RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 SRRM3A6NNA2 597 aaPredicted RBP16.52■□□□□ 0.24
SUPT16H-205ENST00000556217 KIAA0391O15091 583 aaKnown RBP16.52■□□□□ 0.24
SUPT16H-205ENST00000556217 TNNC2P02585 160 aa16.52■□□□□ 0.24
SUPT16H-205ENST00000556217 IDEP14735 1019 aa16.52■□□□□ 0.24
SUPT16H-205ENST00000556217 ANXA13P27216 316 aa16.52■□□□□ 0.24
SUPT16H-205ENST00000556217 GRIK1P39086 918 aa16.52■□□□□ 0.24
SUPT16H-205ENST00000556217 SEC13P55735 322 aa16.52■□□□□ 0.24
SUPT16H-205ENST00000556217 C2orf27AQ580R0 203 aa16.52■□□□□ 0.24
SUPT16H-205ENST00000556217 PMS2CLQ68D20 193 aa16.52■□□□□ 0.24
SUPT16H-205ENST00000556217 ANO7Q6IWH7 933 aa16.52■□□□□ 0.24
SUPT16H-205ENST00000556217 USP49Q70CQ1 688 aa16.52■□□□□ 0.24
SUPT16H-205ENST00000556217 CYP2U1Q7Z449 544 aa16.52■□□□□ 0.24
SUPT16H-205ENST00000556217 KIAA1958Q8N8K9 716 aa16.52■□□□□ 0.24
SUPT16H-205ENST00000556217 ZSWIM2Q8NEG5 633 aa16.52■□□□□ 0.24
SUPT16H-205ENST00000556217 DNAJC19Q96DA6 116 aa16.52■□□□□ 0.24
SUPT16H-205ENST00000556217 HPDLQ96IR7 371 aa16.52■□□□□ 0.24
SUPT16H-205ENST00000556217 CNOT6LQ96LI5 555 aaKnown RBP16.52■□□□□ 0.24
SUPT16H-205ENST00000556217 SYT15Q9BQS2 421 aa16.52■□□□□ 0.24
SUPT16H-205ENST00000556217 LINC00597Q9H2U6 94 aa16.52■□□□□ 0.24
SUPT16H-205ENST00000556217 TMEM9BQ9NQ34 198 aa16.52■□□□□ 0.24
SUPT16H-205ENST00000556217 SIX4Q9UIU6 781 aa16.52■□□□□ 0.24
SUPT16H-205ENST00000556217 LHX6Q9UPM6 363 aa16.52■□□□□ 0.24
SUPT16H-205ENST00000556217 INVSQ9Y283 1065 aa16.52■□□□□ 0.24
SUPT16H-205ENST00000556217 DMXL2Q8TDJ6 3036 aa16.51■□□□□ 0.23
SUPT16H-205ENST00000556217 SLC9A3R1O14745 358 aaPredicted RBP16.51■□□□□ 0.23
SUPT16H-205ENST00000556217 ALDH1A2O94788 518 aa16.51■□□□□ 0.23
SUPT16H-205ENST00000556217 PPP3CCP48454 512 aa16.51■□□□□ 0.23
SUPT16H-205ENST00000556217 ZNF252P-AS1Q0IIN9 211 aa16.51■□□□□ 0.23
SUPT16H-205ENST00000556217 SURF1Q15526 300 aa16.51■□□□□ 0.23
SUPT16H-205ENST00000556217 CCDC142Q17RM4 750 aa16.51■□□□□ 0.23
SUPT16H-205ENST00000556217 CCDC73Q6ZRK6 1079 aa16.51■□□□□ 0.23
SUPT16H-205ENST00000556217 DENND5BQ6ZUT9 1274 aa16.51■□□□□ 0.23
SUPT16H-205ENST00000556217 RASSF3Q86WH2 238 aa16.51■□□□□ 0.23
SUPT16H-205ENST00000556217 GPD1LQ8N335 351 aa16.51■□□□□ 0.23
SUPT16H-205ENST00000556217 CBWD1Q9BRT8 395 aa16.51■□□□□ 0.23
SUPT16H-205ENST00000556217 TMEM121BQ9BXQ6 578 aaPredicted RBP16.51■□□□□ 0.23
SUPT16H-205ENST00000556217 TPSD1Q9BZJ3 242 aa16.51■□□□□ 0.23
SUPT16H-205ENST00000556217 PCIF1Q9H4Z3 704 aa16.51■□□□□ 0.23
SUPT16H-205ENST00000556217 MMP17Q9ULZ9 603 aa16.51■□□□□ 0.23
SUPT16H-205ENST00000556217 WASF3Q9UPY6 502 aa16.51■□□□□ 0.23
SUPT16H-205ENST00000556217 SRPRBQ9Y5M8 271 aaKnown RBP16.51■□□□□ 0.23
SUPT16H-205ENST00000556217 AKAP13Q12802 2813 aa16.51■□□□□ 0.23
SUPT16H-205ENST00000556217 K7EQS6 105 aa16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 LEFTY2O00292 366 aa16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 TRIM66O15016 1216 aa16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 HCRTO43612 131 aa16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 ATP2C2O75185 946 aa16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 CD2BP2O95400 341 aaKnown RBP16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 BDNFP23560 247 aa16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 OPRD1P41143 372 aa16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 CASP5P51878 434 aa16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 PSMC1P62191 440 aaKnown RBP16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 MRPS21P82921 87 aaKnown RBP16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 CYP27A1Q02318 531 aa16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 RING1Q06587 406 aa16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 DUOXA2Q1HG44 320 aa16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 SH3PXD2AQ5TCZ1 1133 aa16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 STXBP4Q6ZWJ1 553 aa16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 TTC30AQ86WT1 665 aa16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 MYLPFQ96A32 169 aa16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 SPACA7Q96KW9 195 aa16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 UPF2Q9HAU5 1272 aaKnown RBP16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 PANK4Q9NVE7 773 aa16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 INTS13Q9NVM9 706 aa16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 FBXO2Q9UK22 296 aaPredicted RBP16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 CLIC4Q9Y696 253 aa16.5■□□□□ 0.23
SUPT16H-205ENST00000556217 VPS37CA5D8V6 355 aaPredicted RBP16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 ZNF233A6NK53 670 aa16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 GIPC1O14908 333 aa16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 CEACAM1P13688 526 aa16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 SPINK2P20155 84 aa16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 PDCP20941 246 aa16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 LMO2P25791 158 aa16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 STAT6P42226 847 aa16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 DHPSP49366 369 aaPredicted RBP16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 SLC7A9P82251 487 aa16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 CRY1Q16526 586 aa16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 HSF5Q4G112 596 aaPredicted RBP16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 LMBRD2Q68DH5 695 aaPredicted RBP16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 LIMS2Q7Z4I7 341 aa16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 FILIP1Q7Z7B0 1213 aa16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 CCDC33Q8N5R6 958 aa16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 KBTBD7Q8WVZ9 684 aa16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 GATA6Q92908 595 aa16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 FAM84AQ96KN4 292 aa16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 MMS19Q96T76 1030 aa16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 TTLL2Q9BWV7 592 aa16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 CRTAC1Q9NQ79 661 aa16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 GCN1Q92616 2671 aaKnown RBP16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 FLNBO75369 2602 aaKnown RBP16.49■□□□□ 0.23
SUPT16H-205ENST00000556217 FRMD3A2A2Y4 597 aa16.48■□□□□ 0.23
SUPT16H-205ENST00000556217 ZNF840PA6NDX5 716 aa16.48■□□□□ 0.23
SUPT16H-205ENST00000556217 MAP3K13O43283 966 aa16.48■□□□□ 0.23
SUPT16H-205ENST00000556217 CYP17A1P05093 508 aa16.48■□□□□ 0.23
SUPT16H-205ENST00000556217 PDGFRBP09619 1106 aa16.48■□□□□ 0.23
SUPT16H-205ENST00000556217 CSRP1P21291 193 aaKnown RBP16.48■□□□□ 0.23
SUPT16H-205ENST00000556217 WARSP23381 471 aaKnown RBP16.48■□□□□ 0.23
SUPT16H-205ENST00000556217 EIF2DP41214 584 aaKnown RBP16.48■□□□□ 0.23
SUPT16H-205ENST00000556217 NOP14P78316 857 aaKnown RBP16.48■□□□□ 0.23
SUPT16H-205ENST00000556217 LMAN2Q12907 356 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms