RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 NOTUMQ6P988 496 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 LILRA6Q6PI73 481 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 PRSS55Q6UWB4 352 aaPredicted RBP6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CCNI2Q6ZMN8 369 aaPredicted RBP6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 SRGAP1Q7Z6B7 1085 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CDR2LQ86X02 465 aaPredicted RBP6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CEP57Q86XR8 500 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 C1QL4Q86Z23 238 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 GPR65Q8IYL9 337 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 PLD6Q8N2A8 252 aaKnown RBP6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 LRRN4CLQ8ND94 238 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 RDM1Q8NG50 284 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 ASAP3Q8TDY4 903 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 ING5Q8WYH8 240 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 DNASE1L2Q92874 299 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 ZC3H10Q96K80 434 aaKnown RBP6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 MBOAT7Q96N66 472 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 GPR62Q9BZJ7 368 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 NXF3Q9H4D5 531 aaKnown RBP6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 UBN1Q9NPG3 1134 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 TMEM9BQ9NQ34 198 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 LATS2Q9NRM7 1088 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 MIOSQ9NXC5 875 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 PARP2Q9UGN5 583 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 DDX25Q9UHL0 483 aaKnown RBP6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 SPTAN1Q13813 2472 aaKnown RBP6.15□□□□□ -1.43
SMARCE1P3-201ENST00000553649 CCDC163A0A0D9SF12 145 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 CASTOR2A6NHX0 329 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 SOWAHDA6NJG2 315 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 SLC37A4O43826 429 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 TSPAN1O60635 241 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 ECI2O75521 394 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 RPP40O75818 363 aaKnown RBP6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 NPTXRO95502 500 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 ECEL1O95672 775 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 MAOBP27338 520 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 HOXA9P31269 272 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 YWHABP31946 246 aaKnown RBP6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 QARSP47897 775 aaKnown RBP6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 RCAN1P53805 252 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 FAM193AP78312 1265 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 CYP4A11Q02928 519 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 DSC1Q08554 894 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 CTTNQ14247 550 aaKnown RBP6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 INF2Q27J81 1249 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 ZNF423Q2M1K9 1284 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 XKR9Q5GH70 373 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 RTP2Q5QGT7 225 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PPM1LQ5SGD2 360 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 FAM171A1Q5VUB5 890 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 NCAPH2Q6IBW4 605 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 Q6ZS52 159 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 DYMQ7RTS9 669 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PIP4P1Q86T03 277 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 FERMT3Q86UX7 667 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 HACE1Q8IYU2 909 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 FAM181AQ8N9Y4 354 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 CNNM3Q8NE01 707 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 ITFG1Q8TB96 612 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 ETNPPLQ8TBG4 499 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 FGF13Q92913 245 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 CCDC43Q96MW1 224 aaKnown RBP6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 LXNQ9BS40 222 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PHF20Q9BVI0 1012 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PLA2G2FQ9BZM2 168 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PRORYQ9H606 182 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 TRPV5Q9NQA5 729 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 CHST7Q9NS84 486 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 RGL1Q9NZL6 768 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 WRAP73Q9P2S5 460 aaPredicted RBP6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 DKK4Q9UBT3 224 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 ADAM28Q9UKQ2 775 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PCDHA4Q9UN74 947 aa6.14□□□□□ -1.43
SMARCE1P3-201ENST00000553649 COL4A2P08572 1712 aa6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 WDR81Q562E7 1941 aa6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 FBN2P35556 2912 aa6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 BCLAF3A2AJT9 711 aaKnown RBP6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 MAN2B1O00754 1011 aa6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 CPLX1O14810 134 aa6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 ADAM12O43184 909 aa6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 B4GALT5O43286 388 aa6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 AKAP3O75969 853 aa6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 CAVIN2O95810 425 aa6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PTMAP06454 111 aaKnown RBP6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 CFPP27918 469 aa6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 RIPPLY3P57055 190 aa6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 CREMQ03060 361 aa6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 SSRP1Q08945 709 aaKnown RBP6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 TFDP1Q14186 410 aa6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 HSP90AA2PQ14568 343 aaPredicted RBP6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PSMD5Q16401 504 aa6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 UAP1L1Q3KQV9 507 aa6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 KRTAP19-4Q3LI73 84 aa6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PLK5Q496M5 336 aa6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 BLOC1S2Q6QNY1 142 aa6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 B3GNT9Q6UX72 402 aa6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 LCNL1Q6ZST4 164 aa6.13□□□□□ -1.43
SMARCE1P3-201ENST00000553649 TPH2Q8IWU9 490 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms