RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 TDGQ13569 410 aa24.18■■□□□ 1.46
TDP1-206ENST00000553569 KRT31Q15323 416 aa24.18■■□□□ 1.46
TDP1-206ENST00000553569 SKOR2Q2VWA4 1001 aaPredicted RBP24.18■■□□□ 1.46
TDP1-206ENST00000553569 GJB7Q6PEY0 223 aa24.18■■□□□ 1.46
TDP1-206ENST00000553569 TMEM150AQ86TG1 271 aa24.18■■□□□ 1.46
TDP1-206ENST00000553569 ZSCAN18Q8TBC5 510 aaPredicted RBP24.18■■□□□ 1.46
TDP1-206ENST00000553569 NXPE3Q969Y0 559 aa24.18■■□□□ 1.46
TDP1-206ENST00000553569 MYRFLQ96LU7 910 aa24.18■■□□□ 1.46
TDP1-206ENST00000553569 ASB16Q96NS5 453 aa24.18■■□□□ 1.46
TDP1-206ENST00000553569 FUCA2Q9BTY2 467 aa24.18■■□□□ 1.46
TDP1-206ENST00000553569 UBE2TQ9NPD8 197 aaPredicted RBP24.18■■□□□ 1.46
TDP1-206ENST00000553569 PATJQ8NI35 1801 aa24.18■■□□□ 1.46
TDP1-206ENST00000553569 NUP210Q8TEM1 1887 aaPredicted RBP24.17■■□□□ 1.46
TDP1-206ENST00000553569 MUC3AQ02505 3323 aa24.17■■□□□ 1.46
TDP1-206ENST00000553569 PON1P27169 355 aa24.17■■□□□ 1.46
TDP1-206ENST00000553569 NCAPHQ15003 741 aa24.17■■□□□ 1.46
TDP1-206ENST00000553569 ZMIZ2Q8NF64 920 aa24.17■■□□□ 1.46
TDP1-206ENST00000553569 MRPS31Q92665 395 aaKnown RBP24.17■■□□□ 1.46
TDP1-206ENST00000553569 SMARCD2Q92925 531 aa24.17■■□□□ 1.46
TDP1-206ENST00000553569 GPR88Q9GZN0 384 aa24.17■■□□□ 1.46
TDP1-206ENST00000553569 VPS16Q9H269 839 aa24.17■■□□□ 1.46
TDP1-206ENST00000553569 TASP1Q9H6P5 420 aa24.17■■□□□ 1.46
TDP1-206ENST00000553569 NARSO43776 548 aaKnown RBP24.16■■□□□ 1.46
TDP1-206ENST00000553569 TPM2P07951 284 aa24.16■■□□□ 1.46
TDP1-206ENST00000553569 FCARP24071 287 aa24.16■■□□□ 1.46
TDP1-206ENST00000553569 SLC5A3P53794 718 aa24.16■■□□□ 1.46
TDP1-206ENST00000553569 TANGO2Q6ICL3 276 aa24.16■■□□□ 1.46
TDP1-206ENST00000553569 CLEC20AQ6ZU45 233 aa24.16■■□□□ 1.46
TDP1-206ENST00000553569 GPIHBP1Q8IV16 184 aa24.16■■□□□ 1.46
TDP1-206ENST00000553569 NUP93Q8N1F7 819 aa24.16■■□□□ 1.46
TDP1-206ENST00000553569 SLC44A3Q8N4M1 653 aa24.16■■□□□ 1.46
TDP1-206ENST00000553569 RBBP8NLQ8NC74 664 aaPredicted RBP24.16■■□□□ 1.46
TDP1-206ENST00000553569 EDAQ92838 391 aa24.16■■□□□ 1.46
TDP1-206ENST00000553569 TTLL2Q9BWV7 592 aa24.16■■□□□ 1.46
TDP1-206ENST00000553569 TRPC7Q9HCX4 862 aa24.16■■□□□ 1.46
TDP1-206ENST00000553569 EHD2Q9NZN4 543 aa24.16■■□□□ 1.46
TDP1-206ENST00000553569 APEX2Q9UBZ4 518 aa24.16■■□□□ 1.46
TDP1-206ENST00000553569 MYO16Q9Y6X6 1858 aa24.15■■□□□ 1.46
TDP1-206ENST00000553569 KRT5P13647 590 aa24.15■■□□□ 1.46
TDP1-206ENST00000553569 NPR3P17342 541 aa24.15■■□□□ 1.46
TDP1-206ENST00000553569 GOLGA7BQ2TAP0 167 aa24.15■■□□□ 1.46
TDP1-206ENST00000553569 SGO2Q562F6 1265 aa24.15■■□□□ 1.46
TDP1-206ENST00000553569 ARHGAP17Q68EM7 881 aa24.15■■□□□ 1.46
TDP1-206ENST00000553569 TXNDC8Q6A555 127 aa24.15■■□□□ 1.46
TDP1-206ENST00000553569 UBALD2Q8IYN6 164 aa24.15■■□□□ 1.46
TDP1-206ENST00000553569 MAB21L3Q8N8X9 362 aa24.15■■□□□ 1.46
TDP1-206ENST00000553569 ANKRD20A12PQ8NF67 263 aa24.15■■□□□ 1.46
TDP1-206ENST00000553569 BPIFA3Q9BQP9 254 aa24.15■■□□□ 1.46
TDP1-206ENST00000553569 ZFP14Q9HCL3 533 aa24.15■■□□□ 1.46
TDP1-206ENST00000553569 CSNK1G1Q9HCP0 422 aa24.15■■□□□ 1.46
TDP1-206ENST00000553569 DUSP12Q9UNI6 340 aa24.15■■□□□ 1.46
TDP1-206ENST00000553569 ANAPC1Q9H1A4 1944 aa24.15■■□□□ 1.46
TDP1-206ENST00000553569 FAM86C2PA6NEL3 165 aa24.14■■□□□ 1.45
TDP1-206ENST00000553569 RTN3O95197 1032 aaPredicted RBP24.14■■□□□ 1.45
TDP1-206ENST00000553569 CALCAP01258 141 aa24.14■■□□□ 1.45
TDP1-206ENST00000553569 CDK11BP21127 795 aaKnown RBP24.14■■□□□ 1.45
TDP1-206ENST00000553569 YWHAQP27348 245 aa24.14■■□□□ 1.45
TDP1-206ENST00000553569 VIPR2P41587 438 aa24.14■■□□□ 1.45
TDP1-206ENST00000553569 ZNF165P49910 485 aa24.14■■□□□ 1.45
TDP1-206ENST00000553569 MFAP3P55082 362 aa24.14■■□□□ 1.45
TDP1-206ENST00000553569 ARHGAP44Q17R89 818 aa24.14■■□□□ 1.45
TDP1-206ENST00000553569 ZSCAN23Q3MJ62 389 aa24.14■■□□□ 1.45
TDP1-206ENST00000553569 DHX40Q8IX18 779 aaKnown RBP24.14■■□□□ 1.45
TDP1-206ENST00000553569 SCAMP5Q8TAC9 235 aa24.14■■□□□ 1.45
TDP1-206ENST00000553569 FBXO32Q969P5 355 aa24.14■■□□□ 1.45
TDP1-206ENST00000553569 ELSPBP1Q96BH3 223 aa24.14■■□□□ 1.45
TDP1-206ENST00000553569 SLC46A2Q9BY10 475 aa24.14■■□□□ 1.45
TDP1-206ENST00000553569 DUSP16Q9BY84 665 aa24.14■■□□□ 1.45
TDP1-206ENST00000553569 PLA2G2FQ9BZM2 168 aa24.14■■□□□ 1.45
TDP1-206ENST00000553569 SIX2Q9NPC8 291 aa24.14■■□□□ 1.45
TDP1-206ENST00000553569 RNF225M0QZC1 329 aaPredicted RBP24.13■■□□□ 1.45
TDP1-206ENST00000553569 TNFRSF10BO14763 440 aa24.13■■□□□ 1.45
TDP1-206ENST00000553569 ECI2O75521 394 aa24.13■■□□□ 1.45
TDP1-206ENST00000553569 PAEPP09466 180 aa24.13■■□□□ 1.45
TDP1-206ENST00000553569 VDRP11473 427 aa24.13■■□□□ 1.45
TDP1-206ENST00000553569 ZNF18P17022 549 aa24.13■■□□□ 1.45
TDP1-206ENST00000553569 DDX6P26196 483 aaKnown RBP eCLIP24.13■■□□□ 1.45
TDP1-206ENST00000553569 COPB1P53618 953 aaKnown RBP24.13■■□□□ 1.45
TDP1-206ENST00000553569 TAF10Q12962 218 aa24.13■■□□□ 1.45
TDP1-206ENST00000553569 GRM2Q14416 872 aa24.13■■□□□ 1.45
TDP1-206ENST00000553569 NFKBIBQ15653 356 aa24.13■■□□□ 1.45
TDP1-206ENST00000553569 ENOSF1Q7L5Y1 443 aa24.13■■□□□ 1.45
TDP1-206ENST00000553569 GPRIN1Q7Z2K8 1008 aa24.13■■□□□ 1.45
TDP1-206ENST00000553569 ARID3BQ8IVW6 561 aaPredicted RBP24.13■■□□□ 1.45
TDP1-206ENST00000553569 SLITRK1Q96PX8 696 aa24.13■■□□□ 1.45
TDP1-206ENST00000553569 LSM14BQ9BX40 385 aaKnown RBP24.13■■□□□ 1.45
TDP1-206ENST00000553569 SMG9Q9H0W8 520 aaKnown RBP24.13■■□□□ 1.45
TDP1-206ENST00000553569 HSD3B7Q9H2F3 369 aa24.13■■□□□ 1.45
TDP1-206ENST00000553569 TRPM5Q9NZQ8 1165 aa24.13■■□□□ 1.45
TDP1-206ENST00000553569 AJAP1Q9UKB5 411 aaPredicted RBP24.13■■□□□ 1.45
TDP1-206ENST00000553569 TSPAN16Q9UKR8 245 aa24.13■■□□□ 1.45
TDP1-206ENST00000553569 NCANO14594 1321 aa24.12■■□□□ 1.45
TDP1-206ENST00000553569 SMTNL1A8MU46 457 aa24.12■■□□□ 1.45
TDP1-206ENST00000553569 PRAMEF12O95522 483 aa24.12■■□□□ 1.45
TDP1-206ENST00000553569 ABL1P00519 1130 aa24.12■■□□□ 1.45
TDP1-206ENST00000553569 BRD2P25440 801 aaKnown RBP24.12■■□□□ 1.45
TDP1-206ENST00000553569 SIGLEC14Q08ET2 396 aa24.12■■□□□ 1.45
TDP1-206ENST00000553569 KCNMA1Q12791 1236 aa24.12■■□□□ 1.45
TDP1-206ENST00000553569 TFAP2BQ92481 460 aa24.12■■□□□ 1.45
TDP1-206ENST00000553569 FAM81BQ96LP2 452 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms