RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 DMWDQ09019 674 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 SRSF5Q13243 272 aaKnown RBP11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 NCOA4Q13772 614 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 CCINQ13939 588 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 WDR44Q5JSH3 913 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 MAMSTRQ6ZN01 415 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 LIMS2Q7Z4I7 341 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 LONP2Q86WA8 852 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 GPR161Q8N6U8 529 aaKnown RBP11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 B3GALNT2Q8NCR0 500 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 RIN3Q8TB24 985 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 PARD3BQ8TEW8 1205 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 OSCP1Q8WVF1 389 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 NELL1Q92832 810 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 ATP2A3Q93084 1043 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 RMDN1Q96DB5 314 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 CHFRQ96EP1 664 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 TNIP3Q96KP6 325 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 SLITRK1Q96PX8 696 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 P2RY13Q9BPV8 354 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 ZNF518BQ9C0D4 1074 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 ELOVL4Q9GZR5 314 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 SMYD3Q9H7B4 428 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 MMRN2Q9H8L6 949 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 ECT2Q9H8V3 914 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.26□□□□□ -0.611e-8■■■■■ 75.7
SPTLC2-205ENST00000556607 SLC8A2Q9UPR5 921 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 MAPK8IP1Q9UQF2 711 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 ATP8B3O60423 1300 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 RALGAPA1Q6GYQ0 2036 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 OTOL1A6NHN0 477 aaPredicted RBP11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 PDXKO00764 312 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 TRDMT1O14717 391 aaKnown RBP11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 RNF40O75150 1001 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 STAU1O95793 577 aaKnown RBP11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 EGFP01133 1207 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 C4BPAP04003 597 aaKnown RBP11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 MYL1P05976 194 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 PRR29P0C7W0 189 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 MBL2P11226 248 aaPredicted RBP11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 TDGF1P13385 188 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 TRIM21P19474 475 aaKnown RBP11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 GJA4P35212 333 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 PIK3CAP42336 1068 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 PPP3CCP48454 512 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 PXNP49023 591 aaPredicted RBP11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 SPEM2Q0P670 501 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 TAF10Q12962 218 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 ZNF77Q15935 545 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 SGSM1Q2NKQ1 1148 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 TMEM196Q5HYL7 178 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 FSTL4Q6MZW2 842 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 DGLUCYQ7Z3D6 616 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 NUP93Q8N1F7 819 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 PLEKHO2Q8TD55 490 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 CD101Q93033 1021 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 FBXO32Q969P5 355 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 CCDC34Q96HJ3 373 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 C8orf48Q96LL4 319 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 CEP295NLQ96MC4 621 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 B3GNT5Q9BYG0 378 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 SCAND2PQ9GZW5 306 aaPredicted RBP11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 LINC00597Q9H2U6 94 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 KCTD10Q9H3F6 313 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 C2orf42Q9NWW7 574 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 SMPD4Q9NXE4 827 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 NME7Q9Y5B8 376 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 MYO16Q9Y6X6 1858 aa11.25□□□□□ -0.61
SPTLC2-205ENST00000556607 K7ESF4 209 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 LEFTY2O00292 366 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 HRO43593 1189 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 NFATC1O95644 943 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 CCDC192P0DO97 292 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 KRT13P13646 458 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 DRD1P21728 446 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 YWHAQP27348 245 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 CNR2P34972 360 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 VAMP7P51809 220 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 CACNA2D1P54289 1103 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 NOP14P78316 857 aaKnown RBP11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 FOXK2Q01167 660 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 USP4Q13107 963 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 RSPO4Q2I0M5 234 aaPredicted RBP11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 LAIR1Q6GTX8 287 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 PKN3Q6P5Z2 889 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 ERMP1Q7Z2K6 904 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 ACOT1Q86TX2 421 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 SLC9A9Q8IVB4 645 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 RPLP0P6Q8NHW5 317 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 KCNK16Q96T55 309 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 IMPG2Q9BZV3 1241 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 NACA2Q9H009 215 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 GZF1Q9H116 711 aaPredicted RBP11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 XYLT2Q9H1B5 865 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 GDPD2Q9HCC8 539 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 DMAC2Q9NW81 257 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 GCNT4Q9P109 453 aa11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 CHORDC1Q9UHD1 332 aaPredicted RBP11.24□□□□□ -0.61
SPTLC2-205ENST00000556607 ARHGAP26Q9UNA1 814 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms