RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 PKP1Q13835 747 aa23.02■■□□□ 1.28
SDR39U1-216ENST00000556175 RSPO4Q2I0M5 234 aaPredicted RBP23.02■■□□□ 1.28
SDR39U1-216ENST00000556175 FBXO43Q4G163 708 aa23.02■■□□□ 1.28
SDR39U1-216ENST00000556175 HEATR6Q6AI08 1181 aaKnown RBP23.02■■□□□ 1.28
SDR39U1-216ENST00000556175 WDR5BQ86VZ2 330 aa23.02■■□□□ 1.28
SDR39U1-216ENST00000556175 ARL14EPQ8N8R7 260 aaPredicted RBP23.02■■□□□ 1.28
SDR39U1-216ENST00000556175 TTC16Q8NEE8 873 aa23.02■■□□□ 1.28
SDR39U1-216ENST00000556175 SLC22A12Q96S37 553 aa23.02■■□□□ 1.28
SDR39U1-216ENST00000556175 P2RY13Q9BPV8 354 aa23.02■■□□□ 1.28
SDR39U1-216ENST00000556175 TTLL2Q9BWV7 592 aa23.02■■□□□ 1.28
SDR39U1-216ENST00000556175 ECT2Q9H8V3 914 aa23.02■■□□□ 1.28
SDR39U1-216ENST00000556175 SERTAD1Q9UHV2 236 aa23.02■■□□□ 1.28
SDR39U1-216ENST00000556175 GREB1Q4ZG55 1949 aa23.02■■□□□ 1.28
SDR39U1-216ENST00000556175 C2orf78A6NCI8 922 aa23.01■■□□□ 1.27
SDR39U1-216ENST00000556175 A8MXQ7 604 aa23.01■■□□□ 1.27
SDR39U1-216ENST00000556175 CLSTN1O94985 981 aa23.01■■□□□ 1.27
SDR39U1-216ENST00000556175 PTPN1P18031 435 aaKnown RBP23.01■■□□□ 1.27
SDR39U1-216ENST00000556175 GJA4P35212 333 aa23.01■■□□□ 1.27
SDR39U1-216ENST00000556175 MYL6P60660 151 aa23.01■■□□□ 1.27
SDR39U1-216ENST00000556175 DMWDQ09019 674 aa23.01■■□□□ 1.27
SDR39U1-216ENST00000556175 NR1H3Q13133 447 aa23.01■■□□□ 1.27
SDR39U1-216ENST00000556175 BIRC3Q13489 604 aa23.01■■□□□ 1.27
SDR39U1-216ENST00000556175 LPAL2Q16609 132 aa23.01■■□□□ 1.27
SDR39U1-216ENST00000556175 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.01■■□□□ 1.27
SDR39U1-216ENST00000556175 GRAMD1CQ8IYS0 662 aa23.01■■□□□ 1.27
SDR39U1-216ENST00000556175 SH3RF2Q8TEC5 729 aa23.01■■□□□ 1.27
SDR39U1-216ENST00000556175 TMEM174Q8WUU8 243 aa23.01■■□□□ 1.27
SDR39U1-216ENST00000556175 ZNF516Q92618 1163 aa23.01■■□□□ 1.27
SDR39U1-216ENST00000556175 CHFRQ96EP1 664 aa23.01■■□□□ 1.27
SDR39U1-216ENST00000556175 GZF1Q9H116 711 aaPredicted RBP23.01■■□□□ 1.27
SDR39U1-216ENST00000556175 VRTNQ9H8Y1 702 aa23.01■■□□□ 1.27
SDR39U1-216ENST00000556175 NXF1Q9UBU9 619 aaKnown RBP23.01■■□□□ 1.27
SDR39U1-216ENST00000556175 SLC8A2Q9UPR5 921 aa23.01■■□□□ 1.27
SDR39U1-216ENST00000556175 ANAPC1Q9H1A4 1944 aa23■■□□□ 1.27
SDR39U1-216ENST00000556175 CCDC163A0A0D9SF12 145 aa23■■□□□ 1.27
SDR39U1-216ENST00000556175 F8VP50 259 aa23■■□□□ 1.27
SDR39U1-216ENST00000556175 HRO43593 1189 aa23■■□□□ 1.27
SDR39U1-216ENST00000556175 ACTN4O43707 911 aaKnown RBP23■■□□□ 1.27
SDR39U1-216ENST00000556175 ZNF699Q32M78 642 aa23■■□□□ 1.27
SDR39U1-216ENST00000556175 CEP68Q76N32 757 aa23■■□□□ 1.27
SDR39U1-216ENST00000556175 SLC9A9Q8IVB4 645 aa23■■□□□ 1.27
SDR39U1-216ENST00000556175 KIAA1958Q8N8K9 716 aa23■■□□□ 1.27
SDR39U1-216ENST00000556175 SPRYD3Q8NCJ5 442 aa23■■□□□ 1.27
SDR39U1-216ENST00000556175 PAGE5Q96GU1 130 aa23■■□□□ 1.27
SDR39U1-216ENST00000556175 XYLT2Q9H1B5 865 aa23■■□□□ 1.27
SDR39U1-216ENST00000556175 C2orf42Q9NWW7 574 aa23■■□□□ 1.27
SDR39U1-216ENST00000556175 WNT6Q9Y6F9 365 aa23■■□□□ 1.27
SDR39U1-216ENST00000556175 ATP8B3O60423 1300 aa23■■□□□ 1.27
SDR39U1-216ENST00000556175 KLRC4O43908 158 aa22.99■■□□□ 1.27
SDR39U1-216ENST00000556175 NFATC1O95644 943 aa22.99■■□□□ 1.27
SDR39U1-216ENST00000556175 CMA1P23946 247 aa22.99■■□□□ 1.27
SDR39U1-216ENST00000556175 GALK1P51570 392 aa22.99■■□□□ 1.27
SDR39U1-216ENST00000556175 USP46P62068 366 aa22.99■■□□□ 1.27
SDR39U1-216ENST00000556175 CLDN10P78369 228 aa22.99■■□□□ 1.27
SDR39U1-216ENST00000556175 STK4Q13043 487 aa22.99■■□□□ 1.27
SDR39U1-216ENST00000556175 EML3Q32P44 896 aa22.99■■□□□ 1.27
SDR39U1-216ENST00000556175 ZNF667Q5HYK9 610 aa22.99■■□□□ 1.27
SDR39U1-216ENST00000556175 TDRD10Q5VZ19 366 aaKnown RBP22.99■■□□□ 1.27
SDR39U1-216ENST00000556175 B3GALNT2Q8NCR0 500 aa22.99■■□□□ 1.27
SDR39U1-216ENST00000556175 KIAA0895Q8NCT3 520 aa22.99■■□□□ 1.27
SDR39U1-216ENST00000556175 CCDC26Q8TAB7 109 aa22.99■■□□□ 1.27
SDR39U1-216ENST00000556175 PARD3BQ8TEW8 1205 aa22.99■■□□□ 1.27
SDR39U1-216ENST00000556175 SLITRK1Q96PX8 696 aa22.99■■□□□ 1.27
SDR39U1-216ENST00000556175 CDV3Q9UKY7 258 aaKnown RBP22.99■■□□□ 1.27
SDR39U1-216ENST00000556175 HELZP42694 1942 aaKnown RBP22.99■■□□□ 1.27
SDR39U1-216ENST00000556175 ZNF840PA6NDX5 716 aa22.98■■□□□ 1.27
SDR39U1-216ENST00000556175 LRRIQ3A6PVS8 624 aaPredicted RBP22.98■■□□□ 1.27
SDR39U1-216ENST00000556175 PDXKO00764 312 aa22.98■■□□□ 1.27
SDR39U1-216ENST00000556175 FOXD2O60548 495 aaPredicted RBP22.98■■□□□ 1.27
SDR39U1-216ENST00000556175 RNF40O75150 1001 aa22.98■■□□□ 1.27
SDR39U1-216ENST00000556175 KIF20AO95235 890 aa22.98■■□□□ 1.27
SDR39U1-216ENST00000556175 EGFP01133 1207 aa22.98■■□□□ 1.27
SDR39U1-216ENST00000556175 P4HA1P13674 534 aa22.98■■□□□ 1.27
SDR39U1-216ENST00000556175 PFKFB1P16118 471 aa22.98■■□□□ 1.27
SDR39U1-216ENST00000556175 TGM1P22735 817 aa22.98■■□□□ 1.27
SDR39U1-216ENST00000556175 NCOA4Q13772 614 aa22.98■■□□□ 1.27
SDR39U1-216ENST00000556175 KMT5BQ4FZB7 885 aa22.98■■□□□ 1.27
SDR39U1-216ENST00000556175 CD101Q93033 1021 aa22.98■■□□□ 1.27
SDR39U1-216ENST00000556175 TNIP3Q96KP6 325 aa22.98■■□□□ 1.27
SDR39U1-216ENST00000556175 SPATA32Q96LK8 384 aa22.98■■□□□ 1.27
SDR39U1-216ENST00000556175 DPEP3Q9H4B8 488 aa22.98■■□□□ 1.27
SDR39U1-216ENST00000556175 PARD6AQ9NPB6 346 aa22.98■■□□□ 1.27
SDR39U1-216ENST00000556175 NME7Q9Y5B8 376 aa22.98■■□□□ 1.27
SDR39U1-216ENST00000556175 CASP4P49662 377 aa22.97■■□□□ 1.27
SDR39U1-216ENST00000556175 KRT85P78386 507 aa22.97■■□□□ 1.27
SDR39U1-216ENST00000556175 SLC7A9P82251 487 aa22.97■■□□□ 1.27
SDR39U1-216ENST00000556175 SPEM2Q0P670 501 aa22.97■■□□□ 1.27
SDR39U1-216ENST00000556175 CAMKK1Q8N5S9 505 aa22.97■■□□□ 1.27
SDR39U1-216ENST00000556175 PDZD8Q8NEN9 1154 aa22.97■■□□□ 1.27
SDR39U1-216ENST00000556175 CCDC47Q96A33 483 aaKnown RBP22.97■■□□□ 1.27
SDR39U1-216ENST00000556175 ACDQ96AP0 544 aa22.97■■□□□ 1.27
SDR39U1-216ENST00000556175 ZNF518BQ9C0D4 1074 aa22.97■■□□□ 1.27
SDR39U1-216ENST00000556175 DMAC2Q9NW81 257 aa22.97■■□□□ 1.27
SDR39U1-216ENST00000556175 A0A1B0GVL5 298 aa22.96■■□□□ 1.27
SDR39U1-216ENST00000556175 LEFTY2O00292 366 aa22.96■■□□□ 1.27
SDR39U1-216ENST00000556175 RTN3O95197 1032 aaPredicted RBP22.96■■□□□ 1.27
SDR39U1-216ENST00000556175 NR3C1P04150 777 aa22.96■■□□□ 1.27
SDR39U1-216ENST00000556175 SRSF5Q13243 272 aaKnown RBP22.96■■□□□ 1.27
SDR39U1-216ENST00000556175 PKN3Q6P5Z2 889 aa22.96■■□□□ 1.27
SDR39U1-216ENST00000556175 PLEKHO2Q8TD55 490 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms