RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 MYLPFQ96A32 169 aa11.31□□□□□ -0.6
SHMT2-215ENST00000554656 SYT15Q9BQS2 421 aa11.31□□□□□ -0.6
SHMT2-215ENST00000554656 RTKNQ9BST9 563 aa11.31□□□□□ -0.6
SHMT2-215ENST00000554656 TRIM9Q9C026 710 aa11.31□□□□□ -0.6
SHMT2-215ENST00000554656 RBSNQ9H1K0 784 aa11.31□□□□□ -0.6
SHMT2-215ENST00000554656 TMEM30AQ9NV96 361 aa11.31□□□□□ -0.6
SHMT2-215ENST00000554656 HSPBP1Q9NZL4 362 aa11.31□□□□□ -0.6
SHMT2-215ENST00000554656 SERTAD1Q9UHV2 236 aa11.31□□□□□ -0.6
SHMT2-215ENST00000554656 WNT6Q9Y6F9 365 aa11.31□□□□□ -0.6
SHMT2-215ENST00000554656 NUP205Q92621 2012 aa11.31□□□□□ -0.6
SHMT2-215ENST00000554656 ANTXRLA6NF34 631 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 SOBPA7XYQ1 873 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 SLC30A4O14863 429 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 TGFB1I1O43294 461 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 RNF40O75150 1001 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 PCSK1P29120 753 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 CNR2P34972 360 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 GJA4P35212 333 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 MAGEA11P43364 429 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 LHX1P48742 406 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 USP46P62068 366 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 EHHADHQ08426 723 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 CCDC6Q16204 474 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 CSRP2Q16527 193 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 GAB4Q2WGN9 574 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 CT47A1Q5JQC4 288 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-215ENST00000554656 KBTBD6Q86V97 674 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 SPATA2LQ8IUW3 424 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-215ENST00000554656 SCN4BQ8IWT1 228 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 CCDC65Q8IXS2 484 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 ARL14EPQ8N8R7 260 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-215ENST00000554656 DHX58Q96C10 678 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 FUBP3Q96I24 572 aaKnown RBP eCLIP11.3□□□□□ -0.6
SHMT2-215ENST00000554656 HPDLQ96IR7 371 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 ANKRD36BP1Q96IX9 119 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 BPIFA3Q9BQP9 254 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 GTPBP4Q9BZE4 634 aaKnown RBP11.3□□□□□ -0.6
SHMT2-215ENST00000554656 NAT10Q9H0A0 1025 aaKnown RBP11.3□□□□□ -0.6
SHMT2-215ENST00000554656 TMEM206Q9H813 350 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 ECT2Q9H8V3 914 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 TRPC7Q9HCX4 862 aa11.3□□□□□ -0.6
SHMT2-215ENST00000554656 UXTQ9UBK9 157 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-215ENST00000554656 ABCA7Q8IZY2 2146 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 TRAV19A0A0A6YYK7 116 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-215ENST00000554656 ZNF233A6NK53 670 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 KIAA0391O15091 583 aaKnown RBP11.29□□□□□ -0.6
SHMT2-215ENST00000554656 EIF3DO15371 548 aaKnown RBP eCLIP11.29□□□□□ -0.6
SHMT2-215ENST00000554656 CKMP06732 381 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 SDHBP21912 280 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 WARSP23381 471 aaKnown RBP11.29□□□□□ -0.6
SHMT2-215ENST00000554656 BDNFP23560 247 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 CASP1P29466 404 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 GALK1P51570 392 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 CACNA2D1P54289 1103 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 GRSF1Q12849 480 aaKnown RBP eCLIP11.29□□□□□ -0.6
SHMT2-215ENST00000554656 PDGFRLQ15198 375 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 SF3A2Q15428 464 aaKnown RBP11.29□□□□□ -0.6
SHMT2-215ENST00000554656 EML3Q32P44 896 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 CNNM4Q6P4Q7 775 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 CEP68Q76N32 757 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 WDR49Q8IV35 697 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 NETO1Q8TDF5 533 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 SH3RF2Q8TEC5 729 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 OSCP1Q8WVF1 389 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 GAB3Q8WWW8 586 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 ANP32BQ92688 251 aaKnown RBP11.29□□□□□ -0.6
SHMT2-215ENST00000554656 SMARCE1Q969G3 411 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 CNTNAP3BQ96NU0 1288 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 GSDMAQ96QA5 445 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 HHIPQ96QV1 700 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 MRPL45Q9BRJ2 306 aaKnown RBP11.29□□□□□ -0.6
SHMT2-215ENST00000554656 CNTNAP3Q9BZ76 1288 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 LRRC27Q9C0I9 530 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 AGPAT3Q9NRZ7 376 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 RXFP3Q9NSD7 469 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 DUS2Q9NX74 493 aaKnown RBP11.29□□□□□ -0.6
SHMT2-215ENST00000554656 CDH9Q9ULB4 789 aa11.29□□□□□ -0.6
SHMT2-215ENST00000554656 TNRC6BQ9UPQ9 1833 aaKnown RBP11.28□□□□□ -0.6
SHMT2-215ENST00000554656 AXIN1O15169 862 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 RPP40O75818 363 aaKnown RBP11.28□□□□□ -0.6
SHMT2-215ENST00000554656 EPN2O95208 641 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 CST3P01034 146 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-215ENST00000554656 TNNC2P02585 160 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 PDGFRBP09619 1106 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 USP17L7P0C7H9 530 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 CHRM1P11229 460 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-215ENST00000554656 TCF3P15923 654 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 RAP1GAPP47736 663 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 ASIC1P78348 528 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 AMPD3Q01432 767 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 CYP24A1Q07973 514 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 MYO1EQ12965 1108 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 PNOCQ13519 176 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 DUOXA2Q1HG44 320 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 ANO6Q4KMQ2 910 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 FAM26FQ5R3K3 315 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 CC2D1AQ6P1N0 951 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-215ENST00000554656 DPH6Q7L8W6 267 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 TRAPPC11Q7Z392 1133 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms