RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 GAP43P17677 238 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 TFEBP19484 476 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 ALAS2P22557 587 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 RPS6KB1P23443 525 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 ATP5F1P24539 256 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 GDI1P31150 447 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 HNF1BP35680 557 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 LIFRP42702 1097 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 GRK6P43250 576 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 TUFMP49411 452 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 VPS41P49754 854 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 PLTPP55058 493 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 RPS6P62753 249 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 NHLH1Q02575 133 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 RELQ04864 619 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 TRPC3Q13507 836 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 SCARB2Q14108 478 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 PDIA5Q14554 519 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 MBTPS1Q14703 1052 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 SLC9A5Q14940 896 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 PCBP1Q15365 356 aaKnown RBP eCLIP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 PCBP2Q15366 365 aaKnown RBP eCLIP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 TERF2Q15554 542 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 TUSC1Q2TAM9 212 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 SKOR2Q2VWA4 1001 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 KRT71Q3SY84 523 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 BOLA3Q53S33 107 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 RPS26P11Q5JNZ5 115 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 NKAPLQ5M9Q1 402 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CELF3Q5SZQ8 465 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 GPR158Q5T848 1215 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 RNF20Q5VTR2 975 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CXorf57Q6NSI4 855 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 WDR73Q6P4I2 378 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 SLC22A25Q6T423 547 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 LUZP1Q86V48 1076 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 TMTC1Q8IUR5 882 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 LURAP1LQ8IV03 231 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 GJD3Q8N144 294 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 LRRC71Q8N4P6 559 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 ERMNQ8TAM6 284 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 KRT35Q92764 455 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 LRRC45Q96CN5 670 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 MSLNLQ96KJ4 702 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 MFSD14AQ96MC6 490 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 NAP1L3Q99457 506 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CDCA3Q99618 268 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 C16orf70Q9BSU1 422 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CCDC106Q9BWC9 280 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 WDR12Q9GZL7 423 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 NAPBQ9H115 298 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 RNF41Q9H4P4 317 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 ZWILCHQ9H900 591 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CD320Q9NPF0 282 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 GPRC5BQ9NZH0 403 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 MRPL11Q9Y3B7 192 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 ZNF711Q9Y462 761 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 RANBP2P49792 3224 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 ITIH6Q6UXX5 1313 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 KDM3AQ9Y4C1 1321 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CHD9Q3L8U1 2897 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 KAT6AQ92794 2004 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 UQCRHLA0A096LP55 91 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 ARHGAP10A1A4S6 786 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 MBLAC1A4D2B0 266 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 A6NLC8 198 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CAPN14A8MX76 684 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 B4E171 279 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 H7C0S8 307 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 TPP1O14773 563 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 NEBLO76041 1014 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 ZIC2O95409 532 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CHGBP05060 677 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 UQCRHP07919 91 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 RHOXF2BP0C7M4 288 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 TXNP10599 105 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CYP2C9P11712 490 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CD46P15529 392 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 ENDOUP21128 410 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 IGFBP4P22692 258 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 ADSLP30566 484 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 MAP2K3P46734 347 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 GCGRP47871 477 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 TKTL1P51854 596 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 ATXN1P54253 815 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 MYL6P60660 151 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 GPR85P60893 370 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 DCAF7P61962 342 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 TFF2Q03403 129 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 UBE3AQ05086 875 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 ZBTB16Q05516 673 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CUL2Q13617 745 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 RBBP5Q15291 538 aaKnown RBP2.88□□□□□ -1.95
PRPF39-206ENST00000554429 STXBP2Q15833 593 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 ZNF674Q2M3X9 581 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 CCDC38Q502W7 563 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 HS1BP3Q53T59 392 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 TMEM63BQ5T3F8 832 aa2.88□□□□□ -1.95
PRPF39-206ENST00000554429 FBXW10Q5XX13 1052 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms