RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 ZNF806P0C7X5 589 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 DLATP10515 647 aaKnown RBP8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 BDNFP23560 247 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 EIF2DP41214 584 aaKnown RBP8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 RAP1GAPP47736 663 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 ME1P48163 572 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 MCCD1P59942 119 aaPredicted RBP8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 TNNC1P63316 161 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 KCNB1Q14721 858 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 SGSM1Q2NKQ1 1148 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 HSF5Q4G112 596 aaPredicted RBP8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 SDHAF4Q5VUM1 108 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 TDRD10Q5VZ19 366 aaKnown RBP8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 SCARA3Q6AZY7 606 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 PRR23BQ6ZRT6 265 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 Q6ZS52 159 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 DDX42Q86XP3 938 aaKnown RBP eCLIP8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 CEP57L1Q8IYX8 460 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 NUP93Q8N1F7 819 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 ARL14EPQ8N8R7 260 aaPredicted RBP8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 RDH13Q8NBN7 331 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 GLIS3Q8NEA6 775 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 PDZD8Q8NEN9 1154 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 OR6B3Q8NGW1 331 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 TTC8Q8TAM2 541 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 KCNV2Q8TDN2 545 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 SH3RF2Q8TEC5 729 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 NOC3LQ8WTT2 800 aaKnown RBP8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 ZNF516Q92618 1163 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 TAF4BQ92750 862 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 HPS3Q969F9 1004 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 MYLPFQ96A32 169 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 ACDQ96AP0 544 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 OTUB2Q96DC9 234 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 CHFRQ96EP1 664 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 TNIP3Q96KP6 325 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 SLITRK1Q96PX8 696 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 CYP2S1Q96SQ9 504 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 ELOVL4Q9GZR5 314 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 SMG9Q9H0W8 520 aaKnown RBP8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 XYLT2Q9H1B5 865 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 PARD6AQ9NPB6 346 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 TBC1D14Q9P2M4 693 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 CDV3Q9UKY7 258 aaKnown RBP8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 DENND4CQ5VZ89 1909 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 WDR87Q6ZQQ6 2873 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 COL4A3Q01955 1670 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 PTPRJQ12913 1337 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 TCHHQ07283 1943 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 FAM92AA1XBS5 289 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 A8MXQ7 604 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 RNF40O75150 1001 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 RPP40O75818 363 aaKnown RBP8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 HSP90AA1P07900 732 aaKnown RBP8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 P4HA1P13674 534 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 ARSAP15289 507 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 CMA1P23946 247 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 TUBP50607 506 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 MRPS21P82921 87 aaKnown RBP8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 CYP27A1Q02318 531 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 SPEM2Q0P670 501 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 CUL4BQ13620 913 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 NFIL3Q16649 462 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 PREPLQ4J6C6 727 aaPredicted RBP8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 LMBRD2Q68DH5 695 aaPredicted RBP8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 TRIM68Q6AZZ1 485 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 PRR23CQ6ZRP0 262 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 CEP68Q76N32 757 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 UNC93AQ86WB7 457 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 HSCBQ8IWL3 235 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 CRYBG2Q8N1P7 616 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 FAM160A2Q8N612 972 aaPredicted RBP8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 STKLD1Q8NE28 680 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 RIN3Q8TB24 985 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 TMC2Q8TDI7 906 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 CCDC127Q96BQ5 260 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 FAXDC2Q96IV6 333 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 SLC22A12Q96S37 553 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 MRPL45Q9BRJ2 306 aaKnown RBP8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 GZF1Q9H116 711 aaPredicted RBP8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 FBRSL1Q9HCM7 1045 aaKnown RBP8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 SLC39A2Q9NP94 309 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 FOXD4L1Q9NU39 408 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 FRYLO94915 3013 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 DMXL1Q9Y485 3027 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 TSC2P49815 1807 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 ATP8B3O60423 1300 aa8.29□□□□□ -1.08
PTCSC3-201ENST00000556013 FAM237AA0A1B0GTK4 181 aa8.28□□□□□ -1.08
PTCSC3-201ENST00000556013 E2F8A0AVK6 867 aa8.28□□□□□ -1.08
PTCSC3-201ENST00000556013 MED19A0JLT2 244 aaPredicted RBP8.28□□□□□ -1.08
PTCSC3-201ENST00000556013 C2orf78A6NCI8 922 aa8.28□□□□□ -1.08
PTCSC3-201ENST00000556013 F8VP50 259 aa8.28□□□□□ -1.08
PTCSC3-201ENST00000556013 LEFTY2O00292 366 aa8.28□□□□□ -1.08
PTCSC3-201ENST00000556013 TULP1O00294 542 aaPredicted RBP8.28□□□□□ -1.08
PTCSC3-201ENST00000556013 AXIN1O15169 862 aa8.28□□□□□ -1.08
PTCSC3-201ENST00000556013 KLRC4O43908 158 aa8.28□□□□□ -1.08
PTCSC3-201ENST00000556013 PHACTR2O75167 634 aa8.28□□□□□ -1.08
PTCSC3-201ENST00000556013 RHOBTB1O94844 696 aa8.28□□□□□ -1.08
PTCSC3-201ENST00000556013 EPN2O95208 641 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms