RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 GRAMD1AQ96CP6 724 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 HVCN1Q96D96 273 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 NEIL1Q96FI4 390 aaPredicted RBP3.58□□□□□ -1.84
TRAV28-201ENST00000557548 PHACTR3Q96KR7 559 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 PWWP2AQ96N64 755 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 MOGAT1Q96PD6 335 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 TWNKQ96RR1 684 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 TCF25Q9BQ70 676 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 SLC46A2Q9BY10 475 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 AGXT2Q9BYV1 514 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 GPR63Q9BZJ6 419 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 ELAC1Q9H777 363 aaKnown RBP3.58□□□□□ -1.84
TRAV28-201ENST00000557548 ZBTB26Q9HCK0 441 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 HELLSQ9NRZ9 838 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 OLA1Q9NTK5 396 aaKnown RBP3.58□□□□□ -1.84
TRAV28-201ENST00000557548 ETAA1Q9NY74 926 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 FAM30AQ9NZY2 134 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 NTMQ9P121 344 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 DNMT3BQ9UBC3 853 aaKnown RBP3.58□□□□□ -1.84
TRAV28-201ENST00000557548 ASAP1Q9ULH1 1129 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 DAPP1Q9UN19 280 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 SHOC2Q9UQ13 582 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 A0A1W2PRX2 142 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 ANKRD18BA2A2Z9 1011 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 J3KTA2 159 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 MATN2O00339 956 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 RGS10O43665 173 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 CCNT2O60583 730 aaKnown RBP3.57□□□□□ -1.84
TRAV28-201ENST00000557548 TRIM13O60858 407 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 NTSR2O95665 410 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 DDX58O95786 925 aaKnown RBP3.57□□□□□ -1.84
TRAV28-201ENST00000557548 VIPP01282 170 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 ANXA6P08133 673 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 FCER1AP12319 257 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 RRM1P23921 792 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 SLC5A2P31639 672 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 TOB1P50616 345 aaPredicted RBP3.57□□□□□ -1.84
TRAV28-201ENST00000557548 ZNF134P52741 427 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 DCAF7P61962 342 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 VAMP2P63027 116 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 CHRNDQ07001 517 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 SLFN5Q08AF3 891 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 GRM4Q14833 912 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 RPS6KA2Q15349 733 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 CSRP2Q16527 193 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 ZNF750Q32MQ0 723 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 ZNF568Q3ZCX4 644 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 VWA3BQ502W6 1294 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 MAP3K21Q5TCX8 1036 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 MANEALQ5VSG8 457 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 SPATA1Q5VX52 437 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 ABLIM2Q6H8Q1 611 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 NFRKBQ6P4R8 1299 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 LAYNQ6UX15 382 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 SLC30A10Q6XR72 485 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 MED25Q71SY5 747 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 FASTKD5Q7L8L6 764 aaKnown RBP3.57□□□□□ -1.84
TRAV28-201ENST00000557548 NRSN1Q8IZ57 195 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 TMEM57Q8N5G2 664 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 ANKRD52Q8NB46 1076 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 PSD4Q8NDX1 1056 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 NSUN7Q8NE18 718 aaKnown RBP3.57□□□□□ -1.84
TRAV28-201ENST00000557548 SHCBP1Q8NEM2 672 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 ZFP28Q8NHY6 868 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 BPIFB1Q8TDL5 484 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 SNRNP27Q8WVK2 155 aaKnown RBP3.57□□□□□ -1.84
TRAV28-201ENST00000557548 ST8SIA4Q92187 359 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 SMOQ99835 787 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 LSM14BQ9BX40 385 aaKnown RBP3.57□□□□□ -1.84
TRAV28-201ENST00000557548 TWSG1Q9GZX9 223 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 BRD8Q9H0E9 1235 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 VPS16Q9H269 839 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 FAM83DQ9H4H8 585 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 AGO3Q9H9G7 860 aaKnown RBP3.57□□□□□ -1.84
TRAV28-201ENST00000557548 CHODLQ9H9P2 273 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 SPON1Q9HCB6 807 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 PREBQ9HCU5 417 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 TMOD4Q9NZQ9 345 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 SETD1BQ9UPS6 1966 aaKnown RBP3.57□□□□□ -1.84
TRAV28-201ENST00000557548 HDAC5Q9UQL6 1122 aa3.57□□□□□ -1.84
TRAV28-201ENST00000557548 RRP7AQ9Y3A4 280 aaKnown RBP3.57□□□□□ -1.84
TRAV28-201ENST00000557548 A0A1W2PPH5 198 aa3.56□□□□□ -1.84
TRAV28-201ENST00000557548 FSD2A1L4K1 749 aa3.56□□□□□ -1.84
TRAV28-201ENST00000557548 FAM90A18PA6NE21 464 aa3.56□□□□□ -1.84
TRAV28-201ENST00000557548 FAM90A16PA6NEW6 464 aa3.56□□□□□ -1.84
TRAV28-201ENST00000557548 FAM90A9PA6NNJ1 464 aa3.56□□□□□ -1.84
TRAV28-201ENST00000557548 FAM90A5PA8MXJ8 464 aa3.56□□□□□ -1.84
TRAV28-201ENST00000557548 PRR5-ARHGAP8B1AHC4 643 aa3.56□□□□□ -1.84
TRAV28-201ENST00000557548 E7EVH7 732 aa3.56□□□□□ -1.84
TRAV28-201ENST00000557548 CCER2I3L3R5 266 aa3.56□□□□□ -1.84
TRAV28-201ENST00000557548 RTN3O95197 1032 aaPredicted RBP3.56□□□□□ -1.84
TRAV28-201ENST00000557548 LMNAP02545 664 aaKnown RBP3.56□□□□□ -1.84
TRAV28-201ENST00000557548 ATXN1LP0C7T5 689 aaKnown RBP3.56□□□□□ -1.84
TRAV28-201ENST00000557548 FAM90A15PP0C7V4 464 aa3.56□□□□□ -1.84
TRAV28-201ENST00000557548 FAM90A14PP0C7W9 464 aa3.56□□□□□ -1.84
TRAV28-201ENST00000557548 HGFP14210 728 aa3.56□□□□□ -1.84
TRAV28-201ENST00000557548 YY1P25490 414 aa3.56□□□□□ -1.84
TRAV28-201ENST00000557548 PRKAG1P54619 331 aa3.56□□□□□ -1.84
TRAV28-201ENST00000557548 CASP6P55212 293 aa3.56□□□□□ -1.84
TRAV28-201ENST00000557548 DLG4P78352 724 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms