RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 KRT26Q7Z3Y9 468 aa3.01□□□□□ -1.93
SRP54-204ENST00000553923 BCDIN3DQ7Z5W3 292 aaKnown RBP3.01□□□□□ -1.93
SRP54-204ENST00000553923 PELI3Q8N2H9 469 aa3.01□□□□□ -1.93
SRP54-204ENST00000553923 ZNF548Q8NEK5 533 aaPredicted RBP3.01□□□□□ -1.93
SRP54-204ENST00000553923 ZCRB1Q8TBF4 217 aaKnown RBP3.01□□□□□ -1.93
SRP54-204ENST00000553923 FAXDC2Q96IV6 333 aa3.01□□□□□ -1.93
SRP54-204ENST00000553923 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
SRP54-204ENST00000553923 CSF1RP07333 972 aa3□□□□□ -1.93
SRP54-204ENST00000553923 ATXN1LP0C7T5 689 aaKnown RBP3□□□□□ -1.93
SRP54-204ENST00000553923 KRTAP5-9P26371 169 aa3□□□□□ -1.93
SRP54-204ENST00000553923 SMARCA1P28370 1054 aa3□□□□□ -1.93
SRP54-204ENST00000553923 IARSP41252 1262 aaKnown RBP3□□□□□ -1.93
SRP54-204ENST00000553923 TPTEP56180 551 aa3□□□□□ -1.93
SRP54-204ENST00000553923 LILRA4P59901 499 aa3□□□□□ -1.93
SRP54-204ENST00000553923 KIF23Q02241 960 aaPredicted RBP3□□□□□ -1.93
SRP54-204ENST00000553923 NPY5RQ15761 445 aa3□□□□□ -1.93
SRP54-204ENST00000553923 CYP1B1Q16678 543 aa3□□□□□ -1.93
SRP54-204ENST00000553923 LONRF3Q496Y0 759 aa3□□□□□ -1.93
SRP54-204ENST00000553923 ZNF628Q5EBL2 1059 aa3□□□□□ -1.93
SRP54-204ENST00000553923 L1TD1Q5T7N2 865 aaKnown RBP3□□□□□ -1.93
SRP54-204ENST00000553923 ARHGAP40Q5TG30 622 aa3□□□□□ -1.93
SRP54-204ENST00000553923 PPP1R3BQ86XI6 285 aa3□□□□□ -1.93
SRP54-204ENST00000553923 SLC15A3Q8IY34 581 aa3□□□□□ -1.93
SRP54-204ENST00000553923 CNTD1Q8N815 330 aa3□□□□□ -1.93
SRP54-204ENST00000553923 C3orf20Q8ND61 904 aa3□□□□□ -1.93
SRP54-204ENST00000553923 ADAMTS18Q8TE60 1221 aa3□□□□□ -1.93
SRP54-204ENST00000553923 XAGE5Q8WWM1 108 aa3□□□□□ -1.93
SRP54-204ENST00000553923 MAP4K1Q92918 833 aa3□□□□□ -1.93
SRP54-204ENST00000553923 CIPCQ9C0C6 399 aa3□□□□□ -1.93
SRP54-204ENST00000553923 TTYH3Q9C0H2 523 aa3□□□□□ -1.93
SRP54-204ENST00000553923 METTL14Q9HCE5 456 aaKnown RBP3□□□□□ -1.93
SRP54-204ENST00000553923 POT1Q9NUX5 634 aa3□□□□□ -1.93
SRP54-204ENST00000553923 TMEM184CQ9NVA4 438 aa3□□□□□ -1.93
SRP54-204ENST00000553923 MKS1Q9NXB0 559 aa3□□□□□ -1.93
SRP54-204ENST00000553923 NDRG4Q9ULP0 352 aaKnown RBP3□□□□□ -1.93
SRP54-204ENST00000553923 PCDHA3Q9Y5H8 950 aa3□□□□□ -1.93
SRP54-204ENST00000553923 COL4A3BPQ9Y5P4 624 aa3□□□□□ -1.93
SRP54-204ENST00000553923 EME2A4GXA9 379 aaPredicted RBP2.99□□□□□ -1.93
SRP54-204ENST00000553923 KLHL33A6NCF5 533 aa2.99□□□□□ -1.93
SRP54-204ENST00000553923 C4orf47A7E2U8 309 aa2.99□□□□□ -1.93
SRP54-204ENST00000553923 BTBD19C9JJ37 291 aa2.99□□□□□ -1.93
SRP54-204ENST00000553923 FGF2P09038 288 aa2.99□□□□□ -1.93
SRP54-204ENST00000553923 PXNP49023 591 aaPredicted RBP2.99□□□□□ -1.93
SRP54-204ENST00000553923 KRT85P78386 507 aa2.99□□□□□ -1.93
SRP54-204ENST00000553923 CFHR1Q03591 330 aa2.99□□□□□ -1.93
SRP54-204ENST00000553923 ACAP2Q15057 778 aa2.99□□□□□ -1.93
SRP54-204ENST00000553923 RGS7BPQ6MZT1 257 aaPredicted RBP2.99□□□□□ -1.93
SRP54-204ENST00000553923 SERPINA13PQ6UXR4 307 aa2.99□□□□□ -1.93
SRP54-204ENST00000553923 ATL2Q8NHH9 583 aa2.99□□□□□ -1.93
SRP54-204ENST00000553923 TNPO1Q92973 898 aaKnown RBP2.99□□□□□ -1.93
SRP54-204ENST00000553923 CUL5Q93034 780 aa2.99□□□□□ -1.93
SRP54-204ENST00000553923 TEKT5Q96M29 485 aa2.99□□□□□ -1.93
SRP54-204ENST00000553923 WDCPQ9H6R7 721 aa2.99□□□□□ -1.93
SRP54-204ENST00000553923 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.99□□□□□ -1.93
SRP54-204ENST00000553923 G3BP2Q9UN86 482 aaKnown RBP2.99□□□□□ -1.93
SRP54-204ENST00000553923 POLHQ9Y253 713 aa2.99□□□□□ -1.93
SRP54-204ENST00000553923 NOP58Q9Y2X3 529 aaKnown RBP2.99□□□□□ -1.93
SRP54-204ENST00000553923 FER1L4A9Z1Z3 1794 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 B4DGG1 531 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 TMEM232C9JQI7 657 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 H3BNX3 289 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 ARIH2O95376 493 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 PARNO95453 639 aaKnown RBP2.98□□□□□ -1.93
SRP54-204ENST00000553923 AHSGP02765 367 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 GNAI2P04899 355 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 DLDP09622 509 aaKnown RBP2.98□□□□□ -1.93
SRP54-204ENST00000553923 CYP19A1P11511 503 aaPredicted RBP2.98□□□□□ -1.93
SRP54-204ENST00000553923 TNFRSF1BP20333 461 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 HK3P52790 923 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 PSG6Q00889 435 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 RHDQ02161 417 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 ZNF91Q05481 1191 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 E2F2Q14209 437 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 IQCB1Q15051 598 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 SEC23BQ15437 767 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 HSP90AB2PQ58FF8 381 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 LIX1LQ8IVB5 337 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 ADHFE1Q8IWW8 467 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 DCP1BQ8IZD4 617 aaKnown RBP2.98□□□□□ -1.93
SRP54-204ENST00000553923 ARFGAP1Q8N6T3 406 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 ZFYVE19Q96K21 471 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 PUS7LQ9H0K6 701 aaKnown RBP2.98□□□□□ -1.93
SRP54-204ENST00000553923 FAM234AQ9H0X4 552 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 ZBTB40Q9NUA8 1239 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 MDFICQ9P1T7 246 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 SQORQ9Y6N5 450 aa2.98□□□□□ -1.93
SRP54-204ENST00000553923 hCG_1984214I3L0E3 225 aa2.97□□□□□ -1.93
SRP54-204ENST00000553923 TPD52L2O43399 206 aaKnown RBP2.97□□□□□ -1.93
SRP54-204ENST00000553923 PEX14O75381 377 aa2.97□□□□□ -1.93
SRP54-204ENST00000553923 MT-CO1P00395 513 aa2.97□□□□□ -1.93
SRP54-204ENST00000553923 FGAP02671 866 aa2.97□□□□□ -1.93
SRP54-204ENST00000553923 S100BP04271 92 aaPredicted RBP2.97□□□□□ -1.93
SRP54-204ENST00000553923 PRKCBP05771 671 aa2.97□□□□□ -1.93
SRP54-204ENST00000553923 CTSAP10619 480 aa2.97□□□□□ -1.93
SRP54-204ENST00000553923 MYCLP12524 364 aaPredicted RBP2.97□□□□□ -1.93
SRP54-204ENST00000553923 ME1P48163 572 aa2.97□□□□□ -1.93
SRP54-204ENST00000553923 ADKP55263 362 aaKnown RBP2.97□□□□□ -1.93
SRP54-204ENST00000553923 E2F1Q01094 437 aa2.97□□□□□ -1.93
SRP54-204ENST00000553923 NOGQ13253 232 aa2.97□□□□□ -1.93
SRP54-204ENST00000553923 PCBP2Q15366 365 aaKnown RBP eCLIP2.97□□□□□ -1.933e-6■■■■□ 22.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms