RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 PIGHQ14442 188 aaPredicted RBP12.4□□□□□ -0.43
XRCC3-208ENST00000554811 MORF4L2Q15014 288 aa12.4□□□□□ -0.43
XRCC3-208ENST00000554811 TMEM63BQ5T3F8 832 aa12.4□□□□□ -0.43
XRCC3-208ENST00000554811 FAM160B1Q5W0V3 765 aa12.4□□□□□ -0.43
XRCC3-208ENST00000554811 PLEKHA7Q6IQ23 1121 aa12.4□□□□□ -0.43
XRCC3-208ENST00000554811 CES3Q6UWW8 571 aa12.4□□□□□ -0.43
XRCC3-208ENST00000554811 ALYREFQ86V81 257 aaKnown RBP12.4□□□□□ -0.43
XRCC3-208ENST00000554811 CCHCR1Q8TD31 782 aa12.4□□□□□ -0.43
XRCC3-208ENST00000554811 SPATA33Q96N06 139 aa12.4□□□□□ -0.43
XRCC3-208ENST00000554811 ZNF570Q96NI8 536 aa12.4□□□□□ -0.43
XRCC3-208ENST00000554811 AGAP3Q96P47 875 aa12.4□□□□□ -0.43
XRCC3-208ENST00000554811 PACSIN3Q9UKS6 424 aa12.4□□□□□ -0.43
XRCC3-208ENST00000554811 SLX4Q8IY92 1834 aa12.4□□□□□ -0.43
XRCC3-208ENST00000554811 VTNP04004 478 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 NFICP08651 508 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 KRT7P08729 469 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 THOC5Q13769 683 aaKnown RBP12.39□□□□□ -0.43
XRCC3-208ENST00000554811 ZC3H12AQ5D1E8 599 aaKnown RBP12.39□□□□□ -0.43
XRCC3-208ENST00000554811 C16orf46Q6P387 395 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 CEP128Q6ZU80 1094 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 BZW1Q7L1Q6 419 aaKnown RBP12.39□□□□□ -0.43
XRCC3-208ENST00000554811 POU5F2Q8N7G0 328 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 NLRP7Q8WX94 980 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 CPT1BQ92523 772 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 CLPTM1LQ96KA5 538 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 THTPAQ9BU02 230 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 PORCNQ9H237 461 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 SLC17A6Q9P2U8 582 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 USP18Q9UMW8 372 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 LOC100653049A0A140TA62 436 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 IQANK1A0A1B0GTG1 560 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 B2RBV5 119 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 UGT1A9O60656 530 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 SMIM24O75264 130 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 LRCH4O75427 683 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 NPM3O75607 178 aaKnown RBP12.39□□□□□ -0.43
XRCC3-208ENST00000554811 KRT34O76011 436 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 KRT36O76013 467 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 ASMTLO95671 621 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 UBTFL6P0CB48 400 aaPredicted RBP12.39□□□□□ -0.43
XRCC3-208ENST00000554811 NAMPTP43490 491 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 TGFB2P61812 414 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 PDE1BQ01064 536 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 ZNF252P-AS1Q0IIN9 211 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 LAMTOR4Q0VGL1 99 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 KLF1Q13351 362 aaPredicted RBP12.39□□□□□ -0.43
XRCC3-208ENST00000554811 KPNB1Q14974 876 aaKnown RBP12.39□□□□□ -0.43
XRCC3-208ENST00000554811 CHI3L2Q15782 390 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 ATF7IP2Q5U623 682 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 ABHD15Q6UXT9 468 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 NIPA1Q7RTP0 329 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 PPFIBP2Q8ND30 876 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 PTPRN2Q92932 1015 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 LPIN3Q9BQK8 851 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 TMEM109Q9BVC6 243 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 UGT1A7Q9HAW7 530 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 UGT1A10Q9HAW8 530 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 UGT1A8Q9HAW9 530 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 ARL8BQ9NVJ2 186 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 CAPN9O14815 690 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 EDF1O60869 148 aaKnown RBP12.39□□□□□ -0.43
XRCC3-208ENST00000554811 LYPLA2O95372 231 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 LCP1P13796 627 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 ATP4AP20648 1035 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 KLRC2P26717 231 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 CDKN2BP42772 138 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 POLE2P56282 527 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 GPX6P59796 221 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 HSDL1Q3SXM5 330 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 FAM83AQ86UY5 434 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 NRAPQ86VF7 1730 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 SCUBE3Q8IX30 993 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 OR6B3Q8NGW1 331 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 DEPDC1BQ8WUY9 529 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 GRAMD1AQ96CP6 724 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 NAF1Q96HR8 494 aaKnown RBP12.39□□□□□ -0.43
XRCC3-208ENST00000554811 SMYD2Q9NRG4 433 aa12.39□□□□□ -0.43
XRCC3-208ENST00000554811 ZC3H11AO75152 810 aaKnown RBP eCLIP12.38□□□□□ -0.43
XRCC3-208ENST00000554811 NCF2P19878 526 aaPredicted RBP12.38□□□□□ -0.43
XRCC3-208ENST00000554811 PGM1P36871 562 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 EFCAB12Q6NXP0 572 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 DSTYKQ6XUX3 929 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 NUDCD3Q8IVD9 361 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 IGDCC3Q8IVU1 814 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 NDUFAF2Q8N183 169 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 RXFP2Q8WXD0 754 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 C17orf75Q9HAS0 396 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 PCDH9Q9HC56 1237 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 DLGAP2Q9P1A6 1054 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 AFG3L2Q9Y4W6 797 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 SNX9Q9Y5X1 595 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 A0A0B4J269 797 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 BHMG1C9JSJ3 638 aaPredicted RBP12.38□□□□□ -0.43
XRCC3-208ENST00000554811 FGFR1P11362 822 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 PTPRAP18433 802 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 GMPRP36959 345 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 SNRPFP62306 86 aaKnown RBP12.38□□□□□ -0.43
XRCC3-208ENST00000554811 FKBP1AP62942 108 aaKnown RBP12.38□□□□□ -0.43
XRCC3-208ENST00000554811 PDK4Q16654 411 aa12.38□□□□□ -0.43
XRCC3-208ENST00000554811 KLHL38Q2WGJ6 581 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms