RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 KIAA1217Q5T5P2 1943 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 TRBV23-1A0A0A0MS06 115 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 KRTAP23-1A1A580 65 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 CCDC66A2RUB6 948 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 ASB14A6NK59 587 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 CCER2I3L3R5 266 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 GSTA4O15217 222 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 PLA2G6O60733 806 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 TBX10O75333 385 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 CABYRO75952 493 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 GJB5O95377 273 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 ICAM1P05362 532 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 MMP3P08254 477 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 IFIT2P09913 472 aaKnown RBP3.7□□□□□ -1.82
SLIRP-202ENST00000553981 GOLGA8HP0CJ92 632 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 SNHG28P0DPA3 235 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 PDHBP11177 359 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 KCNA5P22460 613 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 DNAJB1P25685 340 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 CALML3P27482 149 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 COPB2P35606 906 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 SLC1A4P43007 532 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 DNM2P50570 870 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 STAT2P52630 851 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 RPS6P62753 249 aaKnown RBP3.7□□□□□ -1.82
SLIRP-202ENST00000553981 SUMO1P63165 101 aaKnown RBP3.7□□□□□ -1.82
SLIRP-202ENST00000553981 HTRA4P83105 476 aaPredicted RBP3.7□□□□□ -1.82
SLIRP-202ENST00000553981 RBL2Q08999 1139 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 HYAL1Q12794 435 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 PTGISQ16647 500 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 TM4SF20Q53R12 229 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 FAM47CQ5HY64 1035 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 FAM209AQ5JX71 171 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 SYDE2Q5VT97 1194 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 ADGRD2Q7Z7M1 963 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 ZNF589Q86UQ0 364 aaPredicted RBP3.7□□□□□ -1.82
SLIRP-202ENST00000553981 SESTD1Q86VW0 696 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 ERC1Q8IUD2 1116 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 RPAP2Q8IXW5 612 aaPredicted RBP3.7□□□□□ -1.82
SLIRP-202ENST00000553981 RPUSD2Q8IZ73 545 aaKnown RBP3.7□□□□□ -1.82
SLIRP-202ENST00000553981 DBF4BQ8NFT6 615 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 IL31RAQ8NI17 732 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 WDR48Q8TAF3 677 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 PHOSPHO2Q8TCD6 241 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 SNX27Q96L92 541 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 CDC6Q99741 560 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 TMEM47Q9BQJ4 181 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 MTG1Q9BT17 334 aaPredicted RBP3.7□□□□□ -1.82
SLIRP-202ENST00000553981 UBA5Q9GZZ9 404 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 SMOC2Q9H3U7 446 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 SH2D4AQ9H788 454 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 VTA1Q9NP79 307 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 SLC2A4RGQ9NR83 387 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 PARPBPQ9NWS1 579 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 MUTYHQ9UIF7 546 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 CDH22Q9UJ99 828 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 CCPG1Q9ULG6 757 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 COG5Q9UP83 839 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 REXO2Q9Y3B8 237 aaKnown RBP3.7□□□□□ -1.82
SLIRP-202ENST00000553981 MSRB2Q9Y3D2 182 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 PCDHA9Q9Y5H5 950 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 DMRT1Q9Y5R6 373 aa3.7□□□□□ -1.82
SLIRP-202ENST00000553981 PLXNA4Q9HCM2 1894 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 A0A0D9SFI3 127 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 GRM6O15303 877 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 MBTPS2O43462 519 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 RAB11FIP3O75154 756 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 CSPG5O95196 566 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 CRTAMO95727 393 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 GLP2RO95838 553 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 PDGFBP01127 241 aaPredicted RBP3.69□□□□□ -1.82
SLIRP-202ENST00000553981 ZNF286BP0CG31 522 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 NAT1P18440 290 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 KRT4P19013 534 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 HOXC8P31273 242 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 GATMP50440 423 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 VCPP55072 806 aaKnown RBP3.69□□□□□ -1.82
SLIRP-202ENST00000553981 RIN1Q13671 783 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 CLUL1Q15846 466 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 TKFCQ3LXA3 575 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 HSDL1Q3SXM5 330 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 EPC2Q52LR7 807 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 FSTL4Q6MZW2 842 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 NFRKBQ6P4R8 1299 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 GIMAP6Q6P9H5 292 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 TMED8Q6PL24 325 aaPredicted RBP3.69□□□□□ -1.82
SLIRP-202ENST00000553981 Q6ZPA2 131 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 SEPT14Q6ZU15 432 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 LRRC8DQ7L1W4 858 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 RTN4RL1Q86UN2 441 aaPredicted RBP3.69□□□□□ -1.82
SLIRP-202ENST00000553981 FAM160B2Q86V87 743 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 TBC1D10CQ8IV04 446 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 NOSTRINQ8IVI9 506 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 FTSJ3Q8IY81 847 aaKnown RBP3.69□□□□□ -1.82
SLIRP-202ENST00000553981 ZNF444Q8N0Y2 327 aaPredicted RBP3.69□□□□□ -1.82
SLIRP-202ENST00000553981 BCL6BQ8N143 479 aaPredicted RBP3.69□□□□□ -1.82
SLIRP-202ENST00000553981 VN1R2Q8NFZ6 395 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 ASB15Q8WXK1 588 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 ZG16BQ96DA0 208 aa3.69□□□□□ -1.82
SLIRP-202ENST00000553981 FAM227BQ96M60 508 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms