RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 SATB1Q01826 763 aa19.4■□□□□ 0.7
SHMT2-206ENST00000553529 ADAM9Q13443 819 aa19.4■□□□□ 0.7
SHMT2-206ENST00000553529 FUKQ8N0W3 1084 aa19.4■□□□□ 0.7
SHMT2-206ENST00000553529 ZMIZ2Q8NF64 920 aa19.4■□□□□ 0.7
SHMT2-206ENST00000553529 OSBPL6Q9BZF3 934 aa19.4■□□□□ 0.7
SHMT2-206ENST00000553529 TDP1Q9NUW8 608 aa19.4■□□□□ 0.7
SHMT2-206ENST00000553529 SMPD4Q9NXE4 827 aa19.4■□□□□ 0.7
SHMT2-206ENST00000553529 FANCMQ8IYD8 2048 aa19.4■□□□□ 0.7
SHMT2-206ENST00000553529 ABL1P00519 1130 aa19.39■□□□□ 0.69
SHMT2-206ENST00000553529 CKMP06732 381 aa19.39■□□□□ 0.69
SHMT2-206ENST00000553529 FAM160A1Q05DH4 1040 aa19.39■□□□□ 0.69
SHMT2-206ENST00000553529 TAF10Q12962 218 aa19.39■□□□□ 0.69
SHMT2-206ENST00000553529 ZNF77Q15935 545 aa19.39■□□□□ 0.69
SHMT2-206ENST00000553529 ARHGAP29Q52LW3 1261 aa19.39■□□□□ 0.69
SHMT2-206ENST00000553529 ANKRD40Q6AI12 368 aa19.39■□□□□ 0.69
SHMT2-206ENST00000553529 VSTM1Q6UX27 236 aa19.39■□□□□ 0.69
SHMT2-206ENST00000553529 DENND5BQ6ZUT9 1274 aa19.39■□□□□ 0.69
SHMT2-206ENST00000553529 GPRIN1Q7Z2K8 1008 aa19.39■□□□□ 0.69
SHMT2-206ENST00000553529 WHAMMQ8TF30 809 aa19.39■□□□□ 0.69
SHMT2-206ENST00000553529 NKD2Q969F2 451 aaPredicted RBP19.39■□□□□ 0.69
SHMT2-206ENST00000553529 WBP2Q969T9 261 aa19.39■□□□□ 0.69
SHMT2-206ENST00000553529 JAKMIP2Q96AA8 810 aa19.39■□□□□ 0.69
SHMT2-206ENST00000553529 E2F7Q96AV8 911 aa19.39■□□□□ 0.69
SHMT2-206ENST00000553529 SPATA17Q96L03 361 aa19.39■□□□□ 0.69
SHMT2-206ENST00000553529 SMOQ99835 787 aa19.39■□□□□ 0.69
SHMT2-206ENST00000553529 ARID3AQ99856 593 aa19.39■□□□□ 0.69
SHMT2-206ENST00000553529 MED10Q9BTT4 135 aa19.39■□□□□ 0.69
SHMT2-206ENST00000553529 LINC00597Q9H2U6 94 aa19.39■□□□□ 0.69
SHMT2-206ENST00000553529 KRT82Q9NSB4 513 aa19.39■□□□□ 0.69
SHMT2-206ENST00000553529 OBP2AQ9NY56 170 aa19.39■□□□□ 0.69
SHMT2-206ENST00000553529 LAMTOR5O43504 91 aa19.38■□□□□ 0.69
SHMT2-206ENST00000553529 TDGF1P13385 188 aa19.38■□□□□ 0.69
SHMT2-206ENST00000553529 CD58P19256 250 aa19.38■□□□□ 0.69
SHMT2-206ENST00000553529 BMP6P22004 513 aa19.38■□□□□ 0.69
SHMT2-206ENST00000553529 ANXA13P27216 316 aa19.38■□□□□ 0.69
SHMT2-206ENST00000553529 ADORA2BP29275 332 aa19.38■□□□□ 0.69
SHMT2-206ENST00000553529 WEE1P30291 646 aa19.38■□□□□ 0.69
SHMT2-206ENST00000553529 NOP14P78316 857 aaKnown RBP19.38■□□□□ 0.69
SHMT2-206ENST00000553529 USP4Q13107 963 aa19.38■□□□□ 0.69
SHMT2-206ENST00000553529 MTF1Q14872 753 aa19.38■□□□□ 0.69
SHMT2-206ENST00000553529 NFIL3Q16649 462 aa19.38■□□□□ 0.69
SHMT2-206ENST00000553529 DCLK2Q8N568 766 aa19.38■□□□□ 0.69
SHMT2-206ENST00000553529 SLC2A14Q8TDB8 520 aa19.38■□□□□ 0.69
SHMT2-206ENST00000553529 SH3RF2Q8TEC5 729 aa19.38■□□□□ 0.69
SHMT2-206ENST00000553529 CCDC47Q96A33 483 aaKnown RBP19.38■□□□□ 0.69
SHMT2-206ENST00000553529 C8orf48Q96LL4 319 aa19.38■□□□□ 0.69
SHMT2-206ENST00000553529 CHRDQ9H2X0 955 aa19.38■□□□□ 0.69
SHMT2-206ENST00000553529 MAN1B1Q9UKM7 699 aa19.38■□□□□ 0.69
SHMT2-206ENST00000553529 MYO16Q9Y6X6 1858 aa19.37■□□□□ 0.69
SHMT2-206ENST00000553529 ZNF840PA6NDX5 716 aa19.37■□□□□ 0.69
SHMT2-206ENST00000553529 GOLGA6L4A6NEF3 574 aa19.37■□□□□ 0.69
SHMT2-206ENST00000553529 MAN2B1O00754 1011 aa19.37■□□□□ 0.69
SHMT2-206ENST00000553529 RUNX3Q13761 415 aa19.37■□□□□ 0.69
SHMT2-206ENST00000553529 MAPRE1Q15691 268 aaKnown RBP19.37■□□□□ 0.69
SHMT2-206ENST00000553529 SGSM1Q2NKQ1 1148 aa19.37■□□□□ 0.69
SHMT2-206ENST00000553529 CBWD6Q4V339 395 aa19.37■□□□□ 0.69
SHMT2-206ENST00000553529 CBWD3Q5JTY5 395 aa19.37■□□□□ 0.69
SHMT2-206ENST00000553529 CBWD5Q5RIA9 395 aa19.37■□□□□ 0.69
SHMT2-206ENST00000553529 ZNF658Q5TYW1 1059 aaPredicted RBP19.37■□□□□ 0.69
SHMT2-206ENST00000553529 FSTL4Q6MZW2 842 aa19.37■□□□□ 0.69
SHMT2-206ENST00000553529 ADSSL1Q8N142 457 aa19.37■□□□□ 0.69
SHMT2-206ENST00000553529 EZH1Q92800 747 aaPredicted RBP19.37■□□□□ 0.69
SHMT2-206ENST00000553529 TTLL2Q9BWV7 592 aa19.37■□□□□ 0.69
SHMT2-206ENST00000553529 ELOVL4Q9GZR5 314 aa19.37■□□□□ 0.69
SHMT2-206ENST00000553529 IRF2BPLQ9H1B7 796 aa19.37■□□□□ 0.69
SHMT2-206ENST00000553529 PRMT8Q9NR22 394 aaPredicted RBP19.37■□□□□ 0.69
SHMT2-206ENST00000553529 CHORDC1Q9UHD1 332 aaPredicted RBP19.37■□□□□ 0.69
SHMT2-206ENST00000553529 F5P12259 2224 aa19.37■□□□□ 0.69
SHMT2-206ENST00000553529 TRAV19A0A0A6YYK7 116 aa19.36■□□□□ 0.69
SHMT2-206ENST00000553529 BIN1O00499 593 aa19.36■□□□□ 0.69
SHMT2-206ENST00000553529 TRIM66O15016 1216 aa19.36■□□□□ 0.69
SHMT2-206ENST00000553529 PSMC2P35998 433 aaKnown RBP19.36■□□□□ 0.69
SHMT2-206ENST00000553529 RPS9P46781 194 aaKnown RBP19.36■□□□□ 0.69
SHMT2-206ENST00000553529 AP3M2P53677 418 aa19.36■□□□□ 0.69
SHMT2-206ENST00000553529 SRSF5Q13243 272 aaKnown RBP19.36■□□□□ 0.69
SHMT2-206ENST00000553529 ITPRIPL2Q3MIP1 535 aa19.36■□□□□ 0.69
SHMT2-206ENST00000553529 ZNF394Q53GI3 561 aa19.36■□□□□ 0.69
SHMT2-206ENST00000553529 SFTPA1Q8IWL2 248 aa19.36■□□□□ 0.69
SHMT2-206ENST00000553529 SPATA20Q8TB22 786 aa19.36■□□□□ 0.69
SHMT2-206ENST00000553529 TATDN2Q93075 761 aa19.36■□□□□ 0.69
SHMT2-206ENST00000553529 GMIPQ9P107 970 aa19.36■□□□□ 0.69
SHMT2-206ENST00000553529 UXTQ9UBK9 157 aaPredicted RBP19.36■□□□□ 0.69
SHMT2-206ENST00000553529 MRPS17Q9Y2R5 130 aaKnown RBP19.36■□□□□ 0.69
SHMT2-206ENST00000553529 ZFHX2Q9C0A1 2572 aaPredicted RBP19.36■□□□□ 0.69
SHMT2-206ENST00000553529 TNFRSF10BO14763 440 aa19.35■□□□□ 0.69
SHMT2-206ENST00000553529 IKBKBO14920 756 aa19.35■□□□□ 0.69
SHMT2-206ENST00000553529 MAPK13O15264 365 aa19.35■□□□□ 0.69
SHMT2-206ENST00000553529 AP1G2O75843 785 aa19.35■□□□□ 0.69
SHMT2-206ENST00000553529 EGFP01133 1207 aa19.35■□□□□ 0.69
SHMT2-206ENST00000553529 USP17L7P0C7H9 530 aa19.35■□□□□ 0.69
SHMT2-206ENST00000553529 KRT13P13646 458 aa19.35■□□□□ 0.69
SHMT2-206ENST00000553529 HDCP19113 662 aa19.35■□□□□ 0.69
SHMT2-206ENST00000553529 DDX6P26196 483 aaKnown RBP eCLIP19.35■□□□□ 0.69
SHMT2-206ENST00000553529 SLC5A3P53794 718 aa19.35■□□□□ 0.69
SHMT2-206ENST00000553529 MAP3K7CLP57077 242 aa19.35■□□□□ 0.69
SHMT2-206ENST00000553529 DCAF17Q5H9S7 520 aaPredicted RBP19.35■□□□□ 0.69
SHMT2-206ENST00000553529 INTS8Q75QN2 995 aaKnown RBP19.35■□□□□ 0.69
SHMT2-206ENST00000553529 SMARCE1Q969G3 411 aa19.35■□□□□ 0.69
SHMT2-206ENST00000553529 NELL2Q99435 816 aa19.35■□□□□ 0.69
SHMT2-206ENST00000553529 CCSER2Q9H7U1 834 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms