RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 MAP3K7CLP57077 242 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 ROR1Q01973 937 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 PTP4A2Q12974 167 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 RAB33AQ14088 237 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 SMC1AQ14683 1233 aaKnown RBP15.15■□□□□ 0.02
SHOX2-206ENST00000554685 PTPN14Q15678 1187 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 CCDC142Q17RM4 750 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 DNAJC24Q6P3W2 148 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 TMEM110Q86TL2 294 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 PIGZQ86VD9 579 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 C3orf20Q8ND61 904 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 CEP295NLQ96MC4 621 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 ALS2CR12Q96Q35 445 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 CPXM1Q96SM3 734 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 C17orf80Q9BSJ5 609 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 EMILIN2Q9BXX0 1053 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 LRRC4Q9HBW1 653 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 NGRNQ9NPE2 291 aaKnown RBP15.15■□□□□ 0.02
SHOX2-206ENST00000554685 ENTPD7Q9NQZ7 604 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 CTTNBP2NLQ9P2B4 639 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 AFF4Q9UHB7 1163 aaKnown RBP15.15■□□□□ 0.02
SHOX2-206ENST00000554685 CYTH4Q9UIA0 394 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 IRAK3Q9Y616 596 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 KIAA1671Q9BY89 1806 aa15.15■□□□□ 0.02
SHOX2-206ENST00000554685 VWA8A3KMH1 1905 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 MTMR11A4FU01 709 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 E5RJQ4 531 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 SART1O43290 800 aaKnown RBP15.14■□□□□ 0.01
SHOX2-206ENST00000554685 MTA2O94776 668 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 FBXO21O94952 628 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 CXCL14O95715 111 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 ADH1AP07327 375 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 MYOGP15173 224 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 RRM1P23921 792 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 DNAJB2P25686 324 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 CA8P35219 290 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 GRIK1P39086 918 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 TUFMP49411 452 aaKnown RBP15.14■□□□□ 0.01
SHOX2-206ENST00000554685 RGS7P49802 495 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 RPL10AP62906 217 aaKnown RBP15.14■□□□□ 0.01
SHOX2-206ENST00000554685 PLEKHA7Q6IQ23 1121 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 PMF1Q6P1K2 205 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 CHRDL2Q6WN34 429 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 SIX6OS1Q8N1H7 587 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 C17orf53Q8N3J3 647 aaPredicted RBP15.14■□□□□ 0.01
SHOX2-206ENST00000554685 ZNF461Q8TAF7 563 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 SPPL3Q8TCT6 385 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 UBE2Q2Q8WVN8 375 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 POF1BQ8WVV4 589 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 C8orf48Q96LL4 319 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 SMOQ99835 787 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 TCF25Q9BQ70 676 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 CLSTN3Q9BQT9 956 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 SELENOOQ9BVL4 669 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 PBX4Q9BYU1 374 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 TLR9Q9NR96 1032 aa15.14■□□□□ 0.01
SHOX2-206ENST00000554685 YBX2Q9Y2T7 364 aaKnown RBP15.14■□□□□ 0.01
SHOX2-206ENST00000554685 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.13■□□□□ 0.01
SHOX2-206ENST00000554685 MACROD2A1Z1Q3 448 aa15.13■□□□□ 0.01
SHOX2-206ENST00000554685 WDR27A2RRH5 827 aa15.13■□□□□ 0.01
SHOX2-206ENST00000554685 LILRB3O75022 631 aa15.13■□□□□ 0.01
SHOX2-206ENST00000554685 ERBB2P04626 1255 aa15.13■□□□□ 0.01
SHOX2-206ENST00000554685 DESP17661 470 aa15.13■□□□□ 0.01
SHOX2-206ENST00000554685 ELF1P32519 619 aa15.13■□□□□ 0.01
SHOX2-206ENST00000554685 SMAD3P84022 425 aaKnown RBP15.13■□□□□ 0.01
SHOX2-206ENST00000554685 PPP2R2DQ66LE6 453 aa15.13■□□□□ 0.01
SHOX2-206ENST00000554685 OR6B2Q6IFH4 312 aa15.13■□□□□ 0.01
SHOX2-206ENST00000554685 RSPO2Q6UXX9 243 aaPredicted RBP15.13■□□□□ 0.01
SHOX2-206ENST00000554685 RNF19BQ6ZMZ0 732 aa15.13■□□□□ 0.01
SHOX2-206ENST00000554685 XYLT1Q86Y38 959 aa15.13■□□□□ 0.01
SHOX2-206ENST00000554685 DNAAF5Q86Y56 855 aa15.13■□□□□ 0.01
SHOX2-206ENST00000554685 SCN4BQ8IWT1 228 aa15.13■□□□□ 0.01
SHOX2-206ENST00000554685 SYCE1Q8N0S2 351 aa15.13■□□□□ 0.01
SHOX2-206ENST00000554685 TRIM58Q8NG06 486 aa15.13■□□□□ 0.01
SHOX2-206ENST00000554685 SLC35G2Q8TBE7 412 aa15.13■□□□□ 0.01
SHOX2-206ENST00000554685 ZNF564Q8TBZ8 553 aaPredicted RBP15.13■□□□□ 0.01
SHOX2-206ENST00000554685 ARHGEF26Q96DR7 871 aa15.13■□□□□ 0.01
SHOX2-206ENST00000554685 MCRS1Q96EZ8 462 aa15.13■□□□□ 0.01
SHOX2-206ENST00000554685 PGLYRP2Q96PD5 576 aa15.13■□□□□ 0.01
SHOX2-206ENST00000554685 NUP85Q9BW27 656 aa15.13■□□□□ 0.01
SHOX2-206ENST00000554685 LMAN2LQ9H0V9 348 aa15.13■□□□□ 0.01
SHOX2-206ENST00000554685 SLC28A3Q9HAS3 691 aa15.13■□□□□ 0.01
SHOX2-206ENST00000554685 TFR2Q9UP52 801 aa15.13■□□□□ 0.01
SHOX2-206ENST00000554685 A0A0U1RQJ8 604 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 F8VP50 259 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 H3BNC9 293 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 TULP2O00295 520 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 ATMINO43313 823 aaPredicted RBP15.12■□□□□ 0.01
SHOX2-206ENST00000554685 ABLIM3O94929 683 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 C1RP00736 705 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 HAPLN1P10915 354 aaPredicted RBP15.12■□□□□ 0.01
SHOX2-206ENST00000554685 ATF2P15336 505 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 RPL17P18621 184 aaKnown RBP15.12■□□□□ 0.01
SHOX2-206ENST00000554685 CYP2F1P24903 491 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 GPM6BQ13491 265 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 MGAT5BQ3V5L5 792 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 RAB41Q5JT25 222 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 CYP4A22Q5TCH4 519 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 DCUN1D2Q6PH85 259 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 SCML4Q8N228 414 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms