RNA–Protein interactions for RNA: ENST00000555668.5

GPHN-210, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-210ENST00000555668 FAM173BQ6P4H8 233 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 LIPIQ6XZB0 460 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 ZNF600Q6ZNG1 722 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 PTF1AQ7RTS3 328 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 MRPL10Q7Z7H8 261 aaKnown RBP4.29□□□□□ -1.72
GPHN-210ENST00000555668 PATL1Q86TB9 770 aaKnown RBP4.29□□□□□ -1.72
GPHN-210ENST00000555668 CTAGE6Q86UF2 777 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 GTF2IRD2Q86UP8 949 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 TRIM59Q8IWR1 403 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 CTAGE4Q8IX94 777 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 TMEM57Q8N5G2 664 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 ENAHQ8N8S7 591 aaPredicted RBP4.29□□□□□ -1.72
GPHN-210ENST00000555668 CAGE1Q8TC20 777 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 SPATA18Q8TC71 538 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 FNDC8Q8TC99 324 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 FBXO41Q8TF61 875 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 CCT6BQ92526 530 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 FAM149B1Q96BN6 582 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 PGBD4Q96DM1 585 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 TMA16Q96EY4 203 aaKnown RBP4.29□□□□□ -1.72
GPHN-210ENST00000555668 CYFIP2Q96F07 1278 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 IFT74Q96LB3 600 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 TEPSINQ96N21 525 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 CCT8L2Q96SF2 557 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 PNKPQ96T60 521 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 CIB1Q99828 191 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 TUBA1CQ9BQE3 449 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 GPATCH1Q9BRR8 931 aaKnown RBP4.29□□□□□ -1.72
GPHN-210ENST00000555668 TTPALQ9BTX7 342 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 FTOQ9C0B1 505 aaKnown RBP eCLIP4.29□□□□□ -1.72
GPHN-210ENST00000555668 CAAP1Q9H8G2 361 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 PSTPIP2Q9H939 334 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 CAPN10Q9HC96 672 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 VTA1Q9NP79 307 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 FANCFQ9NPI8 374 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 C8orf4Q9NR00 106 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 CYP26B1Q9NR63 512 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 THAP1Q9NVV9 213 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 ARHGEF38Q9NXL2 777 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 DDX56Q9NY93 547 aaKnown RBP4.29□□□□□ -1.72
GPHN-210ENST00000555668 DLGAP2Q9P1A6 1054 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 KIF17Q9P2E2 1029 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 MBD2Q9UBB5 411 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 EPS15L1Q9UBC2 864 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 HMGXB4Q9UGU5 601 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 PGAP2Q9UHJ9 254 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 RIMKLBQ9ULI2 386 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 VANGL2Q9ULK5 521 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 DDX19BQ9UMR2 479 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 RPL26L1Q9UNX3 145 aaKnown RBP4.29□□□□□ -1.72
GPHN-210ENST00000555668 SLC12A4Q9UP95 1085 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 HEY1Q9Y5J3 304 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 PPP2R3BQ9Y5P8 575 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 NOX1Q9Y5S8 564 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 SLC4A4Q9Y6R1 1079 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 EFCAB6Q5THR3 1501 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 LRRIQ1Q96JM4 1722 aa4.29□□□□□ -1.72
GPHN-210ENST00000555668 SBNO1A3KN83 1393 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 RNF17Q9BXT8 1623 aaKnown RBP4.28□□□□□ -1.72
GPHN-210ENST00000555668 BIVM-ERCC5R4GMW8 1640 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 WNK3Q9BYP7 1800 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 FAM170AA1A519 330 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 SH3D21A4FU49 640 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 RSPH10B2B2RC85 870 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 GOLGA8RI6L899 631 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 DNM1LO00429 736 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 IFRD1O00458 451 aaPredicted RBP4.28□□□□□ -1.72
GPHN-210ENST00000555668 FBP2O00757 339 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 APOL1O14791 398 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 SMAD7O15105 426 aaKnown RBP4.28□□□□□ -1.72
GPHN-210ENST00000555668 PFKFB2O60825 505 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 TCEA3O75764 348 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 OR5F1O95221 314 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 CRYZL1O95825 349 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 GNA14O95837 355 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 ECDO95905 644 aaPredicted RBP4.28□□□□□ -1.72
GPHN-210ENST00000555668 SERPINC1P01008 464 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 ITGB3P05106 788 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 THBDP07204 575 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 RSPH10BP0C881 870 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 MYZAPP0CAP1 466 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 KRT13P13646 458 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 ZNF3P17036 446 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 TBXAS1P24557 533 aaPredicted RBP4.28□□□□□ -1.72
GPHN-210ENST00000555668 TMOD1P28289 359 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 RPL9P32969 192 aaKnown RBP4.28□□□□□ -1.72
GPHN-210ENST00000555668 PSMC2P35998 433 aaKnown RBP4.28□□□□□ -1.72
GPHN-210ENST00000555668 TRAPPC10P48553 1259 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 PTDSS1P48651 473 aaKnown RBP4.28□□□□□ -1.72
GPHN-210ENST00000555668 SARSP49591 514 aaKnown RBP4.28□□□□□ -1.72
GPHN-210ENST00000555668 HSD17B4P51659 736 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 MAP3K7CLP57077 242 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 BPIFB3P59826 476 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 GNG11P61952 73 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 PPP2R2AP63151 447 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 S100A12P80511 92 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 RELAQ04206 551 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 CDK18Q07002 472 aa4.28□□□□□ -1.72
GPHN-210ENST00000555668 CACNB2Q08289 660 aaPredicted RBP4.28□□□□□ -1.72
GPHN-210ENST00000555668 KLHL30Q0D2K2 578 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms