RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 DNAI2Q9GZS0 605 aa15.08■□□□□ 0
SHMT2-217ENST00000555116 ATXN3LQ9H3M9 355 aa15.08■□□□□ 0
SHMT2-217ENST00000555116 EPHX3Q9H6B9 360 aa15.08■□□□□ 0
SHMT2-217ENST00000555116 CSNK1G1Q9HCP0 422 aa15.08■□□□□ 0
SHMT2-217ENST00000555116 MYO16Q9Y6X6 1858 aa15.07■□□□□ 0
SHMT2-217ENST00000555116 TADA3O75528 432 aa15.07■□□□□ 0
SHMT2-217ENST00000555116 BEST1O76090 585 aa15.07■□□□□ 0
SHMT2-217ENST00000555116 ZNF18P17022 549 aa15.07■□□□□ 0
SHMT2-217ENST00000555116 ADORA2BP29275 332 aa15.07■□□□□ 0
SHMT2-217ENST00000555116 USP46P62068 366 aa15.07■□□□□ 0
SHMT2-217ENST00000555116 KRT31Q15323 416 aa15.07■□□□□ 0
SHMT2-217ENST00000555116 FAM78AQ5JUQ0 283 aa15.07■□□□□ 0
SHMT2-217ENST00000555116 STXBP5Q5T5C0 1151 aa15.07■□□□□ 0
SHMT2-217ENST00000555116 PPP1R26Q5T8A7 1209 aaPredicted RBP15.07■□□□□ 0
SHMT2-217ENST00000555116 DENND5BQ6ZUT9 1274 aa15.07■□□□□ 0
SHMT2-217ENST00000555116 AOPEPQ8N6M6 819 aa15.07■□□□□ 0
SHMT2-217ENST00000555116 RPP25Q9BUL9 199 aaKnown RBP15.07■□□□□ 0
SHMT2-217ENST00000555116 SMOC2Q9H3U7 446 aa15.07■□□□□ 0
SHMT2-217ENST00000555116 SIX2Q9NPC8 291 aa15.07■□□□□ 0
SHMT2-217ENST00000555116 DMAP1Q9NPF5 467 aaPredicted RBP15.07■□□□□ 0
SHMT2-217ENST00000555116 TAB2Q9NYJ8 693 aa15.07■□□□□ 0
SHMT2-217ENST00000555116 UXTQ9UBK9 157 aaPredicted RBP15.07■□□□□ 0
SHMT2-217ENST00000555116 SORCS3Q9UPU3 1222 aa15.07■□□□□ 0
SHMT2-217ENST00000555116 NUMBLQ9Y6R0 609 aa15.07■□□□□ 0
SHMT2-217ENST00000555116 RNF225M0QZC1 329 aaPredicted RBP15.06■□□□□ 0
SHMT2-217ENST00000555116 ALADP13716 330 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 FCARP24071 287 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 ZXDAP98168 799 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 CYP4F8P98187 520 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 APBA1Q02410 837 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 ARHGAP17Q68EM7 881 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 DPY19L2P1Q6NXN4 242 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 MTSS1LQ765P7 747 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 SLC44A3Q8N4M1 653 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 ASB16Q96NS5 453 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 GPR88Q9GZN0 384 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 NAT10Q9H0A0 1025 aaKnown RBP15.06■□□□□ 0
SHMT2-217ENST00000555116 UBE2TQ9NPD8 197 aaPredicted RBP15.06■□□□□ 0
SHMT2-217ENST00000555116 PCDHB4Q9Y5E5 795 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 HELZP42694 1942 aaKnown RBP15.06■□□□□ 0
SHMT2-217ENST00000555116 ESPNB1AK53 854 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 TNFRSF10BO14763 440 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 FAM200BP0CF97 657 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 ZNF132P52740 706 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 KCNMA1Q12791 1236 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 TDGQ13569 410 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 HS1BP3Q53T59 392 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 GPR158Q5T848 1215 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 GJB7Q6PEY0 223 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 TMEM270Q6UE05 265 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 CLEC20AQ6ZU45 233 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 DHX40Q8IX18 779 aaKnown RBP15.06■□□□□ 0
SHMT2-217ENST00000555116 GCNAQ96QF7 691 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 TASP1Q9H6P5 420 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 IL37Q9NZH6 218 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 LIMA1Q9UHB6 759 aaKnown RBP15.06■□□□□ 0
SHMT2-217ENST00000555116 CNTN6Q9UQ52 1028 aa15.06■□□□□ 0
SHMT2-217ENST00000555116 HHLA1C9JL84 531 aa15.05■□□□□ -0
SHMT2-217ENST00000555116 MAP3K7CLP57077 242 aa15.05■□□□□ -0
SHMT2-217ENST00000555116 ARHGAP15Q53QZ3 475 aa15.05■□□□□ -0
SHMT2-217ENST00000555116 TANGO2Q6ICL3 276 aa15.05■□□□□ -0
SHMT2-217ENST00000555116 NUP93Q8N1F7 819 aa15.05■□□□□ -0
SHMT2-217ENST00000555116 ZSCAN18Q8TBC5 510 aaPredicted RBP15.05■□□□□ -0
SHMT2-217ENST00000555116 EDAQ92838 391 aa15.05■□□□□ -0
SHMT2-217ENST00000555116 SMARCD2Q92925 531 aa15.05■□□□□ -0
SHMT2-217ENST00000555116 JAKMIP2Q96AA8 810 aa15.05■□□□□ -0
SHMT2-217ENST00000555116 KXD1Q9BQD3 176 aa15.05■□□□□ -0
SHMT2-217ENST00000555116 SLC46A2Q9BY10 475 aa15.05■□□□□ -0
SHMT2-217ENST00000555116 DUSP16Q9BY84 665 aa15.05■□□□□ -0
SHMT2-217ENST00000555116 VPS16Q9H269 839 aa15.05■□□□□ -0
SHMT2-217ENST00000555116 TRPV4Q9HBA0 871 aa15.05■□□□□ -0
SHMT2-217ENST00000555116 APEX2Q9UBZ4 518 aa15.05■□□□□ -0
SHMT2-217ENST00000555116 KIF26AQ9ULI4 1882 aaPredicted RBP15.04■□□□□ -0
SHMT2-217ENST00000555116 ECI2O75521 394 aa15.04■□□□□ -0
SHMT2-217ENST00000555116 PAEPP09466 180 aa15.04■□□□□ -0
SHMT2-217ENST00000555116 ZNF165P49910 485 aa15.04■□□□□ -0
SHMT2-217ENST00000555116 ENOSF1Q7L5Y1 443 aa15.04■□□□□ -0
SHMT2-217ENST00000555116 APTXQ7Z2E3 356 aaKnown RBP15.04■□□□□ -0
SHMT2-217ENST00000555116 RBBP8NLQ8NC74 664 aaPredicted RBP15.04■□□□□ -0
SHMT2-217ENST00000555116 ELSPBP1Q96BH3 223 aa15.04■□□□□ -0
SHMT2-217ENST00000555116 PLA2G2FQ9BZM2 168 aa15.04■□□□□ -0
SHMT2-217ENST00000555116 SLITRK6Q9H5Y7 841 aa15.04■□□□□ -0
SHMT2-217ENST00000555116 EHD2Q9NZN4 543 aa15.04■□□□□ -0
SHMT2-217ENST00000555116 AJAP1Q9UKB5 411 aaPredicted RBP15.04■□□□□ -0
SHMT2-217ENST00000555116 KIAA1257Q9ULG3 409 aa15.04■□□□□ -0
SHMT2-217ENST00000555116 NCANO14594 1321 aa15.04■□□□□ -0
SHMT2-217ENST00000555116 SOBPA7XYQ1 873 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 NARSO43776 548 aaKnown RBP15.03■□□□□ -0
SHMT2-217ENST00000555116 RTN3O95197 1032 aaPredicted RBP15.03■□□□□ -0
SHMT2-217ENST00000555116 VDRP11473 427 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 NPR3P17342 541 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 DDX6P26196 483 aaKnown RBP eCLIP15.03■□□□□ -03e-6■□□□□ 9.6
SHMT2-217ENST00000555116 WEE1P30291 646 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 COPB1P53618 953 aaKnown RBP15.03■□□□□ -0
SHMT2-217ENST00000555116 SLC5A3P53794 718 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 IQCB1Q15051 598 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 SGO2Q562F6 1265 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 MON1AQ86VX9 555 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 UBALD2Q8IYN6 164 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 SCAMP5Q8TAC9 235 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms