RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 CTTNQ14247 550 aaKnown RBP9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 MAPRE1Q15691 268 aaKnown RBP9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 LRRC24Q50LG9 513 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 EFHC1Q5JVL4 640 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 C4orf50Q6ZRC1 276 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 ZNF560Q96MR9 790 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 APOL6Q9BWW8 343 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 ABCG4Q9H172 646 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 AP3M1Q9Y2T2 418 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 PIK3CDO00329 1044 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 TATP17735 454 aaPredicted RBP9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 AMPD1P23109 780 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 EIF3EP60228 445 aaKnown RBP9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 SHROOM1Q2M3G4 852 aaPredicted RBP9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 PABPC1LQ4VXU2 614 aaKnown RBP9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 EFCAB2Q5VUJ9 269 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 SHC4Q6S5L8 630 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 TMA16Q96EY4 203 aaKnown RBP9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 DGCR6LQ9BY27 220 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 SMARCAD1Q9H4L7 1026 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 ADGRF5Q8IZF2 1346 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 H2AFZP0C0S5 128 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 IL12AP29459 219 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 GTF2H1P32780 548 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 H2AFVQ71UI9 128 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 SNX20Q7Z614 316 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 LRRC47Q8N1G4 583 aaKnown RBP9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 MCUQ8NE86 351 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 RIN3Q8TB24 985 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 RASSF5Q8WWW0 418 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 ZNF594Q96JF6 807 aaPredicted RBP9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 COPS7BQ9H9Q2 264 aaPredicted RBP9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 AP4B1Q9Y6B7 739 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 H7C1D1 291 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 PIK3R2O00459 728 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 AIM2O14862 343 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 RNASEH1O60930 286 aaKnown RBP9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 CRCPO75575 148 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 S100A6P06703 90 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 POLR2MP0CAP2 368 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 PPP3CCP48454 512 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 HK2P52789 917 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 OSTNP61366 133 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 POLD3Q15054 466 aaPredicted RBP9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 IL31Q6EBC2 164 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 CNNM4Q6P4Q7 775 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 KLHL17Q6TDP4 642 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 RNF148Q8N7C7 305 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 CDK5RAP1Q96SZ6 601 aaKnown RBP9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 TTYH2Q9BSA4 534 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 IFT22Q9H7X7 185 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 TRAPPC10P48553 1259 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 GALNT11Q8NCW6 608 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 SDCCAG3Q96C92 435 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 TSSK1BQ9BXA7 367 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 UBA2Q9UBT2 640 aaPredicted RBP9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 LRFN2Q9ULH4 789 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 MROH7-TTC4A0A0A0MT08 1334 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 PHGDHO43175 533 aaKnown RBP9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 RD3LP0DJH9 198 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 ALDH1A3P47895 512 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 CDC16Q13042 620 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 SMAD4Q13485 552 aaKnown RBP9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 ZNF846Q147U1 533 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 NFIL3Q16649 462 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 BRDTQ58F21 947 aaPredicted RBP9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 HERC4Q5GLZ8 1057 aaPredicted RBP9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 ARMCX4Q5H9R4 360 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 KIAA1755Q5JYT7 1200 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 CYB5R4Q7L1T6 521 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 DHDDSQ86SQ9 333 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 MTFMTQ96DP5 389 aaKnown RBP9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 MTERF3Q96E29 417 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 MALT1Q9UDY8 824 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 RPH3AQ9Y2J0 694 aaPredicted RBP9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 A8MXQ7 604 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 ENO3P13929 434 aaPredicted RBP9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 ENPP1P22413 925 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 KCNJ1P48048 391 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 ZNF135P52742 658 aaPredicted RBP9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 MADCAM1Q13477 382 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 NR1I3Q14994 352 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 STILQ15468 1287 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 TAF1CQ15572 869 aaPredicted RBP9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 TXNRD1Q16881 649 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 TPTE2Q6XPS3 522 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 C7orf31Q8N865 590 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 TRIM15Q9C019 465 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 LACRTQ9GZZ8 138 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 KMT5AQ9NQR1 393 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 ATAD2BQ9ULI0 1458 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 TTC4O95801 387 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 CBX5P45973 191 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 PGDP52209 483 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 ACSBG2Q5FVE4 666 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 PAGE2BQ5JRK9 111 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 SLC22A16Q86VW1 577 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 AMIGO1Q86WK6 493 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 ERI1Q8IV48 349 aaKnown RBP9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 ZNF566Q969W8 418 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms