RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 LINC01565O15544 149 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 AP5Z1O43299 807 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 RFPL2O75678 378 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 MICAL2O94851 1124 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 VNN2O95498 520 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 LSM8O95777 96 aaKnown RBP8.07□□□□□ -1.12
TDP1-214ENST00000556063 GLP2RO95838 553 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 GYPCP04921 128 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 PNMA6AP0CW24 399 aaPredicted RBP8.07□□□□□ -1.12
TDP1-214ENST00000556063 KCNA5P22460 613 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 CASP14P31944 242 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 ACADSBP45954 432 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 MAP3K7CLP57077 242 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 CDR2Q01850 454 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 KLHL30Q0D2K2 578 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 GSE1Q14687 1217 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 DDR2Q16832 855 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 CCDC142Q17RM4 750 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 PUS10Q3MIT2 529 aaKnown RBP8.07□□□□□ -1.12
TDP1-214ENST00000556063 PABPC1LQ4VXU2 614 aaKnown RBP8.07□□□□□ -1.12
TDP1-214ENST00000556063 PPP1R2P3Q6NXS1 205 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 TMC5Q6UXY8 1006 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 CLEC20AQ6ZU45 233 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 DENND5BQ6ZUT9 1274 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 PAQR9Q6ZVX9 377 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 DNAJB7Q7Z6W7 309 aaPredicted RBP8.07□□□□□ -1.12
TDP1-214ENST00000556063 GPR149Q86SP6 731 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 NUP93Q8N1F7 819 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 TTC9BQ8N6N2 239 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 EPS8L1Q8TE68 723 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 IPO4Q8TEX9 1081 aaKnown RBP8.07□□□□□ -1.12
TDP1-214ENST00000556063 GIPC2Q8TF65 315 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 PSMG2Q969U7 264 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 HSFY1Q96LI6 401 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 SLITRK1Q96PX8 696 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 GCNAQ96QF7 691 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 LPIN3Q9BQK8 851 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 GPR88Q9GZN0 384 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 LHX5Q9H2C1 402 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 CRISPLD1Q9H336 500 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 FBXO44Q9H4M3 255 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 CSNK1G1Q9HCP0 422 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 ASAH2Q9NR71 780 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 CLEC1BQ9P126 229 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 IMPACTQ9P2X3 320 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 PCDHGC3Q9UN70 934 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.06□□□□□ -1.12
TDP1-214ENST00000556063 SLC38A8A6NNN8 435 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 SART1O43290 800 aaKnown RBP8.06□□□□□ -1.12
TDP1-214ENST00000556063 MFAP3LO75121 409 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 TBX10O75333 385 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 SOAT2O75908 522 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 PAPLNO95428 1278 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 SERPING1P05155 500 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 ATF6P18850 670 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 TNFAIP3P21580 790 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 YWHAQP27348 245 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 CDC25CP30307 473 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 HNRNPH3P31942 346 aaKnown RBP8.06□□□□□ -1.12
TDP1-214ENST00000556063 PRKCIP41743 596 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 PLA2G4AP47712 749 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 PPP3CCP48454 512 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 CDR1P51861 262 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 RBM10P98175 930 aaKnown RBP8.06□□□□□ -1.12
TDP1-214ENST00000556063 PDE4CQ08493 712 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 SMAD4Q13485 552 aaKnown RBP8.06□□□□□ -1.12
TDP1-214ENST00000556063 TDRD12Q587J7 1177 aaKnown RBP8.06□□□□□ -1.12
TDP1-214ENST00000556063 SYCE2Q6PIF2 218 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 PDZD4Q76G19 769 aaPredicted RBP8.06□□□□□ -1.12
TDP1-214ENST00000556063 IRF2BP2Q7Z5L9 587 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 NOP9Q86U38 636 aaKnown RBP8.06□□□□□ -1.12
TDP1-214ENST00000556063 PIGZQ86VD9 579 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 SIX6OS1Q8N1H7 587 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 C12orf76Q8N812 135 aaPredicted RBP8.06□□□□□ -1.12
TDP1-214ENST00000556063 PDZD8Q8NEN9 1154 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 UBA3Q8TBC4 463 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 STK32AQ8WU08 396 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 KCTD13Q8WZ19 329 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 SECISBP2LQ93073 1101 aaKnown RBP8.06□□□□□ -1.12
TDP1-214ENST00000556063 TRMT2BQ96GJ1 504 aaKnown RBP8.06□□□□□ -1.12
TDP1-214ENST00000556063 MSLNLQ96KJ4 702 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 MYRFLQ96LU7 910 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 KCNK16Q96T55 309 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 SMOQ99835 787 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 AGPAT1Q99943 283 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 CORO1BQ9BR76 489 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 SYNCQ9H7C4 482 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 CYLDQ9NQC7 956 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 ST7Q9NRC1 585 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 SEPT11Q9NVA2 429 aaKnown RBP8.06□□□□□ -1.12
TDP1-214ENST00000556063 ZMYM5Q9UJ78 669 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 NOCTQ9UK39 431 aaKnown RBP8.06□□□□□ -1.12
TDP1-214ENST00000556063 MAGED2Q9UNF1 606 aaPredicted RBP8.06□□□□□ -1.12
TDP1-214ENST00000556063 DOCK6Q96HP0 2047 aa8.06□□□□□ -1.12
TDP1-214ENST00000556063 ZNF638Q14966 1978 aaKnown RBP8.05□□□□□ -1.12
TDP1-214ENST00000556063 H3BQ06 376 aaPredicted RBP8.05□□□□□ -1.12
TDP1-214ENST00000556063 NRDCO43847 1150 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 FBXO21O94952 628 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 RHOP08100 348 aa8.05□□□□□ -1.12
TDP1-214ENST00000556063 MMEP08473 750 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms