RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 SH2B3Q9UQQ2 575 aa5.58□□□□□ -1.52
SCFD1-221ENST00000556534 ENTPD2Q9Y5L3 495 aa5.58□□□□□ -1.52
SCFD1-221ENST00000556534 POLR2AP24928 1970 aaKnown RBP5.57□□□□□ -1.52
SCFD1-221ENST00000556534 ORC4O43929 436 aa5.57□□□□□ -1.52
SCFD1-221ENST00000556534 SRGAP2O75044 1071 aa5.57□□□□□ -1.52
SCFD1-221ENST00000556534 IL18RAPO95256 599 aa5.57□□□□□ -1.52
SCFD1-221ENST00000556534 BMP5P22003 454 aa5.57□□□□□ -1.52
SCFD1-221ENST00000556534 ITPKBP27987 946 aa5.57□□□□□ -1.52
SCFD1-221ENST00000556534 TM4SF4P48230 202 aa5.57□□□□□ -1.52
SCFD1-221ENST00000556534 PTDSS1P48651 473 aaKnown RBP5.57□□□□□ -1.52
SCFD1-221ENST00000556534 ARHGEF7Q14155 803 aa5.57□□□□□ -1.52
SCFD1-221ENST00000556534 TREML2Q5T2D2 321 aa5.57□□□□□ -1.52
SCFD1-221ENST00000556534 CERCAMQ5T4B2 595 aa5.57□□□□□ -1.52
SCFD1-221ENST00000556534 CACHD1Q5VU97 1274 aa5.57□□□□□ -1.52
SCFD1-221ENST00000556534 ZNF551Q7Z340 670 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-221ENST00000556534 LIX1LQ8IVB5 337 aa5.57□□□□□ -1.52
SCFD1-221ENST00000556534 YAF2Q8IY57 180 aa5.57□□□□□ -1.52
SCFD1-221ENST00000556534 RNF152Q8N8N0 203 aa5.57□□□□□ -1.52
SCFD1-221ENST00000556534 FAM98AQ8NCA5 519 aaKnown RBP5.57□□□□□ -1.52
SCFD1-221ENST00000556534 DNAJB14Q8TBM8 379 aa5.57□□□□□ -1.52
SCFD1-221ENST00000556534 CAGE1Q8TC20 777 aa5.57□□□□□ -1.52
SCFD1-221ENST00000556534 OSCP1Q8WVF1 389 aa5.57□□□□□ -1.52
SCFD1-221ENST00000556534 SOCS4Q8WXH5 440 aa5.57□□□□□ -1.52
SCFD1-221ENST00000556534 ZC3H10Q96K80 434 aaKnown RBP5.57□□□□□ -1.52
SCFD1-221ENST00000556534 A1L4Q6 167 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 POM121BA6NF01 834 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 ZAR1LA6NP61 321 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 CD3EAPO15446 510 aaKnown RBP5.56□□□□□ -1.52
SCFD1-221ENST00000556534 C1QL1O75973 258 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 TTLL1O95922 423 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 FESP07332 822 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 ANXA2P07355 339 aaKnown RBP5.56□□□□□ -1.52
SCFD1-221ENST00000556534 MYL3P08590 195 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 PARP1P09874 1014 aaKnown RBP5.56□□□□□ -1.52
SCFD1-221ENST00000556534 EBLN1P0CF75 366 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 PTH2RP49190 550 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 SLC29A2Q14542 456 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 GRASPQ7Z6J2 395 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-221ENST00000556534 PRIMA1Q86XR5 153 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 PPP2R3CQ969Q6 453 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 R3HDM4Q96D70 268 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 UROC1Q96N76 676 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 TBCBQ99426 244 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 PCGF6Q9BYE7 350 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 TRIM5Q9C035 493 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 KLK15Q9H2R5 256 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 R3HDMLQ9H3Y0 253 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 GBA2Q9HCG7 927 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-221ENST00000556534 ARHGEF3Q9NR81 526 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 IL17RBQ9NRM6 502 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 SERTAD4Q9NUC0 356 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 SLC17A6Q9P2U8 582 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 ZNF212Q9UDV6 495 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 ZNHIT2Q9UHR6 403 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 ITGB1BP2Q9UKP3 347 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 INSL6Q9Y581 213 aa5.56□□□□□ -1.52
SCFD1-221ENST00000556534 H0YIZ8 118 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 GCOM1H8Y6P7 765 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-221ENST00000556534 RAB27BO00194 218 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 VNN1O95497 513 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 ONECUT2O95948 504 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 NUDT3O95989 172 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 DRD4P21917 467 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 IL1R2P27930 398 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 CPT1AP50416 773 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 BCAT1P54687 386 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 IFIT5Q13325 482 aaKnown RBP5.55□□□□□ -1.52
SCFD1-221ENST00000556534 SMN1Q16637 294 aaKnown RBP5.55□□□□□ -1.52
SCFD1-221ENST00000556534 LY6KQ17RY6 165 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 ZNF750Q32MQ0 723 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 PLAC9Q5JTB6 97 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 KLHDC7AQ5VTJ3 777 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 SLC9A4Q6AI14 798 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 IZUMO1Q8IYV9 350 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 SPARTQ8N0X7 666 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 IQCDQ96DY2 449 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 TIMP4Q99727 224 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 SEMA4GQ9NTN9 838 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 TRMT13Q9NUP7 481 aaKnown RBP5.55□□□□□ -1.52
SCFD1-221ENST00000556534 ASB6Q9NWX5 421 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 DLL3Q9NYJ7 618 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 DKK4Q9UBT3 224 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 CAPN11Q9UMQ6 739 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 GABRQQ9UN88 632 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 ST3GAL5Q9UNP4 418 aa5.55□□□□□ -1.52
SCFD1-221ENST00000556534 A0A087WZ62 844 aa5.54□□□□□ -1.52
SCFD1-221ENST00000556534 A0A1W2PPC4 97 aa5.54□□□□□ -1.52
SCFD1-221ENST00000556534 PIAS2O75928 621 aa5.54□□□□□ -1.52
SCFD1-221ENST00000556534 RASAL1O95294 804 aa5.54□□□□□ -1.52
SCFD1-221ENST00000556534 A1BGP04217 495 aa5.54□□□□□ -1.52
SCFD1-221ENST00000556534 NBPF7P0C2Y1 421 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-221ENST00000556534 WT1P19544 449 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-221ENST00000556534 BTF3P20290 206 aaKnown RBP5.54□□□□□ -1.52
SCFD1-221ENST00000556534 ITGA8P53708 1063 aa5.54□□□□□ -1.52
SCFD1-221ENST00000556534 TIAL1Q01085 375 aaKnown RBP eCLIP5.54□□□□□ -1.52
SCFD1-221ENST00000556534 CCNIQ14094 377 aa5.54□□□□□ -1.52
SCFD1-221ENST00000556534 LONRF1Q17RB8 773 aa5.54□□□□□ -1.52
SCFD1-221ENST00000556534 MAP9Q49MG5 647 aa5.54□□□□□ -1.52
SCFD1-221ENST00000556534 TSTD2Q5T7W7 516 aa5.54□□□□□ -1.52
SCFD1-221ENST00000556534 PLAG1Q6DJT9 500 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms