RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 ANKRD20A8PQ5CZ79 823 aa15.51■□□□□ 0.07
NEK9-209ENST00000556170 MDH1BQ5I0G3 518 aa15.51■□□□□ 0.07
NEK9-209ENST00000556170 DONSONQ9NYP3 566 aa15.51■□□□□ 0.07
NEK9-209ENST00000556170 SNCAIPQ9Y6H5 919 aa15.51■□□□□ 0.07
NEK9-209ENST00000556170 LAMB1P07942 1786 aa15.51■□□□□ 0.07
NEK9-209ENST00000556170 XPOTO43592 962 aaKnown RBP15.51■□□□□ 0.07
NEK9-209ENST00000556170 NUMBP49757 651 aa15.51■□□□□ 0.07
NEK9-209ENST00000556170 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.51■□□□□ 0.07
NEK9-209ENST00000556170 SGSM3Q96HU1 749 aa15.51■□□□□ 0.07
NEK9-209ENST00000556170 TRIM55Q9BYV6 548 aa15.51■□□□□ 0.07
NEK9-209ENST00000556170 ZNF518BQ9C0D4 1074 aa15.51■□□□□ 0.07
NEK9-209ENST00000556170 SPON1Q9HCB6 807 aa15.51■□□□□ 0.07
NEK9-209ENST00000556170 SLCO1B3Q9NPD5 702 aa15.51■□□□□ 0.07
NEK9-209ENST00000556170 GPR25O00155 361 aa15.51■□□□□ 0.07
NEK9-209ENST00000556170 GAS2O43903 313 aaKnown RBP15.51■□□□□ 0.07
NEK9-209ENST00000556170 LGALS2P05162 132 aa15.51■□□□□ 0.07
NEK9-209ENST00000556170 EIF4BP23588 611 aaKnown RBP15.51■□□□□ 0.07
NEK9-209ENST00000556170 SLC8A1P32418 973 aa15.51■□□□□ 0.07
NEK9-209ENST00000556170 MCL1Q07820 350 aa15.51■□□□□ 0.07
NEK9-209ENST00000556170 RBBP5Q15291 538 aaKnown RBP15.51■□□□□ 0.07
NEK9-209ENST00000556170 PRAMEF19Q5SWL8 479 aa15.51■□□□□ 0.07
NEK9-209ENST00000556170 TMEM63BQ5T3F8 832 aa15.51■□□□□ 0.07
NEK9-209ENST00000556170 MROH9Q5TGP6 573 aa15.51■□□□□ 0.07
NEK9-209ENST00000556170 PLEKHA7Q6IQ23 1121 aa15.51■□□□□ 0.07
NEK9-209ENST00000556170 CRELD2Q6UXH1 353 aaPredicted RBP15.51■□□□□ 0.07
NEK9-209ENST00000556170 FAM111AQ96PZ2 611 aa15.51■□□□□ 0.07
NEK9-209ENST00000556170 HERPUD2Q9BSE4 406 aa15.51■□□□□ 0.07
NEK9-209ENST00000556170 SIK2Q9H0K1 926 aa15.51■□□□□ 0.07
NEK9-209ENST00000556170 KLHL8Q9P2G9 620 aaPredicted RBP15.51■□□□□ 0.07
NEK9-209ENST00000556170 ARHGAP42A6NI28 874 aa15.5■□□□□ 0.07
NEK9-209ENST00000556170 CCDC14Q49A88 953 aa15.5■□□□□ 0.07
NEK9-209ENST00000556170 GBP7Q8N8V2 638 aaPredicted RBP15.5■□□□□ 0.07
NEK9-209ENST00000556170 PAFAH2Q99487 392 aa15.5■□□□□ 0.07
NEK9-209ENST00000556170 C12orf65Q9H3J6 166 aaKnown RBP15.5■□□□□ 0.07
NEK9-209ENST00000556170 PPARGC1AQ9UBK2 798 aaKnown RBP15.5■□□□□ 0.07
NEK9-209ENST00000556170 ZFP69BQ9UJL9 534 aa15.5■□□□□ 0.07
NEK9-209ENST00000556170 PHTF1Q9UMS5 762 aa15.5■□□□□ 0.07
NEK9-209ENST00000556170 NRAPQ86VF7 1730 aa15.5■□□□□ 0.07
NEK9-209ENST00000556170 VDRP11473 427 aa15.5■□□□□ 0.07
NEK9-209ENST00000556170 TARSP26639 723 aaKnown RBP15.5■□□□□ 0.07
NEK9-209ENST00000556170 MMP13P45452 471 aa15.5■□□□□ 0.07
NEK9-209ENST00000556170 HADHBP55084 474 aaKnown RBP15.5■□□□□ 0.07
NEK9-209ENST00000556170 GEMIN4P57678 1058 aaKnown RBP15.5■□□□□ 0.07
NEK9-209ENST00000556170 PAN2Q504Q3 1202 aaKnown RBP15.5■□□□□ 0.07
NEK9-209ENST00000556170 RWDD4Q6NW29 188 aaKnown RBP15.5■□□□□ 0.07
NEK9-209ENST00000556170 PID1Q7Z2X4 250 aa15.5■□□□□ 0.07
NEK9-209ENST00000556170 CDKL2Q92772 493 aa15.5■□□□□ 0.07
NEK9-209ENST00000556170 MINDY3Q9H8M7 445 aa15.5■□□□□ 0.07
NEK9-209ENST00000556170 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.5■□□□□ 0.07
NEK9-209ENST00000556170 CYP1A1P04798 512 aaPredicted RBP15.5■□□□□ 0.07
NEK9-209ENST00000556170 ELK3P41970 407 aa15.5■□□□□ 0.07
NEK9-209ENST00000556170 ZNF200P98182 395 aaPredicted RBP15.5■□□□□ 0.07
NEK9-209ENST00000556170 KDELC2Q7Z4H8 507 aa15.5■□□□□ 0.07
NEK9-209ENST00000556170 AGR3Q8TD06 166 aa15.5■□□□□ 0.07
NEK9-209ENST00000556170 RAB3IPQ96QF0 476 aaPredicted RBP15.5■□□□□ 0.07
NEK9-209ENST00000556170 TXNRD2Q9NNW7 524 aa15.5■□□□□ 0.07
NEK9-209ENST00000556170 TXLNGQ9NUQ3 528 aa15.5■□□□□ 0.07
NEK9-209ENST00000556170 KDELR1P24390 212 aa15.49■□□□□ 0.07
NEK9-209ENST00000556170 ACAT1P24752 427 aaKnown RBP15.49■□□□□ 0.07
NEK9-209ENST00000556170 BMPR2Q13873 1038 aa15.49■□□□□ 0.07
NEK9-209ENST00000556170 MORF4L2Q15014 288 aa15.49■□□□□ 0.07
NEK9-209ENST00000556170 CYP4X1Q8N118 509 aa15.49■□□□□ 0.07
NEK9-209ENST00000556170 ARF4P18085 180 aaPredicted RBP15.49■□□□□ 0.07
NEK9-209ENST00000556170 GNL1P36915 607 aaPredicted RBP15.49■□□□□ 0.07
NEK9-209ENST00000556170 POU5F1Q01860 360 aaKnown RBP15.49■□□□□ 0.07
NEK9-209ENST00000556170 SPOCK2Q92563 424 aa15.49■□□□□ 0.07
NEK9-209ENST00000556170 CNPY3Q9BT09 278 aa15.49■□□□□ 0.07
NEK9-209ENST00000556170 B3GNT5Q9BYG0 378 aa15.49■□□□□ 0.07
NEK9-209ENST00000556170 VPS11Q9H270 941 aa15.49■□□□□ 0.07
NEK9-209ENST00000556170 MROH8Q9H579 483 aa15.49■□□□□ 0.07
NEK9-209ENST00000556170 IRAK4Q9NWZ3 460 aa15.49■□□□□ 0.07
NEK9-209ENST00000556170 TIMM13Q9Y5L4 95 aaPredicted RBP15.49■□□□□ 0.07
NEK9-209ENST00000556170 TRIM49D1C9J1S8 452 aa15.49■□□□□ 0.07
NEK9-209ENST00000556170 AVILO75366 819 aa15.49■□□□□ 0.07
NEK9-209ENST00000556170 BAG2O95816 211 aa15.49■□□□□ 0.07
NEK9-209ENST00000556170 ESRRAP11474 423 aaPredicted RBP15.49■□□□□ 0.07
NEK9-209ENST00000556170 EPHX2P34913 555 aa15.49■□□□□ 0.07
NEK9-209ENST00000556170 SCARA3Q6AZY7 606 aa15.49■□□□□ 0.07
NEK9-209ENST00000556170 UNC45BQ8IWX7 931 aa15.49■□□□□ 0.07
NEK9-209ENST00000556170 C1orf127Q8N9H9 656 aa15.49■□□□□ 0.07
NEK9-209ENST00000556170 OSBPL7Q9BZF2 842 aa15.49■□□□□ 0.07
NEK9-209ENST00000556170 PCDH9Q9HC56 1237 aa15.49■□□□□ 0.07
NEK9-209ENST00000556170 LAMB2P55268 1798 aa15.48■□□□□ 0.07
NEK9-209ENST00000556170 hCG_1818297A0A087WSY0 165 aa15.48■□□□□ 0.07
NEK9-209ENST00000556170 MSCO60682 206 aa15.48■□□□□ 0.07
NEK9-209ENST00000556170 RPL22P35268 128 aaKnown RBP15.48■□□□□ 0.07
NEK9-209ENST00000556170 ITKQ08881 620 aa15.48■□□□□ 0.07
NEK9-209ENST00000556170 CFAP61Q8NHU2 1237 aa15.48■□□□□ 0.07
NEK9-209ENST00000556170 KAT2BQ92831 832 aa15.48■□□□□ 0.07
NEK9-209ENST00000556170 SYT11Q9BT88 431 aa15.48■□□□□ 0.07
NEK9-209ENST00000556170 NIFKQ9BYG3 293 aaKnown RBP15.48■□□□□ 0.07
NEK9-209ENST00000556170 HAPLN2Q9GZV7 340 aa15.48■□□□□ 0.07
NEK9-209ENST00000556170 PCMTD2Q9NV79 361 aa15.48■□□□□ 0.07
NEK9-209ENST00000556170 HMGXB4Q9UGU5 601 aa15.48■□□□□ 0.07
NEK9-209ENST00000556170 A0A1W2PPM1 405 aa15.48■□□□□ 0.07
NEK9-209ENST00000556170 PDHXO00330 501 aa15.48■□□□□ 0.07
NEK9-209ENST00000556170 RPA3P35244 121 aaPredicted RBP15.48■□□□□ 0.07
NEK9-209ENST00000556170 ARFIP2P53365 341 aa15.48■□□□□ 0.07
NEK9-209ENST00000556170 SH3PXD2AQ5TCZ1 1133 aa15.48■□□□□ 0.07
NEK9-209ENST00000556170 RAPH1Q70E73 1250 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms