RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 PHTF1Q9UMS5 762 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 CDY1Q9Y6F8 540 aa6.12□□□□□ -1.43
SCFD1-211ENST00000554437 NXPH3O95157 252 aa6.11□□□□□ -1.43
SCFD1-211ENST00000554437 TYRP1P17643 537 aa6.11□□□□□ -1.43
SCFD1-211ENST00000554437 BTF3P20290 206 aaKnown RBP6.11□□□□□ -1.43
SCFD1-211ENST00000554437 IL1R2P27930 398 aa6.11□□□□□ -1.43
SCFD1-211ENST00000554437 CLCN2P51788 898 aa6.11□□□□□ -1.43
SCFD1-211ENST00000554437 AK2P54819 239 aa6.11□□□□□ -1.43
SCFD1-211ENST00000554437 SIM1P81133 766 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-211ENST00000554437 HTRA4P83105 476 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-211ENST00000554437 BMPR2Q13873 1038 aa6.11□□□□□ -1.43
SCFD1-211ENST00000554437 PTCHD3Q3KNS1 767 aa6.11□□□□□ -1.43
SCFD1-211ENST00000554437 TREML2Q5T2D2 321 aa6.11□□□□□ -1.43
SCFD1-211ENST00000554437 PCSK4Q6UW60 755 aa6.11□□□□□ -1.43
SCFD1-211ENST00000554437 OLFML1Q6UWY5 402 aa6.11□□□□□ -1.43
SCFD1-211ENST00000554437 ATP11CQ8NB49 1132 aa6.11□□□□□ -1.43
SCFD1-211ENST00000554437 GLG1Q92896 1179 aa6.11□□□□□ -1.43
SCFD1-211ENST00000554437 RFKQ969G6 155 aa6.11□□□□□ -1.43
SCFD1-211ENST00000554437 IQCDQ96DY2 449 aa6.11□□□□□ -1.43
SCFD1-211ENST00000554437 PDLIM2Q96JY6 352 aa6.11□□□□□ -1.43
SCFD1-211ENST00000554437 AGAP2Q99490 1192 aa6.11□□□□□ -1.43
SCFD1-211ENST00000554437 TRMT13Q9NUP7 481 aaKnown RBP6.11□□□□□ -1.43
SCFD1-211ENST00000554437 THAP12O43422 761 aa6.1□□□□□ -1.43
SCFD1-211ENST00000554437 RRP9O43818 475 aaKnown RBP6.1□□□□□ -1.43
SCFD1-211ENST00000554437 SRGAP2O75044 1071 aa6.1□□□□□ -1.43
SCFD1-211ENST00000554437 URI1O94763 535 aaPredicted RBP6.1□□□□□ -1.43
SCFD1-211ENST00000554437 INMTO95050 263 aa6.1□□□□□ -1.43
SCFD1-211ENST00000554437 ERBB2P04626 1255 aa6.1□□□□□ -1.43
SCFD1-211ENST00000554437 TPH1P17752 444 aa6.1□□□□□ -1.43
SCFD1-211ENST00000554437 ALDH9A1P49189 494 aa6.1□□□□□ -1.43
SCFD1-211ENST00000554437 RARRES1P49788 294 aa6.1□□□□□ -1.43
SCFD1-211ENST00000554437 CPT1AP50416 773 aa6.1□□□□□ -1.43
SCFD1-211ENST00000554437 NPY5RQ15761 445 aa6.1□□□□□ -1.43
SCFD1-211ENST00000554437 PLAC9Q5JTB6 97 aa6.1□□□□□ -1.43
SCFD1-211ENST00000554437 ABRAQ8N0Z2 381 aa6.1□□□□□ -1.43
SCFD1-211ENST00000554437 DNAJB14Q8TBM8 379 aa6.1□□□□□ -1.43
SCFD1-211ENST00000554437 CAGE1Q8TC20 777 aa6.1□□□□□ -1.43
SCFD1-211ENST00000554437 TNIP3Q96KP6 325 aa6.1□□□□□ -1.43
SCFD1-211ENST00000554437 DHX36Q9H2U1 1008 aaKnown RBP6.1□□□□□ -1.43
SCFD1-211ENST00000554437 DNMT3BQ9UBC3 853 aaKnown RBP6.1□□□□□ -1.43
SCFD1-211ENST00000554437 ST3GAL5Q9UNP4 418 aa6.1□□□□□ -1.43
SCFD1-211ENST00000554437 SNX14Q9Y5W7 946 aa6.1□□□□□ -1.43
SCFD1-211ENST00000554437 CCDC194A0A1B0GVG4 234 aa6.09□□□□□ -1.43
SCFD1-211ENST00000554437 A1L4Q6 167 aa6.09□□□□□ -1.43
SCFD1-211ENST00000554437 LINC00473A8K010 186 aa6.09□□□□□ -1.43
SCFD1-211ENST00000554437 PIAS2O75928 621 aa6.09□□□□□ -1.43
SCFD1-211ENST00000554437 TTLL1O95922 423 aa6.09□□□□□ -1.43
SCFD1-211ENST00000554437 FESP07332 822 aa6.09□□□□□ -1.43
SCFD1-211ENST00000554437 TSHRP16473 764 aa6.09□□□□□ -1.43
SCFD1-211ENST00000554437 PRKAR1BP31321 381 aa6.09□□□□□ -1.43
SCFD1-211ENST00000554437 LIPAP38571 399 aa6.09□□□□□ -1.43
SCFD1-211ENST00000554437 ATXN1P54253 815 aaKnown RBP6.09□□□□□ -1.43
SCFD1-211ENST00000554437 PDE1AP54750 535 aa6.09□□□□□ -1.43
SCFD1-211ENST00000554437 CCNIQ14094 377 aa6.09□□□□□ -1.43
SCFD1-211ENST00000554437 LY6KQ17RY6 165 aa6.09□□□□□ -1.43
SCFD1-211ENST00000554437 CERCAMQ5T4B2 595 aa6.09□□□□□ -1.43
SCFD1-211ENST00000554437 RRAGBQ5VZM2 374 aa6.09□□□□□ -1.43
SCFD1-211ENST00000554437 FCRL6Q6DN72 434 aa6.09□□□□□ -1.43
SCFD1-211ENST00000554437 DPP9Q86TI2 863 aa6.09□□□□□ -1.43
SCFD1-211ENST00000554437 IZUMO1Q8IYV9 350 aa6.09□□□□□ -1.43
SCFD1-211ENST00000554437 R3HDM4Q96D70 268 aa6.09□□□□□ -1.43
SCFD1-211ENST00000554437 CCDC138Q96M89 665 aa6.09□□□□□ -1.43
SCFD1-211ENST00000554437 STARD7Q9NQZ5 370 aa6.09□□□□□ -1.43
SCFD1-211ENST00000554437 ARHGEF3Q9NR81 526 aa6.09□□□□□ -1.43
SCFD1-211ENST00000554437 RGS17Q9UGC6 210 aaPredicted RBP6.09□□□□□ -1.43
SCFD1-211ENST00000554437 TLK1Q9UKI8 766 aa6.09□□□□□ -1.43
SCFD1-211ENST00000554437 RASA4BC9J798 803 aa6.08□□□□□ -1.44
SCFD1-211ENST00000554437 APOL1O14791 398 aa6.08□□□□□ -1.44
SCFD1-211ENST00000554437 MGST3O14880 152 aa6.08□□□□□ -1.44
SCFD1-211ENST00000554437 KIAA0355O15063 1070 aa6.08□□□□□ -1.44
SCFD1-211ENST00000554437 RASA4O43374 803 aa6.08□□□□□ -1.44
SCFD1-211ENST00000554437 ONECUT2O95948 504 aa6.08□□□□□ -1.44
SCFD1-211ENST00000554437 LMNAP02545 664 aaKnown RBP6.08□□□□□ -1.44
SCFD1-211ENST00000554437 IL6RP08887 468 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-211ENST00000554437 IFIT2P09913 472 aaKnown RBP6.08□□□□□ -1.44
SCFD1-211ENST00000554437 NDUFB7P17568 137 aa6.08□□□□□ -1.44
SCFD1-211ENST00000554437 TNFSF4P23510 183 aa6.08□□□□□ -1.44
SCFD1-211ENST00000554437 TM4SF4P48230 202 aa6.08□□□□□ -1.44
SCFD1-211ENST00000554437 ALDH5A1P51649 535 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-211ENST00000554437 STK3Q13188 491 aa6.08□□□□□ -1.44
SCFD1-211ENST00000554437 ZNF750Q32MQ0 723 aa6.08□□□□□ -1.44
SCFD1-211ENST00000554437 PRR16Q569H4 304 aa6.08□□□□□ -1.44
SCFD1-211ENST00000554437 SYCP2LQ5T4T6 812 aa6.08□□□□□ -1.44
SCFD1-211ENST00000554437 PLAG1Q6DJT9 500 aa6.08□□□□□ -1.44
SCFD1-211ENST00000554437 ZNF551Q7Z340 670 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-211ENST00000554437 RNF152Q8N8N0 203 aa6.08□□□□□ -1.44
SCFD1-211ENST00000554437 XAGE5Q8WWM1 108 aa6.08□□□□□ -1.44
SCFD1-211ENST00000554437 RIPOR3Q96MK2 946 aa6.08□□□□□ -1.44
SCFD1-211ENST00000554437 MYD88Q99836 296 aa6.08□□□□□ -1.44
SCFD1-211ENST00000554437 C17orf80Q9BSJ5 609 aa6.08□□□□□ -1.44
SCFD1-211ENST00000554437 DUSP26Q9BV47 211 aa6.08□□□□□ -1.44
SCFD1-211ENST00000554437 TRIM5Q9C035 493 aa6.08□□□□□ -1.44
SCFD1-211ENST00000554437 CHST12Q9NRB3 414 aa6.08□□□□□ -1.44
SCFD1-211ENST00000554437 CCNL1Q9UK58 526 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-211ENST00000554437 AQP7P3A6NL99 342 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 SUV39H1O43463 412 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 A1BGP04217 495 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 ELFN1P0C7U0 828 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 EBLN1P0CF75 366 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 FGFR2P21802 821 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms