RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 PPP1R26Q5T8A7 1209 aaPredicted RBP11.22□□□□□ -0.61
HNRNPC-232ENST00000557442 GJB7Q6PEY0 223 aa11.22□□□□□ -0.61
HNRNPC-232ENST00000557442 MTSS1LQ765P7 747 aa11.22□□□□□ -0.61
HNRNPC-232ENST00000557442 DHX40Q8IX18 779 aaKnown RBP11.22□□□□□ -0.61
HNRNPC-232ENST00000557442 RBBP8NLQ8NC74 664 aaPredicted RBP11.22□□□□□ -0.61
HNRNPC-232ENST00000557442 ST13P5Q8NFI4 369 aaPredicted RBP11.22□□□□□ -0.61
HNRNPC-232ENST00000557442 KHSRPQ92945 711 aaKnown RBP eCLIP11.22□□□□□ -0.612e-7■■■□□ 17.4
HNRNPC-232ENST00000557442 JAKMIP2Q96AA8 810 aa11.22□□□□□ -0.61
HNRNPC-232ENST00000557442 CEP295NLQ96MC4 621 aa11.22□□□□□ -0.61
HNRNPC-232ENST00000557442 KREMEN1Q96MU8 473 aa11.22□□□□□ -0.61
HNRNPC-232ENST00000557442 KCNK16Q96T55 309 aa11.22□□□□□ -0.61
HNRNPC-232ENST00000557442 HNRNPABQ99729 332 aaKnown RBP11.22□□□□□ -0.61
HNRNPC-232ENST00000557442 IL21Q9HBE4 155 aa11.22□□□□□ -0.61
HNRNPC-232ENST00000557442 GDE1Q9NZC3 331 aa11.22□□□□□ -0.61
HNRNPC-232ENST00000557442 EHD2Q9NZN4 543 aa11.22□□□□□ -0.61
HNRNPC-232ENST00000557442 MYOFQ9NZM1 2061 aa11.22□□□□□ -0.61
HNRNPC-232ENST00000557442 SMTNL1A8MU46 457 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 DCXO43602 365 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 BEST1O76090 585 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 ATP1A3P13637 1013 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 ZNF18P17022 549 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 NPR3P17342 541 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 ACO1P21399 889 aaKnown RBP11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 COPB1P53618 953 aaKnown RBP11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 MFAP3P55082 362 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 USP46P62068 366 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 HTR4Q13639 388 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 PTPN21Q16825 1174 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 ARHGAP44Q17R89 818 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 GOLGA7BQ2TAP0 167 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 SGO2Q562F6 1265 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 FKBP15Q5T1M5 1219 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 GPR158Q5T848 1215 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 CLEC20AQ6ZU45 233 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 ENOSF1Q7L5Y1 443 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 RSAD2Q8WXG1 361 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 FGF14Q92915 247 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 FAM81BQ96LP2 452 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 MYRFLQ96LU7 910 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 SMOQ99835 787 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 KXD1Q9BQD3 176 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 HSD3B7Q9H2F3 369 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 KCNK12Q9HB15 430 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 SIX2Q9NPC8 291 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 IGSF9Q9P2J2 1179 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 LIMA1Q9UHB6 759 aaKnown RBP11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 SORCS3Q9UPU3 1222 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 NUMBLQ9Y6R0 609 aa11.21□□□□□ -0.61
HNRNPC-232ENST00000557442 KMT2EQ8IZD2 1858 aa11.21□□□□□ -0.62
HNRNPC-232ENST00000557442 LGALS16A8MUM7 142 aa11.2□□□□□ -0.62
HNRNPC-232ENST00000557442 ANHXE9PGG2 379 aa11.2□□□□□ -0.62
HNRNPC-232ENST00000557442 TADA3O75528 432 aa11.2□□□□□ -0.62
HNRNPC-232ENST00000557442 RTN3O95197 1032 aaPredicted RBP11.2□□□□□ -0.62
HNRNPC-232ENST00000557442 F11P03951 625 aa11.2□□□□□ -0.62
HNRNPC-232ENST00000557442 PAEPP09466 180 aa11.2□□□□□ -0.62
HNRNPC-232ENST00000557442 SLC5A3P53794 718 aa11.2□□□□□ -0.62
HNRNPC-232ENST00000557442 FAM78AQ5JUQ0 283 aa11.2□□□□□ -0.62
HNRNPC-232ENST00000557442 ARHGAP17Q68EM7 881 aa11.2□□□□□ -0.62
HNRNPC-232ENST00000557442 PARM1Q6UWI2 310 aa11.2□□□□□ -0.62
HNRNPC-232ENST00000557442 TMEM150AQ86TG1 271 aa11.2□□□□□ -0.62
HNRNPC-232ENST00000557442 NUP93Q8N1F7 819 aa11.2□□□□□ -0.62
HNRNPC-232ENST00000557442 ZMIZ2Q8NF64 920 aa11.2□□□□□ -0.62
HNRNPC-232ENST00000557442 ZSCAN18Q8TBC5 510 aaPredicted RBP11.2□□□□□ -0.62
HNRNPC-232ENST00000557442 MRPS31Q92665 395 aaKnown RBP11.2□□□□□ -0.62
HNRNPC-232ENST00000557442 ZSWIM3Q96MP5 696 aa11.2□□□□□ -0.62
HNRNPC-232ENST00000557442 SLITRK1Q96PX8 696 aa11.2□□□□□ -0.62
HNRNPC-232ENST00000557442 TTLL2Q9BWV7 592 aa11.2□□□□□ -0.62
HNRNPC-232ENST00000557442 LSM14BQ9BX40 385 aaKnown RBP11.2□□□□□ -0.62
HNRNPC-232ENST00000557442 DUSP16Q9BY84 665 aa11.2□□□□□ -0.62
HNRNPC-232ENST00000557442 GPR88Q9GZN0 384 aa11.2□□□□□ -0.62
HNRNPC-232ENST00000557442 CSNK1G1Q9HCP0 422 aa11.2□□□□□ -0.62
HNRNPC-232ENST00000557442 TSPAN16Q9UKR8 245 aa11.2□□□□□ -0.62
HNRNPC-232ENST00000557442 RNF225M0QZC1 329 aaPredicted RBP11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 CAVIN2O95810 425 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 CALCAP01258 141 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 VDRP11473 427 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 ALADP13716 330 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 BRD2P25440 801 aaKnown RBP11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 YWHAQP27348 245 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 USP8P40818 1118 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 ZNF132P52740 706 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 BCAT1P54687 386 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 SLC8A3P57103 927 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 TPM4P67936 248 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 KCNMA1Q12791 1236 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 TDGQ13569 410 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 RAPGEF1Q13905 1077 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 IQCB1Q15051 598 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 GPRIN1Q7Z2K8 1008 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 LUZP1Q86V48 1076 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 MAB21L3Q8N8X9 362 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 SCAMP5Q8TAC9 235 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 SMARCD2Q92925 531 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 FBXO32Q969P5 355 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 NXPE3Q969Y0 559 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 ASB16Q96NS5 453 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 SMOC2Q9H3U7 446 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 TASP1Q9H6P5 420 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 CBX8Q9HC52 389 aa11.19□□□□□ -0.62
HNRNPC-232ENST00000557442 ZFP14Q9HCL3 533 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms