RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 MPP1Q00013 466 aa5.73□□□□□ -1.49
SRP54-211ENST00000556445 CHRNDQ07001 517 aa5.73□□□□□ -1.49
SRP54-211ENST00000556445 FAPQ12884 760 aa5.73□□□□□ -1.49
SRP54-211ENST00000556445 TRDNQ13061 729 aa5.73□□□□□ -1.49
SRP54-211ENST00000556445 RIN1Q13671 783 aa5.73□□□□□ -1.49
SRP54-211ENST00000556445 SEPT2Q15019 361 aa5.73□□□□□ -1.49
SRP54-211ENST00000556445 ACAP1Q15027 740 aa5.73□□□□□ -1.49
SRP54-211ENST00000556445 ALX1Q15699 326 aa5.73□□□□□ -1.49
SRP54-211ENST00000556445 ADCK5Q3MIX3 580 aa5.73□□□□□ -1.49
SRP54-211ENST00000556445 TBC1D9BQ66K14 1250 aa5.73□□□□□ -1.49
SRP54-211ENST00000556445 TIGD7Q6NT04 549 aaPredicted RBP5.73□□□□□ -1.49
SRP54-211ENST00000556445 CLEC14AQ86T13 490 aa5.73□□□□□ -1.49
SRP54-211ENST00000556445 TBC1D1Q86TI0 1168 aaPredicted RBP5.73□□□□□ -1.49
SRP54-211ENST00000556445 FBXL16Q8N461 479 aa5.73□□□□□ -1.49
SRP54-211ENST00000556445 ZGPATQ8N5A5 531 aaKnown RBP5.73□□□□□ -1.49
SRP54-211ENST00000556445 DEPTORQ8TB45 409 aa5.73□□□□□ -1.49
SRP54-211ENST00000556445 RABGGTAQ92696 567 aa5.73□□□□□ -1.49
SRP54-211ENST00000556445 RPGRQ92834 1020 aaKnown RBP5.73□□□□□ -1.49
SRP54-211ENST00000556445 SLC7A6OSQ96CW6 309 aaPredicted RBP5.73□□□□□ -1.49
SRP54-211ENST00000556445 LLPHQ9BRT6 129 aaKnown RBP5.73□□□□□ -1.49
SRP54-211ENST00000556445 SEZ6LQ9BYH1 1024 aa5.73□□□□□ -1.49
SRP54-211ENST00000556445 SLC6A15Q9H2J7 730 aa5.73□□□□□ -1.49
SRP54-211ENST00000556445 VTA1Q9NP79 307 aa5.73□□□□□ -1.49
SRP54-211ENST00000556445 TBC1D22BQ9NU19 505 aa5.73□□□□□ -1.49
SRP54-211ENST00000556445 SPTLC3Q9NUV7 552 aa5.73□□□□□ -1.49
SRP54-211ENST00000556445 PLA2G3Q9NZ20 509 aa5.73□□□□□ -1.49
SRP54-211ENST00000556445 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.73□□□□□ -1.49
SRP54-211ENST00000556445 DNAI1Q9UI46 699 aa5.73□□□□□ -1.49
SRP54-211ENST00000556445 NAP1L2Q9ULW6 460 aaPredicted RBP5.73□□□□□ -1.49
SRP54-211ENST00000556445 TMX2Q9Y320 296 aa5.73□□□□□ -1.49
SRP54-211ENST00000556445 MAST3O60307 1309 aa5.73□□□□□ -1.49
SRP54-211ENST00000556445 PDS5AQ29RF7 1337 aaKnown RBP5.73□□□□□ -1.49
SRP54-211ENST00000556445 FAM170AA1A519 330 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 ZNF213O14771 459 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 NCAM2O15394 837 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 GPAA1O43292 621 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 OPHN1O60890 802 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 IDH1O75874 414 aaKnown RBP5.72□□□□□ -1.49
SRP54-211ENST00000556445 IL33O95760 270 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 CYP21A2P08686 494 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 GLULP15104 373 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 MSX2P35548 267 aaPredicted RBP5.72□□□□□ -1.49
SRP54-211ENST00000556445 PHKA1P46020 1223 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 LSSP48449 732 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 NT5C2P49902 561 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 HMGN5P82970 282 aaKnown RBP5.72□□□□□ -1.49
SRP54-211ENST00000556445 BTKQ06187 659 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 PRKD1Q15139 912 aaPredicted RBP5.72□□□□□ -1.49
SRP54-211ENST00000556445 KLHL40Q2TBA0 621 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 PRR16Q569H4 304 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 RRP12Q5JTH9 1297 aaKnown RBP5.72□□□□□ -1.49
SRP54-211ENST00000556445 SLC9C2Q5TAH2 1124 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 AGAP9Q5VTM2 703 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 RETSATQ6NUM9 610 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 NDUFAF2Q8N183 169 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 ZNF808Q8N4W9 903 aaPredicted RBP5.72□□□□□ -1.49
SRP54-211ENST00000556445 CNBD1Q8NA66 436 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 NCOA7Q8NI08 942 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 NSUN6Q8TEA1 469 aaKnown RBP5.72□□□□□ -1.49
SRP54-211ENST00000556445 SYAP1Q96A49 352 aaPredicted RBP5.72□□□□□ -1.49
SRP54-211ENST00000556445 TBC1D20Q96BZ9 403 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 ZBTB10Q96DT7 871 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 CDHR1Q96JP9 859 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 WDR92Q96MX6 357 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 GPHA2Q96T91 129 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 AGXT2Q9BYV1 514 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 NACAP1Q9BZK3 213 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 MYLK2Q9H1R3 596 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 MS4A5Q9H3V2 200 aa5.72□□□□□ -1.49
SRP54-211ENST00000556445 DOCK2Q92608 1830 aa5.71□□□□□ -1.49
SRP54-211ENST00000556445 A0A0A6YYK5 440 aaPredicted RBP5.71□□□□□ -1.5
SRP54-211ENST00000556445 LCHNA4D1U4 455 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 E7EWF7 191 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 PLSCR1O15162 318 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 STX6O43752 255 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 PCDHGA12O60330 932 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 BAIAP3O94812 1187 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 APOL3O95236 402 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 CFBP00751 764 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 CD4P01730 458 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 PYGLP06737 847 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 HNRNPLP14866 589 aaKnown RBP eCLIP5.71□□□□□ -1.5
SRP54-211ENST00000556445 GJB2P29033 226 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 ATICP31939 592 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 MCM5P33992 734 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 RAD52P43351 418 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 PHC1P78364 1004 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 ZXDAP98168 799 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 ROR1Q01973 937 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 PPFIA1Q13136 1202 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 KIF22Q14807 665 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 GRM7Q14831 915 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 TERF2Q15554 542 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 ZBTB41Q5SVQ8 909 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 IFIT1BQ5T764 474 aaKnown RBP5.71□□□□□ -1.5
SRP54-211ENST00000556445 SPATA1Q5VX52 437 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 FAAH2Q6GMR7 532 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 CYP26C1Q6V0L0 522 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 CCDC129Q6ZRS4 1044 aa5.71□□□□□ -1.5
SRP54-211ENST00000556445 GALNT5Q7Z7M9 940 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms