RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 LUZP4Q9P127 313 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 POLG2Q9UHN1 485 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 PHTF1Q9UMS5 762 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 HDAC5Q9UQL6 1122 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 EXOC6BQ9Y2D4 811 aa5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 LRRFIP2Q9Y608 721 aaKnown RBP5.9□□□□□ -1.46
MTHFD1-206ENST00000554353 ATRNL1Q5VV63 1379 aa5.9□□□□□ -1.47
MTHFD1-206ENST00000554353 BCORQ6W2J9 1755 aa5.9□□□□□ -1.47
MTHFD1-206ENST00000554353 ADAMTS20P59510 1910 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 ARFGEF2Q9Y6D5 1785 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 FSD2A1L4K1 749 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 GLTPD2A6NH11 291 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 CAPN8A6NHC0 703 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 CXorf49A8MYA2 514 aaPredicted RBP5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 TEX33O43247 280 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 PIP5K1CO60331 668 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 NBNO60934 754 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 ARIH2O95376 493 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 VEGFAP15692 232 aaPredicted RBP5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 RHCEP18577 417 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 ATP5JP18859 108 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 RPS19P39019 145 aaKnown RBP5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 PIP4K2AP48426 406 aaPredicted RBP5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 GEMIN4P57678 1058 aaKnown RBP5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 RAP2BP61225 183 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 RHDQ02161 417 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 SNAPC2Q13487 334 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 SIM2Q14190 667 aaPredicted RBP5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 ATP2B3Q16720 1220 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 KIAA0753Q2KHM9 967 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 GLIPR1L2Q4G1C9 344 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 ANO6Q4KMQ2 910 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 PRR5LQ6MZQ0 368 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 XRRA1Q6P2D8 792 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 CLEC17AQ6ZS10 378 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 TOGARAM2Q6ZUX3 1019 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 ZNF354CQ86Y25 554 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 PLBD2Q8NHP8 589 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 TNPO1Q92973 898 aaKnown RBP5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 GJA10Q969M2 543 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 MTFMTQ96DP5 389 aaKnown RBP5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 ZNF512Q96ME7 567 aaPredicted RBP5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 MYOCQ99972 504 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 MRI1Q9BV20 369 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 BRIP1Q9BX63 1249 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 LRRCC1Q9C099 1032 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 PLCB1Q9NQ66 1216 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 PNPOQ9NVS9 261 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 PPP4R1LQ9P1A2 415 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 FEZ2Q9UHY8 353 aaPredicted RBP5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 NUP98P52948 1817 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 AOX1Q06278 1338 aa5.89□□□□□ -1.47
MTHFD1-206ENST00000554353 KLRG2A4D1S0 409 aaPredicted RBP5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 KRTAP9-7A8MTY7 169 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 KIAA0391O15091 583 aaKnown RBP5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 CAMTA2O94983 1202 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 ZBED1O96006 694 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 CD1AP06126 327 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 UBTFL1P0CB47 393 aaPredicted RBP5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 TYRP14679 529 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 EIF2S2P20042 333 aaKnown RBP5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 MX1P20591 662 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 CHMLP26374 656 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 MSX2P35548 267 aaPredicted RBP5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 HALP42357 657 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 RAB1AP62820 205 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 PLS1Q14651 629 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 TBC1D10BQ4KMP7 808 aaPredicted RBP5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 FLYWCH1Q4VC44 716 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 CCDC93Q567U6 631 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 TSHZ3Q63HK5 1081 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 ANKS6Q68DC2 871 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 TTLL5Q6EMB2 1281 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 PPP1R42Q7Z4L9 355 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 FRMD5Q7Z6J6 570 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 SIAH1Q8IUQ4 282 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 TTC30BQ8N4P2 665 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 DCBLD1Q8N8Z6 715 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 CNBD1Q8NA66 436 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 PPHLN1Q8NEY8 458 aaKnown RBP5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 SLC35B2Q8TB61 432 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 DNAAF4Q8WXU2 420 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 SCLT1Q96NL6 688 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 NT5C1BQ96P26 610 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 CPPED1Q9BRF8 314 aaPredicted RBP5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 C11orf54Q9H0W9 315 aaPredicted RBP5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 XYLT2Q9H1B5 865 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 KCNH6Q9H252 994 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 PARD6AQ9NPB6 346 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 DDX21Q9NR30 783 aaKnown RBP eCLIP5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 PLA2G3Q9NZ20 509 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 CPA4Q9UI42 421 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 HDAC9Q9UKV0 1011 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 PCDHGB6Q9Y5F9 930 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 PCDHA1Q9Y5I3 950 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 USP16Q9Y5T5 823 aa5.88□□□□□ -1.47
MTHFD1-206ENST00000554353 TCRBV7S2A1N4TA0A589 114 aa5.87□□□□□ -1.47
MTHFD1-206ENST00000554353 PI4KAP2A4QPH2 592 aa5.87□□□□□ -1.47
MTHFD1-206ENST00000554353 PRRT4C9JH25 899 aa5.87□□□□□ -1.47
MTHFD1-206ENST00000554353 CLGNO14967 610 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms