFD1-224ENST00000557713 RASSF3Q86WH2 238 aa16.99■□□□□ 0.31
SCFD1-224ENST00000557713 IQUBQ8NA54 791 aa16.99■□□□□ 0.31
SCFD1-224ENST00000557713 XXYLT1Q8NBI6 393 aa16.99■□□□□ 0.31
SCFD1-224ENST00000557713 TSTD1Q8NFU3 115 aa16.99■□□□□ 0.31
SCFD1-224ENST00000557713 TCEAL3Q969E4 200 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms