RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 BST2Q10589 180 aaKnown RBP16.16■□□□□ 0.18
NEDD1-213ENST00000557644 STILQ15468 1287 aa16.16■□□□□ 0.18
NEDD1-213ENST00000557644 MAFAQ8NHW3 353 aaPredicted RBP16.16■□□□□ 0.18
NEDD1-213ENST00000557644 C8orf48Q96LL4 319 aa16.16■□□□□ 0.18
NEDD1-213ENST00000557644 DNAJC7Q99615 494 aa16.16■□□□□ 0.18
NEDD1-213ENST00000557644 HAUS4Q9H6D7 363 aa16.16■□□□□ 0.18
NEDD1-213ENST00000557644 ABHD10Q9NUJ1 306 aa16.16■□□□□ 0.18
NEDD1-213ENST00000557644 HCFC1R1Q9NWW0 138 aa16.16■□□□□ 0.18
NEDD1-213ENST00000557644 ZDHHC7Q9NXF8 308 aa16.16■□□□□ 0.18
NEDD1-213ENST00000557644 CYTH4Q9UIA0 394 aa16.16■□□□□ 0.18
NEDD1-213ENST00000557644 HHLA1C9JL84 531 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 AKR1B15C9JRZ8 316 aaPredicted RBP16.15■□□□□ 0.18
NEDD1-213ENST00000557644 PLEKP08567 350 aaPredicted RBP16.15■□□□□ 0.18
NEDD1-213ENST00000557644 GPD2P43304 727 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 EPHB3P54753 998 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 RPL10AP62906 217 aaKnown RBP16.15■□□□□ 0.18
NEDD1-213ENST00000557644 CDR2Q01850 454 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 HGSNATQ68CP4 663 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 WDR59Q6PJI9 974 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 WDTC1Q8N5D0 677 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 TC2NQ8N9U0 490 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 OR8K1Q8NGG5 319 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 SCAMP5Q8TAC9 235 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 OLIG1Q8TAK6 271 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 SYN2Q92777 582 aaPredicted RBP16.15■□□□□ 0.18
NEDD1-213ENST00000557644 PRKD2Q9BZL6 878 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 NUCKS1Q9H1E3 243 aaKnown RBP16.15■□□□□ 0.18
NEDD1-213ENST00000557644 PCDHGC3Q9UN70 934 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 KCNA5P22460 613 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 ANXA13P27216 316 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 HOXA9P31269 272 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 RGS7P49802 495 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 USP46P62068 366 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 KLHL30Q0D2K2 578 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 PMF1Q6P1K2 205 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 ELMSAN1Q6PJG2 1045 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 ZNF571Q7Z3V5 609 aaPredicted RBP16.15■□□□□ 0.18
NEDD1-213ENST00000557644 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.15■□□□□ 0.18
NEDD1-213ENST00000557644 PIGZQ86VD9 579 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 SLC35F5Q8WV83 523 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 MSLNLQ96KJ4 702 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 PCDHB18PQ96TA0 734 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 PDCL3Q9H2J4 239 aa16.15■□□□□ 0.18
NEDD1-213ENST00000557644 UBE2ZQ9H832 354 aaPredicted RBP16.15■□□□□ 0.18
NEDD1-213ENST00000557644 MAGED2Q9UNF1 606 aaPredicted RBP16.15■□□□□ 0.18
NEDD1-213ENST00000557644 PIK3R2O00459 728 aa16.14■□□□□ 0.17
NEDD1-213ENST00000557644 TNFRSF10BO14763 440 aa16.14■□□□□ 0.17
NEDD1-213ENST00000557644 HNRNPA1P09651 372 aaKnown RBP eCLIP16.14■□□□□ 0.17
NEDD1-213ENST00000557644 CCDC172P0C7W6 258 aa16.14■□□□□ 0.17
NEDD1-213ENST00000557644 PRKCIP41743 596 aa16.14■□□□□ 0.17
NEDD1-213ENST00000557644 SLC5A3P53794 718 aa16.14■□□□□ 0.17
NEDD1-213ENST00000557644 IFRD2Q12894 506 aaPredicted RBP16.14■□□□□ 0.17
NEDD1-213ENST00000557644 DNAJB7Q7Z6W7 309 aaPredicted RBP16.14■□□□□ 0.17
NEDD1-213ENST00000557644 CNGA4Q8IV77 575 aa16.14■□□□□ 0.17
NEDD1-213ENST00000557644 HS6ST3Q8IZP7 471 aa16.14■□□□□ 0.17
NEDD1-213ENST00000557644 C1orf131Q8NDD1 294 aaKnown RBP16.14■□□□□ 0.17
NEDD1-213ENST00000557644 AGPAT1Q99943 283 aa16.14■□□□□ 0.17
NEDD1-213ENST00000557644 SYT11Q9BT88 431 aa16.14■□□□□ 0.17
NEDD1-213ENST00000557644 S1PR5Q9H228 398 aa16.14■□□□□ 0.17
NEDD1-213ENST00000557644 PRDM6Q9NQX0 595 aa16.14■□□□□ 0.17
NEDD1-213ENST00000557644 MYH10P35580 1976 aa16.14■□□□□ 0.17
NEDD1-213ENST00000557644 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.14■□□□□ 0.17
NEDD1-213ENST00000557644 SLC38A8A6NNN8 435 aa16.14■□□□□ 0.17
NEDD1-213ENST00000557644 XPO1O14980 1071 aaKnown RBP16.14■□□□□ 0.17
NEDD1-213ENST00000557644 GABBR2O75899 941 aa16.14■□□□□ 0.17
NEDD1-213ENST00000557644 HMGA1P17096 107 aaKnown RBP16.14■□□□□ 0.17
NEDD1-213ENST00000557644 NTHL1P78549 312 aa16.14■□□□□ 0.17
NEDD1-213ENST00000557644 ARID5BQ14865 1188 aa16.14■□□□□ 0.17
NEDD1-213ENST00000557644 RTL10Q7L3V2 364 aa16.14■□□□□ 0.17
NEDD1-213ENST00000557644 FMNL3Q8IVF7 1028 aa16.14■□□□□ 0.17
NEDD1-213ENST00000557644 SMG7Q92540 1137 aaKnown RBP16.14■□□□□ 0.17
NEDD1-213ENST00000557644 PSMG2Q969U7 264 aa16.14■□□□□ 0.17
NEDD1-213ENST00000557644 SPATA17Q96L03 361 aa16.14■□□□□ 0.17
NEDD1-213ENST00000557644 SEPT11Q9NVA2 429 aaKnown RBP16.14■□□□□ 0.17
NEDD1-213ENST00000557644 DNMT3BQ9UBC3 853 aaKnown RBP16.14■□□□□ 0.17
NEDD1-213ENST00000557644 DOCK6Q96HP0 2047 aa16.14■□□□□ 0.17
NEDD1-213ENST00000557644 NRG2O14511 850 aaPredicted RBP16.13■□□□□ 0.17
NEDD1-213ENST00000557644 SETSIPP0DME0 302 aa16.13■□□□□ 0.17
NEDD1-213ENST00000557644 HOXB8P17481 243 aaPredicted RBP16.13■□□□□ 0.17
NEDD1-213ENST00000557644 HNRNPH3P31942 346 aaKnown RBP16.13■□□□□ 0.17
NEDD1-213ENST00000557644 SLC8A3P57103 927 aa16.13■□□□□ 0.17
NEDD1-213ENST00000557644 PLD1Q13393 1074 aa16.13■□□□□ 0.17
NEDD1-213ENST00000557644 VEPH1Q14D04 833 aa16.13■□□□□ 0.17
NEDD1-213ENST00000557644 TDRD12Q587J7 1177 aaKnown RBP16.13■□□□□ 0.17
NEDD1-213ENST00000557644 DENND5BQ6ZUT9 1274 aa16.13■□□□□ 0.17
NEDD1-213ENST00000557644 GRASPQ7Z6J2 395 aaPredicted RBP16.13■□□□□ 0.17
NEDD1-213ENST00000557644 ZNF677Q86XU0 584 aa16.13■□□□□ 0.17
NEDD1-213ENST00000557644 ZNF512Q96ME7 567 aaPredicted RBP16.13■□□□□ 0.17
NEDD1-213ENST00000557644 CORO1BQ9BR76 489 aa16.13■□□□□ 0.17
NEDD1-213ENST00000557644 LHX5Q9H2C1 402 aa16.13■□□□□ 0.17
NEDD1-213ENST00000557644 ZNF334Q9HCZ1 680 aaPredicted RBP16.13■□□□□ 0.17
NEDD1-213ENST00000557644 ARHGAP20Q9P2F6 1191 aa16.13■□□□□ 0.17
NEDD1-213ENST00000557644 TJP2Q9UDY2 1190 aa16.13■□□□□ 0.17
NEDD1-213ENST00000557644 PLA2G4AP47712 749 aa16.13■□□□□ 0.17
NEDD1-213ENST00000557644 NUP93Q8N1F7 819 aa16.13■□□□□ 0.17
NEDD1-213ENST00000557644 CMASQ8NFW8 434 aaPredicted RBP16.13■□□□□ 0.17
NEDD1-213ENST00000557644 CPA5Q8WXQ8 436 aa16.13■□□□□ 0.17
NEDD1-213ENST00000557644 HLA-CQ95604 372 aa16.13■□□□□ 0.17
NEDD1-213ENST00000557644 PIDD1Q9HB75 910 aa16.13■□□□□ 0.17
NEDD1-213ENST00000557644 XYLBO75191 536 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms