RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.96■□□□□ 0.31
TUBB3-213ENST00000557262 HSCBQ8IWL3 235 aa16.96■□□□□ 0.31
TUBB3-213ENST00000557262 C12orf56Q8IXR9 622 aa16.96■□□□□ 0.31
TUBB3-213ENST00000557262 TTC16Q8NEE8 873 aa16.96■□□□□ 0.31
TUBB3-213ENST00000557262 SH3RF2Q8TEC5 729 aa16.96■□□□□ 0.31
TUBB3-213ENST00000557262 ATP2A3Q93084 1043 aa16.96■□□□□ 0.31
TUBB3-213ENST00000557262 C8orf48Q96LL4 319 aa16.96■□□□□ 0.31
TUBB3-213ENST00000557262 RTKNQ9BST9 563 aa16.96■□□□□ 0.31
TUBB3-213ENST00000557262 TRPM5Q9NZQ8 1165 aa16.96■□□□□ 0.31
TUBB3-213ENST00000557262 CDV3Q9UKY7 258 aaKnown RBP16.96■□□□□ 0.31
TUBB3-213ENST00000557262 CFAP45Q9UL16 551 aa16.96■□□□□ 0.31
TUBB3-213ENST00000557262 OBSL1O75147 1896 aa16.95■□□□□ 0.3
TUBB3-213ENST00000557262 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.95■□□□□ 0.3
TUBB3-213ENST00000557262 STAU1O95793 577 aaKnown RBP16.95■□□□□ 0.3
TUBB3-213ENST00000557262 ATICP31939 592 aa16.95■□□□□ 0.3
TUBB3-213ENST00000557262 PPP3CCP48454 512 aa16.95■□□□□ 0.3
TUBB3-213ENST00000557262 USP46P62068 366 aa16.95■□□□□ 0.3
TUBB3-213ENST00000557262 TNNC1P63316 161 aa16.95■□□□□ 0.3
TUBB3-213ENST00000557262 USP4Q13107 963 aa16.95■□□□□ 0.3
TUBB3-213ENST00000557262 CUL4BQ13620 913 aa16.95■□□□□ 0.3
TUBB3-213ENST00000557262 CSRP2Q16527 193 aa16.95■□□□□ 0.3
TUBB3-213ENST00000557262 EML3Q32P44 896 aa16.95■□□□□ 0.3
TUBB3-213ENST00000557262 MDH1BQ5I0G3 518 aa16.95■□□□□ 0.3
TUBB3-213ENST00000557262 CAMKK1Q8N5S9 505 aa16.95■□□□□ 0.3
TUBB3-213ENST00000557262 FAM160A2Q8N612 972 aaPredicted RBP16.95■□□□□ 0.3
TUBB3-213ENST00000557262 CD101Q93033 1021 aa16.95■□□□□ 0.3
TUBB3-213ENST00000557262 TTLL2Q9BWV7 592 aa16.95■□□□□ 0.3
TUBB3-213ENST00000557262 LINC00597Q9H2U6 94 aa16.95■□□□□ 0.3
TUBB3-213ENST00000557262 SEMA4GQ9NTN9 838 aa16.95■□□□□ 0.3
TUBB3-213ENST00000557262 RCOR1Q9UKL0 485 aa16.95■□□□□ 0.3
TUBB3-213ENST00000557262 ARHGAP26Q9UNA1 814 aa16.95■□□□□ 0.3
TUBB3-213ENST00000557262 NME7Q9Y5B8 376 aa16.95■□□□□ 0.3
TUBB3-213ENST00000557262 WNT6Q9Y6F9 365 aa16.95■□□□□ 0.3
TUBB3-213ENST00000557262 EXOC3O60645 756 aa16.94■□□□□ 0.3
TUBB3-213ENST00000557262 RNF40O75150 1001 aa16.94■□□□□ 0.3
TUBB3-213ENST00000557262 PHACTR2O75167 634 aa16.94■□□□□ 0.3
TUBB3-213ENST00000557262 PXNP49023 591 aaPredicted RBP16.94■□□□□ 0.3
TUBB3-213ENST00000557262 MYL6P60660 151 aa16.94■□□□□ 0.3
TUBB3-213ENST00000557262 NOP14P78316 857 aaKnown RBP16.94■□□□□ 0.3
TUBB3-213ENST00000557262 CEP57L1Q8IYX8 460 aa16.94■□□□□ 0.3
TUBB3-213ENST00000557262 SYAP1Q96A49 352 aaPredicted RBP16.94■□□□□ 0.3
TUBB3-213ENST00000557262 GZF1Q9H116 711 aaPredicted RBP16.94■□□□□ 0.3
TUBB3-213ENST00000557262 NXF1Q9UBU9 619 aaKnown RBP16.94■□□□□ 0.3
TUBB3-213ENST00000557262 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.94■□□□□ 0.3
TUBB3-213ENST00000557262 ZNF840PA6NDX5 716 aa16.93■□□□□ 0.3
TUBB3-213ENST00000557262 A8MXQ7 604 aa16.93■□□□□ 0.3
TUBB3-213ENST00000557262 F8VP50 259 aa16.93■□□□□ 0.3
TUBB3-213ENST00000557262 FOXD2O60548 495 aaPredicted RBP16.93■□□□□ 0.3
TUBB3-213ENST00000557262 SLFN14P0C7P3 912 aa16.93■□□□□ 0.3
TUBB3-213ENST00000557262 AP3M2P53677 418 aa16.93■□□□□ 0.3
TUBB3-213ENST00000557262 TDRD10Q5VZ19 366 aaKnown RBP16.93■□□□□ 0.3
TUBB3-213ENST00000557262 NAIF1Q69YI7 327 aaPredicted RBP16.93■□□□□ 0.3
TUBB3-213ENST00000557262 GOLGA5Q8TBA6 731 aa16.93■□□□□ 0.3
TUBB3-213ENST00000557262 GAB3Q8WWW8 586 aa16.93■□□□□ 0.3
TUBB3-213ENST00000557262 XYLT2Q9H1B5 865 aa16.93■□□□□ 0.3
TUBB3-213ENST00000557262 SERTAD1Q9UHV2 236 aa16.93■□□□□ 0.3
TUBB3-213ENST00000557262 DCDC2BA2VCK2 349 aa16.92■□□□□ 0.3
TUBB3-213ENST00000557262 LEFTY2O00292 366 aa16.92■□□□□ 0.3
TUBB3-213ENST00000557262 RPP40O75818 363 aaKnown RBP16.92■□□□□ 0.3
TUBB3-213ENST00000557262 NFATC1O95644 943 aa16.92■□□□□ 0.3
TUBB3-213ENST00000557262 SLC7A9P82251 487 aa16.92■□□□□ 0.3
TUBB3-213ENST00000557262 ZXDBP98169 803 aa16.92■□□□□ 0.3
TUBB3-213ENST00000557262 DNM1Q05193 864 aaKnown RBP16.92■□□□□ 0.3
TUBB3-213ENST00000557262 PSMD2Q13200 908 aa16.92■□□□□ 0.3
TUBB3-213ENST00000557262 PRR23CQ6ZRP0 262 aa16.92■□□□□ 0.3
TUBB3-213ENST00000557262 CACNA2D4Q7Z3S7 1137 aa16.92■□□□□ 0.3
TUBB3-213ENST00000557262 GRAMD1CQ8IYS0 662 aa16.92■□□□□ 0.3
TUBB3-213ENST00000557262 KIAA1958Q8N8K9 716 aa16.92■□□□□ 0.3
TUBB3-213ENST00000557262 B3GALNT2Q8NCR0 500 aa16.92■□□□□ 0.3
TUBB3-213ENST00000557262 CCDC26Q8TAB7 109 aa16.92■□□□□ 0.3
TUBB3-213ENST00000557262 PLEKHO2Q8TD55 490 aa16.92■□□□□ 0.3
TUBB3-213ENST00000557262 NETO1Q8TDF5 533 aa16.92■□□□□ 0.3
TUBB3-213ENST00000557262 PARD3BQ8TEW8 1205 aa16.92■□□□□ 0.3
TUBB3-213ENST00000557262 LOXL4Q96JB6 756 aa16.92■□□□□ 0.3
TUBB3-213ENST00000557262 B3GNT5Q9BYG0 378 aa16.92■□□□□ 0.3
TUBB3-213ENST00000557262 ELOVL4Q9GZR5 314 aa16.92■□□□□ 0.3
TUBB3-213ENST00000557262 RNF38Q9H0F5 515 aa16.92■□□□□ 0.3
TUBB3-213ENST00000557262 DPEP3Q9H4B8 488 aa16.92■□□□□ 0.3
TUBB3-213ENST00000557262 VRTNQ9H8Y1 702 aa16.92■□□□□ 0.3
TUBB3-213ENST00000557262 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.91■□□□□ 0.3
TUBB3-213ENST00000557262 AXIN1O15169 862 aa16.91■□□□□ 0.3
TUBB3-213ENST00000557262 KLRC4O43908 158 aa16.91■□□□□ 0.3
TUBB3-213ENST00000557262 AKAP3O75969 853 aa16.91■□□□□ 0.3
TUBB3-213ENST00000557262 ABL1P00519 1130 aa16.91■□□□□ 0.3
TUBB3-213ENST00000557262 C4BPAP04003 597 aaKnown RBP16.91■□□□□ 0.3
TUBB3-213ENST00000557262 CCDC192P0DO97 292 aa16.91■□□□□ 0.3
TUBB3-213ENST00000557262 CASP4P49662 377 aa16.91■□□□□ 0.3
TUBB3-213ENST00000557262 CLDN10P78369 228 aa16.91■□□□□ 0.3
TUBB3-213ENST00000557262 TAF10Q12962 218 aa16.91■□□□□ 0.3
TUBB3-213ENST00000557262 STK4Q13043 487 aa16.91■□□□□ 0.3
TUBB3-213ENST00000557262 BIRC3Q13489 604 aa16.91■□□□□ 0.3
TUBB3-213ENST00000557262 SYT13Q7L8C5 426 aa16.91■□□□□ 0.3
TUBB3-213ENST00000557262 ADGRG2Q8IZP9 1017 aa16.91■□□□□ 0.3
TUBB3-213ENST00000557262 NUP93Q8N1F7 819 aa16.91■□□□□ 0.3
TUBB3-213ENST00000557262 RPLP0P6Q8NHW5 317 aa16.91■□□□□ 0.3
TUBB3-213ENST00000557262 EZH1Q92800 747 aaPredicted RBP16.91■□□□□ 0.3
TUBB3-213ENST00000557262 PAGE5Q96GU1 130 aa16.91■□□□□ 0.3
TUBB3-213ENST00000557262 SLITRK1Q96PX8 696 aa16.91■□□□□ 0.3
TUBB3-213ENST00000557262 ZNF518BQ9C0D4 1074 aa16.91■□□□□ 0.3
TUBB3-213ENST00000557262 POLR3BQ9NW08 1133 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms