RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 EXOC4Q96A65 974 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 FAM122AQ96E09 287 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 NT5C1BQ96P26 610 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 SRRTQ9BXP5 876 aaKnown RBP14.66□□□□□ -0.06
VPS33B-206ENST00000557358 ZNF518BQ9C0D4 1074 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 FBXO44Q9H4M3 255 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 TRPV5Q9NQA5 729 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 KRT82Q9NSB4 513 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 TDP1Q9NUW8 608 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 COMMD8Q9NX08 183 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 SIT1Q9Y3P8 196 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 PTPRDP23468 1912 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 NUP210Q8TEM1 1887 aaPredicted RBP14.65□□□□□ -0.06
VPS33B-206ENST00000557358 DENND4CQ5VZ89 1909 aa14.65□□□□□ -0.06
VPS33B-206ENST00000557358 CLDN5O00501 218 aa14.65□□□□□ -0.06
VPS33B-206ENST00000557358 GLULP15104 373 aa14.65□□□□□ -0.06
VPS33B-206ENST00000557358 FMO5P49326 533 aa14.65□□□□□ -0.06
VPS33B-206ENST00000557358 KPNA1P52294 538 aaPredicted RBP14.65□□□□□ -0.06
VPS33B-206ENST00000557358 STARD6P59095 220 aa14.65□□□□□ -0.06
VPS33B-206ENST00000557358 AMPD2Q01433 879 aa14.65□□□□□ -0.06
VPS33B-206ENST00000557358 IFRD2Q12894 506 aaPredicted RBP14.65□□□□□ -0.06
VPS33B-206ENST00000557358 CCDC142Q17RM4 750 aa14.65□□□□□ -0.06
VPS33B-206ENST00000557358 STXBP5Q5T5C0 1151 aa14.65□□□□□ -0.06
VPS33B-206ENST00000557358 TXNDC8Q6A555 127 aa14.65□□□□□ -0.06
VPS33B-206ENST00000557358 SLC2A14Q8TDB8 520 aa14.65□□□□□ -0.06
VPS33B-206ENST00000557358 FBXO32Q969P5 355 aa14.65□□□□□ -0.06
VPS33B-206ENST00000557358 SLC35C1Q96A29 364 aa14.65□□□□□ -0.06
VPS33B-206ENST00000557358 CYFIP2Q96F07 1278 aa14.65□□□□□ -0.06
VPS33B-206ENST00000557358 HEXIM2Q96MH2 286 aaKnown RBP14.65□□□□□ -0.06
VPS33B-206ENST00000557358 DUSP9Q99956 384 aaKnown RBP14.65□□□□□ -0.06
VPS33B-206ENST00000557358 SLC46A2Q9BY10 475 aa14.65□□□□□ -0.06
VPS33B-206ENST00000557358 PLA2G2FQ9BZM2 168 aa14.65□□□□□ -0.06
VPS33B-206ENST00000557358 SDCBP2Q9H190 292 aa14.65□□□□□ -0.06
VPS33B-206ENST00000557358 APOBEC3GQ9HC16 384 aaKnown RBP14.65□□□□□ -0.06
VPS33B-206ENST00000557358 COQ4Q9Y3A0 265 aa14.65□□□□□ -0.06
VPS33B-206ENST00000557358 ZNF318Q5VUA4 2279 aa14.65□□□□□ -0.06
VPS33B-206ENST00000557358 KANSL1LA0AUZ9 987 aa14.64□□□□□ -0.07
VPS33B-206ENST00000557358 KRBA1A5PL33 1030 aa14.64□□□□□ -0.07
VPS33B-206ENST00000557358 PMM2O15305 246 aa14.64□□□□□ -0.07
VPS33B-206ENST00000557358 CILPO75339 1184 aa14.64□□□□□ -0.07
VPS33B-206ENST00000557358 AFPP02771 609 aaKnown RBP14.64□□□□□ -0.07
VPS33B-206ENST00000557358 HDCP19113 662 aa14.64□□□□□ -0.07
VPS33B-206ENST00000557358 BMP6P22004 513 aa14.64□□□□□ -0.07
VPS33B-206ENST00000557358 MAGEA9P43362 315 aa14.64□□□□□ -0.07
VPS33B-206ENST00000557358 VCPP55072 806 aaKnown RBP14.64□□□□□ -0.07
VPS33B-206ENST00000557358 ZNF268Q14587 947 aaPredicted RBP14.64□□□□□ -0.07
VPS33B-206ENST00000557358 UBXN2BQ14CS0 331 aa14.64□□□□□ -0.07
VPS33B-206ENST00000557358 CBWD6Q4V339 395 aa14.64□□□□□ -0.07
VPS33B-206ENST00000557358 CBWD3Q5JTY5 395 aa14.64□□□□□ -0.07
VPS33B-206ENST00000557358 CBWD5Q5RIA9 395 aa14.64□□□□□ -0.07
VPS33B-206ENST00000557358 TPRG1Q6ZUI0 275 aa14.64□□□□□ -0.07
VPS33B-206ENST00000557358 OVCA2Q8WZ82 227 aa14.64□□□□□ -0.07
VPS33B-206ENST00000557358 SEMA4DQ92854 862 aa14.64□□□□□ -0.07
VPS33B-206ENST00000557358 ELMO3Q96BJ8 720 aa14.64□□□□□ -0.07
VPS33B-206ENST00000557358 HNRNPABQ99729 332 aaKnown RBP14.64□□□□□ -0.07
VPS33B-206ENST00000557358 TTLL2Q9BWV7 592 aa14.64□□□□□ -0.07
VPS33B-206ENST00000557358 NACA2Q9H009 215 aa14.64□□□□□ -0.07
VPS33B-206ENST00000557358 C8orf33Q9H7E9 229 aaPredicted RBP14.64□□□□□ -0.07
VPS33B-206ENST00000557358 CISHQ9NSE2 258 aa14.64□□□□□ -0.07
VPS33B-206ENST00000557358 FAM49BQ9NUQ9 324 aa14.64□□□□□ -0.07
VPS33B-206ENST00000557358 CCDC130P13994 396 aa14.63□□□□□ -0.07
VPS33B-206ENST00000557358 PRKCSHP14314 528 aaPredicted RBP14.63□□□□□ -0.07
VPS33B-206ENST00000557358 ADORA2BP29275 332 aa14.63□□□□□ -0.07
VPS33B-206ENST00000557358 FCHO2Q0JRZ9 810 aa14.63□□□□□ -0.07
VPS33B-206ENST00000557358 TAF10Q12962 218 aa14.63□□□□□ -0.07
VPS33B-206ENST00000557358 ORC1Q13415 861 aa14.63□□□□□ -0.07
VPS33B-206ENST00000557358 CUL2Q13617 745 aa14.63□□□□□ -0.07
VPS33B-206ENST00000557358 ZNF394Q53GI3 561 aa14.63□□□□□ -0.07
VPS33B-206ENST00000557358 CT47A1Q5JQC4 288 aaPredicted RBP14.63□□□□□ -0.07
VPS33B-206ENST00000557358 DDX42Q86XP3 938 aaKnown RBP eCLIP14.63□□□□□ -0.07
VPS33B-206ENST00000557358 GPIHBP1Q8IV16 184 aa14.63□□□□□ -0.07
VPS33B-206ENST00000557358 FUKQ8N0W3 1084 aa14.63□□□□□ -0.07
VPS33B-206ENST00000557358 TTC16Q8NEE8 873 aa14.63□□□□□ -0.07
VPS33B-206ENST00000557358 GPT2Q8TD30 523 aa14.63□□□□□ -0.07
VPS33B-206ENST00000557358 TMEM176AQ96HP8 235 aa14.63□□□□□ -0.07
VPS33B-206ENST00000557358 FAM81BQ96LP2 452 aa14.63□□□□□ -0.07
VPS33B-206ENST00000557358 OSBPL6Q9BZF3 934 aa14.63□□□□□ -0.07
VPS33B-206ENST00000557358 HEBP1Q9NRV9 189 aa14.63□□□□□ -0.07
VPS33B-206ENST00000557358 NME7Q9Y5B8 376 aa14.63□□□□□ -0.07
VPS33B-206ENST00000557358 GREB1Q4ZG55 1949 aa14.62□□□□□ -0.07
VPS33B-206ENST00000557358 GALR2O43603 387 aaPredicted RBP14.62□□□□□ -0.07
VPS33B-206ENST00000557358 NPR3P17342 541 aa14.62□□□□□ -0.07
VPS33B-206ENST00000557358 ERCC5P28715 1186 aaPredicted RBP14.62□□□□□ -0.07
VPS33B-206ENST00000557358 MTIF2P46199 727 aaKnown RBP14.62□□□□□ -0.07
VPS33B-206ENST00000557358 IFNAR2P48551 515 aa14.62□□□□□ -0.07
VPS33B-206ENST00000557358 SLC5A3P53794 718 aa14.62□□□□□ -0.07
VPS33B-206ENST00000557358 MLLT6P55198 1093 aaPredicted RBP14.62□□□□□ -0.07
VPS33B-206ENST00000557358 MARSP56192 900 aaKnown RBP14.62□□□□□ -0.07
VPS33B-206ENST00000557358 MAP3K7CLP57077 242 aa14.62□□□□□ -0.07
VPS33B-206ENST00000557358 KCNH2Q12809 1159 aa14.62□□□□□ -0.07
VPS33B-206ENST00000557358 NR1H3Q13133 447 aa14.62□□□□□ -0.07
VPS33B-206ENST00000557358 PDGFRLQ15198 375 aa14.62□□□□□ -0.07
VPS33B-206ENST00000557358 SKOR2Q2VWA4 1001 aaPredicted RBP14.62□□□□□ -0.07
VPS33B-206ENST00000557358 CWF19L1Q69YN2 538 aaKnown RBP14.62□□□□□ -0.07
VPS33B-206ENST00000557358 TMEM150AQ86TG1 271 aa14.62□□□□□ -0.07
VPS33B-206ENST00000557358 PPM1KQ8N3J5 372 aa14.62□□□□□ -0.07
VPS33B-206ENST00000557358 TMEM105Q8N8V8 129 aa14.62□□□□□ -0.07
VPS33B-206ENST00000557358 C12orf29Q8N999 325 aa14.62□□□□□ -0.07
VPS33B-206ENST00000557358 PJA1Q8NG27 643 aa14.62□□□□□ -0.07
VPS33B-206ENST00000557358 FAM3CQ92520 227 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms