RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 SLC8A1P32418 973 aa16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 CDH6P55285 790 aa16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 ATP11AP98196 1134 aa16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 Q3C1V9 767 aa16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 NOL9Q5SY16 702 aaKnown RBP16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 BBS12Q6ZW61 710 aa16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 POLNQ7Z5Q5 900 aa16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 ATP11CQ8NB49 1132 aa16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 MCF2LO15068 1137 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 AVILO75366 819 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 TXNP10599 105 aaKnown RBP16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 MBTD1Q05BQ5 628 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 SETDB1Q15047 1291 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 FAXCQ5TGI0 409 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 OR6B2Q6IFH4 312 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 KCNN1Q92952 543 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 PEBP4Q96S96 227 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 PLCD4Q9BRC7 762 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 PTPRHQ9HD43 1115 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 NPHS2Q9NP85 383 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 MGAMO43451 1857 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 A0A087WZ62 844 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 PRPF4O43172 522 aaKnown RBP eCLIP16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 B4GALT4O60513 344 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 VTNP04004 478 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 PHBP35232 272 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 PTPN7P35236 360 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 MSH2P43246 934 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 CCDC33Q8N5R6 958 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 NAT8LQ8N9F0 302 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 FDXACB1Q9BRP7 624 aaPredicted RBP16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 UBN1Q9NPG3 1134 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 HAO1Q9UJM8 370 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 DCTN4Q9UJW0 460 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 SMG5Q9UPR3 1016 aaKnown RBP16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 AKT3Q9Y243 479 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 KAT6AQ92794 2004 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 H7C0C1 242 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 PROZP22891 400 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 ATP5OP48047 213 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 RNF43Q68DV7 783 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 PCGF5Q86SE9 256 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 TDRPQ86YL5 185 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 IGDCC3Q8IVU1 814 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 PDIK1LQ8N165 341 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 C12orf29Q8N999 325 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 TMEM176AQ96HP8 235 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 TACO1Q9BSH4 297 aaKnown RBP16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 FZD8Q9H461 694 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 RNF19AQ9NV58 838 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 SLC17A7Q9P2U7 560 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 CHKBQ9Y259 395 aa16.42■□□□□ 0.22
ARHGEF40-203ENST00000554514 MCM3APO60318 1980 aa16.41■□□□□ 0.22
ARHGEF40-203ENST00000554514 SOCS7O14512 581 aa16.41■□□□□ 0.22
ARHGEF40-203ENST00000554514 YWHAGP61981 247 aaKnown RBP eCLIP16.41■□□□□ 0.22
ARHGEF40-203ENST00000554514 TTLL12Q14166 644 aaPredicted RBP16.41■□□□□ 0.22
ARHGEF40-203ENST00000554514 PDK4Q16654 411 aa16.41■□□□□ 0.22
ARHGEF40-203ENST00000554514 GRAMD1AQ96CP6 724 aa16.41■□□□□ 0.22
ARHGEF40-203ENST00000554514 LRRC37BQ96QE4 947 aa16.41■□□□□ 0.22
ARHGEF40-203ENST00000554514 HEY1Q9Y5J3 304 aa16.41■□□□□ 0.22
ARHGEF40-203ENST00000554514 TRUB2O95900 331 aaKnown RBP16.41■□□□□ 0.22
ARHGEF40-203ENST00000554514 NEFHP12036 1026 aa16.41■□□□□ 0.22
ARHGEF40-203ENST00000554514 ELK3P41970 407 aa16.41■□□□□ 0.22
ARHGEF40-203ENST00000554514 EFHC2Q5JST6 749 aa16.41■□□□□ 0.22
ARHGEF40-203ENST00000554514 MAP1SQ66K74 1059 aaPredicted RBP16.41■□□□□ 0.22
ARHGEF40-203ENST00000554514 TTC13Q8NBP0 860 aa16.41■□□□□ 0.22
ARHGEF40-203ENST00000554514 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.41■□□□□ 0.22
ARHGEF40-203ENST00000554514 TCP10LQ8TDR4 215 aa16.41■□□□□ 0.22
ARHGEF40-203ENST00000554514 CFAP36Q96G28 342 aa16.41■□□□□ 0.22
ARHGEF40-203ENST00000554514 LHX5Q9H2C1 402 aa16.41■□□□□ 0.22
ARHGEF40-203ENST00000554514 SLC24A2Q9UI40 661 aa16.41■□□□□ 0.22
ARHGEF40-203ENST00000554514 GINS2Q9Y248 185 aa16.41■□□□□ 0.22
ARHGEF40-203ENST00000554514 IGKV6-21A0A0C4DH24 114 aa16.4■□□□□ 0.22
ARHGEF40-203ENST00000554514 TYROBPO43914 113 aa16.4■□□□□ 0.22
ARHGEF40-203ENST00000554514 PDGFRAP16234 1089 aa16.4■□□□□ 0.22
ARHGEF40-203ENST00000554514 KCTD2Q14681 263 aa16.4■□□□□ 0.22
ARHGEF40-203ENST00000554514 OTOAQ7RTW8 1153 aa16.4■□□□□ 0.22
ARHGEF40-203ENST00000554514 ZNF75CPQ92670 426 aaPredicted RBP16.4■□□□□ 0.22
ARHGEF40-203ENST00000554514 N4BP2L2Q92802 583 aaPredicted RBP16.4■□□□□ 0.22
ARHGEF40-203ENST00000554514 HPDLQ96IR7 371 aa16.4■□□□□ 0.22
ARHGEF40-203ENST00000554514 FGD4Q96M96 766 aa16.4■□□□□ 0.22
ARHGEF40-203ENST00000554514 STARD13Q9Y3M8 1113 aa16.4■□□□□ 0.22
ARHGEF40-203ENST00000554514 E5RJQ4 531 aa16.4■□□□□ 0.22
ARHGEF40-203ENST00000554514 EDF1O60869 148 aaKnown RBP16.4■□□□□ 0.22
ARHGEF40-203ENST00000554514 CBX6O95503 412 aa16.4■□□□□ 0.22
ARHGEF40-203ENST00000554514 ROR1Q01973 937 aa16.4■□□□□ 0.22
ARHGEF40-203ENST00000554514 DPYSL3Q14195 570 aa16.4■□□□□ 0.22
ARHGEF40-203ENST00000554514 WLSQ5T9L3 541 aa16.4■□□□□ 0.22
ARHGEF40-203ENST00000554514 KIRREL3Q8IZU9 778 aa16.4■□□□□ 0.22
ARHGEF40-203ENST00000554514 RXFP2Q8WXD0 754 aa16.4■□□□□ 0.22
ARHGEF40-203ENST00000554514 MMP19Q99542 508 aa16.4■□□□□ 0.22
ARHGEF40-203ENST00000554514 BCO2Q9BYV7 579 aa16.4■□□□□ 0.22
ARHGEF40-203ENST00000554514 NGRNQ9NPE2 291 aaKnown RBP16.4■□□□□ 0.22
ARHGEF40-203ENST00000554514 APOC4-APOC2K7ER74 178 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 CILPO75339 1184 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 CNMDO75829 334 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 APOC2P02655 101 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 NDST1P52848 882 aa16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 RNASELQ05823 741 aaKnown RBP16.39■□□□□ 0.21
ARHGEF40-203ENST00000554514 KRT81Q14533 505 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms