RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 CYP2C18P33260 490 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 PTGS2P35354 604 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 CCL23P55773 120 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 ALX1Q15699 326 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 ELAVL1Q15717 326 aaKnown RBP4.5□□□□□ -1.69
ATXN3-240ENST00000556339 FSCN1Q16658 493 aaKnown RBP4.5□□□□□ -1.69
ATXN3-240ENST00000556339 KRTAP15-1Q3LI76 137 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 GLIPR1L2Q4G1C9 344 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 CCDC178Q5BJE1 867 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 MUM1L1Q5H9M0 696 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 KRT40Q6A162 431 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 MFSD5Q6N075 450 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 DPY19L2P1Q6NXN4 242 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 CXCL17Q6UXB2 119 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 ZNF365Q70YC5 407 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 ANKRD33Q7Z3H0 272 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 TLK2Q86UE8 772 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 NOSTRINQ8IVI9 506 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 RABGGTAQ92696 567 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 TIFAQ96CG3 184 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 SLC7A6OSQ96CW6 309 aaPredicted RBP4.5□□□□□ -1.69
ATXN3-240ENST00000556339 GUCD1Q96NT3 240 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 AGAP2Q99490 1192 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 WDR11Q9BZH6 1224 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 FTOQ9C0B1 505 aaKnown RBP eCLIP4.5□□□□□ -1.69
ATXN3-240ENST00000556339 UBA5Q9GZZ9 404 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 RNF41Q9H4P4 317 aaPredicted RBP4.5□□□□□ -1.69
ATXN3-240ENST00000556339 AGO3Q9H9G7 860 aaKnown RBP4.5□□□□□ -1.69
ATXN3-240ENST00000556339 VTA1Q9NP79 307 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 A1CFQ9NQ94 594 aaKnown RBP4.5□□□□□ -1.69
ATXN3-240ENST00000556339 PDGFCQ9NRA1 345 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 DIAPH3Q9NSV4 1193 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 SAE1Q9UBE0 346 aaPredicted RBP4.5□□□□□ -1.69
ATXN3-240ENST00000556339 PNMA2Q9UL42 364 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 RBM8AQ9Y5S9 174 aaKnown RBP4.5□□□□□ -1.69
ATXN3-240ENST00000556339 FRMPD3Q5JV73 1810 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 MYH7BA7E2Y1 1941 aa4.5□□□□□ -1.69
ATXN3-240ENST00000556339 RAD50Q92878 1312 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-240ENST00000556339 GRXCR1A8MXD5 290 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 KIF28PB7ZC32 967 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 HIP1O00291 1037 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 RRP9O43818 475 aaKnown RBP4.49□□□□□ -1.69
ATXN3-240ENST00000556339 ORC4O43929 436 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 LETM1O95202 739 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-240ENST00000556339 PEX11BO96011 259 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 ICAM1P05362 532 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 SUPT20HL2P0C7V6 817 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 HSPD1P10809 573 aaKnown RBP4.49□□□□□ -1.69
ATXN3-240ENST00000556339 ACTN1P12814 892 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 CSF2RAP15509 400 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 ITGB8P26012 769 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 CPT1AP50416 773 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 CDK7P50613 346 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 PDE1AP54750 535 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 BPIFB4P59827 614 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 PSMC6P62333 389 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 CUL4AQ13619 759 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 SEC23AQ15436 765 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 USH1GQ495M9 461 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 TMEM240Q5SV17 173 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 AKNAD1Q5T1N1 836 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 VPS53Q5VIR6 699 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 FOXB2Q5VYV0 432 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 LAIR1Q6GTX8 287 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 CWC27Q6UX04 472 aaKnown RBP4.49□□□□□ -1.69
ATXN3-240ENST00000556339 Q6ZRM9 215 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 CHST3Q7LGC8 479 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 IQCA1Q86XH1 822 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 FBXO16Q8IX29 292 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-240ENST00000556339 FAM133AQ8N9E0 248 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 ANKRD53Q8N9V6 530 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 FAM184AQ8NB25 1140 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 OR6J1Q8NGC5 347 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 ESR2Q92731 530 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 GFM2Q969S9 779 aaKnown RBP4.49□□□□□ -1.69
ATXN3-240ENST00000556339 SYAP1Q96A49 352 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-240ENST00000556339 MAGEB10Q96LZ2 347 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-240ENST00000556339 FAM227BQ96M60 508 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 TTC14Q96N46 770 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 TMEM47Q9BQJ4 181 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 MTG1Q9BT17 334 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-240ENST00000556339 DHRS4Q9BTZ2 278 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 GPR87Q9BY21 358 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 SEZ6LQ9BYH1 1024 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 TRPV6Q9H1D0 765 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 UPF3AQ9H1J1 476 aaKnown RBP4.49□□□□□ -1.69
ATXN3-240ENST00000556339 SLC6A15Q9H2J7 730 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 HIPK3Q9H422 1215 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 KAT14Q9H8E8 782 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 SLC28A3Q9HAS3 691 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 IL23AQ9NPF7 189 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 IL17RBQ9NRM6 502 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 CYP39A1Q9NYL5 469 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 CTNNA3Q9UI47 895 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 MAGEL2Q9UJ55 1249 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 ANAPC4Q9UJX5 808 aa4.49□□□□□ -1.69
ATXN3-240ENST00000556339 MRPS23Q9Y3D9 190 aaKnown RBP4.49□□□□□ -1.69
ATXN3-240ENST00000556339 DDX49Q9Y6V7 483 aaKnown RBP4.49□□□□□ -1.69
ATXN3-240ENST00000556339 TCF20Q9UGU0 1960 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 178 ms