RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 MTO1Q9Y2Z2 717 aaKnown RBP11.92□□□□□ -0.5
SRP54-213ENST00000556994 IKBKGQ9Y6K9 419 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 E7ESA3 106 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 HNRNPCL1O60812 293 aaKnown RBP11.91□□□□□ -0.5
SRP54-213ENST00000556994 STAM2O75886 525 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 KITP10721 976 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 GNAT1P11488 350 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 KRT3P12035 628 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 PTPN7P35236 360 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 GCLCP48506 637 aaPredicted RBP11.91□□□□□ -0.5
SRP54-213ENST00000556994 RTP1P59025 263 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 EIF3EP60228 445 aaKnown RBP11.91□□□□□ -0.5
SRP54-213ENST00000556994 SLC34A1Q06495 639 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 ENPEPQ07075 957 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 MTMR2Q13614 643 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 DPYSL3Q14195 570 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 NBPF20Q3BBV1 942 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 ZC3H12AQ5D1E8 599 aaKnown RBP11.91□□□□□ -0.5
SRP54-213ENST00000556994 CIAPIN1Q6FI81 312 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 CCDC62Q6P9F0 684 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 ABHD15Q6UXT9 468 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 TMEM130Q8N3G9 435 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 KCTD6Q8NC69 237 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 RDM1Q8NG50 284 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 STMN2Q93045 179 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 OXNAD1Q96HP4 312 aaPredicted RBP11.91□□□□□ -0.5
SRP54-213ENST00000556994 CYTH2Q99418 400 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 TCHPQ9BT92 498 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 CALN1Q9BXU9 219 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 RPAP3Q9H6T3 665 aaPredicted RBP11.91□□□□□ -0.5
SRP54-213ENST00000556994 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.91□□□□□ -0.5
SRP54-213ENST00000556994 CYTH4Q9UIA0 394 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 RPL26L1Q9UNX3 145 aaKnown RBP11.91□□□□□ -0.5
SRP54-213ENST00000556994 A0A0B4J269 797 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 CCDC195A0A1B0GUA6 201 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 ENO1P06733 434 aaKnown RBP11.91□□□□□ -0.5
SRP54-213ENST00000556994 INHBAP08476 426 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 DHRS4L1P0CG22 281 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 RBP3P10745 1247 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 PGM1P36871 562 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 NEK3P51956 506 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 TGFB2P61812 414 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 SP2Q02086 613 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 MMRN1Q13201 1228 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 PTPN20Q4JDL3 420 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 CMPK2Q5EBM0 449 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 STYK1Q6J9G0 422 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 UBR7Q8N806 425 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 LRRN4Q8WUT4 740 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 ALKBH8Q96BT7 664 aaKnown RBP11.91□□□□□ -0.5
SRP54-213ENST00000556994 GPRASP2Q96D09 838 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 CFAP36Q96G28 342 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 CLPTM1LQ96KA5 538 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 FAM161BQ96MY7 647 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 SYNCQ9H7C4 482 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 MARCOQ9UEW3 520 aaPredicted RBP11.91□□□□□ -0.5
SRP54-213ENST00000556994 FETUBQ9UGM5 382 aa11.91□□□□□ -0.5
SRP54-213ENST00000556994 ARID2Q68CP9 1835 aa11.9□□□□□ -0.5
SRP54-213ENST00000556994 IQANK1A0A1B0GTG1 560 aa11.9□□□□□ -0.5
SRP54-213ENST00000556994 B2RBV5 119 aa11.9□□□□□ -0.5
SRP54-213ENST00000556994 H3BRJ5 948 aa11.9□□□□□ -0.5
SRP54-213ENST00000556994 LDHAP00338 332 aaKnown RBP11.9□□□□□ -0.5
SRP54-213ENST00000556994 ASS1P00966 412 aaKnown RBP11.9□□□□□ -0.5
SRP54-213ENST00000556994 RARBP10826 455 aa11.9□□□□□ -0.5
SRP54-213ENST00000556994 CD19P15391 556 aa11.9□□□□□ -0.5
SRP54-213ENST00000556994 ZNF200P98182 395 aaPredicted RBP11.9□□□□□ -0.5
SRP54-213ENST00000556994 XKR3Q5GH77 459 aa11.9□□□□□ -0.5
SRP54-213ENST00000556994 SLFN12LQ6IEE8 588 aa11.9□□□□□ -0.5
SRP54-213ENST00000556994 SH2D5Q6ZV89 423 aa11.9□□□□□ -0.5
SRP54-213ENST00000556994 BBS12Q6ZW61 710 aa11.9□□□□□ -0.5
SRP54-213ENST00000556994 TREML1Q86YW5 311 aa11.9□□□□□ -0.5
SRP54-213ENST00000556994 CTAGE3PQ8IX95 158 aa11.9□□□□□ -0.5
SRP54-213ENST00000556994 KBTBD2Q8IY47 623 aa11.9□□□□□ -0.5
SRP54-213ENST00000556994 APOPT1Q96IL0 206 aa11.9□□□□□ -0.5
SRP54-213ENST00000556994 TUBB6Q9BUF5 446 aa11.9□□□□□ -0.5
SRP54-213ENST00000556994 SLC13A1Q9BZW2 595 aa11.9□□□□□ -0.5
SRP54-213ENST00000556994 ARHGEF4Q9NR80 690 aa11.9□□□□□ -0.5
SRP54-213ENST00000556994 MAP3K20Q9NYL2 800 aaKnown RBP11.9□□□□□ -0.5
SRP54-213ENST00000556994 C2CD2Q9Y426 696 aa11.9□□□□□ -0.5
SRP54-213ENST00000556994 RGPD3A6NKT7 1758 aaPredicted RBP11.9□□□□□ -0.51
SRP54-213ENST00000556994 RGPD4Q7Z3J3 1758 aa11.9□□□□□ -0.51
SRP54-213ENST00000556994 H0YCG3 227 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 VWA5AO00534 786 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 CYB561D2O14569 222 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 DNAJC6O75061 913 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 MAP3K6O95382 1288 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 RAP1GAPP47736 663 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 SERPINB4P48594 390 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 KDSRQ06136 332 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 LBRQ14739 615 aaKnown RBP11.89□□□□□ -0.51
SRP54-213ENST00000556994 HSF5Q4G112 596 aaPredicted RBP11.89□□□□□ -0.51
SRP54-213ENST00000556994 RAB6CQ53S08 254 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 CES4AQ5XG92 561 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 IRGCQ6NXR0 463 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 PPP1R2P3Q6NXS1 205 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 NIPA2Q8N8Q9 360 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 SPATA18Q8TC71 538 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 LPAR1Q92633 364 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 SRPK1Q96SB4 655 aaKnown RBP11.89□□□□□ -0.51
SRP54-213ENST00000556994 GMLQ99445 158 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms