RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 NSMFQ6X4W1 530 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 EPM2AIP1Q7L775 607 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 FGD2Q7Z6J4 655 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 PHLDB2Q86SQ0 1253 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 VPS36Q86VN1 386 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 SRRM1Q8IYB3 904 aaKnown RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 IL22RA1Q8N6P7 574 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 GALNT11Q8NCW6 608 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 GSTCDQ8NEC7 633 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 CYP2W1Q8TAV3 490 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 RIN3Q8TB24 985 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 CCHCR1Q8TD31 782 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 CKAP2Q8WWK9 683 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 KAT5Q92993 513 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 WNT8BQ93098 351 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 ERP27Q96DN0 273 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 BORCS6Q96GS4 357 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 NAF1Q96HR8 494 aaKnown RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 SYT15Q9BQS2 421 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 PLCD4Q9BRC7 762 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 HERPUD2Q9BSE4 406 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 SYT11Q9BT88 431 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 RTFDC1Q9BY42 306 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 LRRC27Q9C0I9 530 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 KLHL25Q9H0H3 589 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 MYLK2Q9H1R3 596 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 CARD9Q9H257 536 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 BHMT2Q9H2M3 363 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 PSTPIP2Q9H939 334 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 RXFP1Q9HBX9 757 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 SLCO1B3Q9NPD5 702 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 BATF3Q9NR55 127 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 CHST12Q9NRB3 414 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 SPATS2LQ9NUQ6 558 aaKnown RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 RGL1Q9NZL6 768 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 CTTNBP2NLQ9P2B4 639 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 SRP68Q9UHB9 627 aaKnown RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 TCEAL9Q9UHQ7 104 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 CORO1CQ9ULV4 474 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 TRAF3IP3Q9Y228 551 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 ARL2BPQ9Y2Y0 163 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 NUMBLQ9Y6R0 609 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 ZMYM2Q9UBW7 1377 aa2.71□□□□□ -1.97
PRPF39-207ENST00000554439 MYO3BQ8WXR4 1341 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 IRS2Q9Y4H2 1338 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 LOC100289279A0A1B0GTE1 492 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 TISP43B9A030 160 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 CLDN3O15551 220 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 GPR39O43194 453 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 CALUO43852 315 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 TOM1O60784 492 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 PEX11AO75192 247 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 ENTPD5O75356 428 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 PIAS1O75925 651 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 UNC5CO95185 931 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 TP53P04637 393 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 PABPC1P11940 636 aaKnown RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 BMP4P12644 408 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 RARGP13631 454 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 CCNB1P14635 433 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 FERP16591 822 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 TAC1P20366 129 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 TNFAIP3P21580 790 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 CTNNA2P26232 953 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 EPHB2P29323 1055 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 CHRNA3P32297 505 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 COILP38432 576 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 FMO5P49326 533 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 DGKGP49619 791 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 PEX5P50542 639 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 ERFP50548 548 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 ZNF131P52739 623 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 DRG2P55039 364 aaKnown RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 DLG4P78352 724 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 LACTBP83111 547 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 SPIRE1Q08AE8 756 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 DNAJC3Q13217 504 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 ZNF460Q14592 562 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 SIX1Q15475 284 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 ZNF568Q3ZCX4 644 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 PPM1JQ5JR12 505 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 SPDYCQ5MJ68 293 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 TMEM63BQ5T3F8 832 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 ZBTB37Q5TC79 503 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 DCAF15Q66K64 600 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 PKN3Q6P5Z2 889 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 RFWD3Q6PCD5 774 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 MIGA2Q7L4E1 593 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 TAOK1Q7L7X3 1001 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 UBE3DQ7Z6J8 389 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 LONP2Q86WA8 852 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 ARHGEF19Q8IW93 802 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 WDR75Q8IWA0 830 aaKnown RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 MRPL41Q8IXM3 137 aaKnown RBP2.71□□□□□ -1.98
PRPF39-207ENST00000554439 FAM186BQ8IYM0 893 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 CACTIN-AS1Q8N1I8 211 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 POU5F2Q8N7G0 328 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 CNBD1Q8NA66 436 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 FAM13CQ8NE31 585 aa2.71□□□□□ -1.98
PRPF39-207ENST00000554439 MORC4Q8TE76 937 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms